RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 KRTAP19-5Q3LI72 72 aa4.93□□□□□ -1.62
USB1-205ENST00000561743 MT1GP13640 62 aa4.88□□□□□ -1.63
USB1-205ENST00000561743 A8MU10 97 aa4.86□□□□□ -1.63
USB1-205ENST00000561743 KRTAP4-9Q9BYQ8 210 aa4.86□□□□□ -1.63
USB1-205ENST00000561743 A6NED7 52 aa4.85□□□□□ -1.63
USB1-205ENST00000561743 BRK1Q8WUW1 75 aa4.85□□□□□ -1.63
USB1-205ENST00000561743 KRTAP4-7Q9BYR0 210 aa4.85□□□□□ -1.63
USB1-205ENST00000561743 PRO0628Q9UI54 55 aa4.84□□□□□ -1.63
USB1-205ENST00000561743 PP632Q6XCG6 107 aa4.83□□□□□ -1.64
USB1-205ENST00000561743 UQCR11O14957 56 aa4.82□□□□□ -1.64
USB1-205ENST00000561743 LCE1DQ5T752 114 aa4.81□□□□□ -1.64
USB1-205ENST00000561743 MT1MQ8N339 61 aa4.81□□□□□ -1.64
USB1-205ENST00000561743 MT1LQ93083 61 aa4.81□□□□□ -1.64
USB1-205ENST00000561743 CDC42SE1Q9NRR8 79 aa4.8□□□□□ -1.64
USB1-205ENST00000561743 LCE3AQ5TA76 89 aa4.78□□□□□ -1.64
USB1-205ENST00000561743 C10orf95Q9H7T3 257 aa4.78□□□□□ -1.64
USB1-205ENST00000561743 TNP1P09430 55 aa4.76□□□□□ -1.65
USB1-205ENST00000561743 MIR22HGQ0VDD5 57 aa4.74□□□□□ -1.65
USB1-205ENST00000561743 GPR98Q8WXG9 6306 aa4.71□□□□□ -1.65
USB1-205ENST00000561743 LCE4AQ5TA78 99 aa4.7□□□□□ -1.66
USB1-205ENST00000561743 KRTAP4-3Q9BYR4 195 aa4.7□□□□□ -1.66
USB1-205ENST00000561743 MT4P47944 62 aa4.68□□□□□ -1.66
USB1-205ENST00000561743 HMCN1Q96RW7 5635 aa4.66□□□□□ -1.66
USB1-205ENST00000561743 K7ERS5 55 aa4.65□□□□□ -1.67
USB1-205ENST00000561743 PMAIP1Q13794 54 aa4.64□□□□□ -1.67
USB1-205ENST00000561743 KRTAP5-4Q6L8H1 288 aa4.64□□□□□ -1.67
USB1-205ENST00000561743 KRTAP4-2Q9BYR5 136 aa4.62□□□□□ -1.67
USB1-205ENST00000561743 KRTAP12-3P60328 96 aa4.59□□□□□ -1.67
USB1-205ENST00000561743 A0A0A0MQY5 61 aa4.5□□□□□ -1.69
USB1-205ENST00000561743 AHNAK2Q8IVF2 5795 aa4.48□□□□□ -1.69
USB1-205ENST00000561743 KRTAP4-11Q9BYQ6 195 aa4.47□□□□□ -1.69
USB1-205ENST00000561743 KRTAP23-1A1A580 65 aa4.45□□□□□ -1.7
USB1-205ENST00000561743 KRTAP25-1Q3LHN0 102 aa4.45□□□□□ -1.7
USB1-205ENST00000561743 KRTAP5-10Q6L8G5 202 aa4.45□□□□□ -1.7
USB1-205ENST00000561743 KTN1-AS1Q86SY8 53 aa4.45□□□□□ -1.7
USB1-205ENST00000561743 KRTAP5-5Q701N2 237 aaPredicted RBP4.43□□□□□ -1.7
USB1-205ENST00000561743 KRTAP20-2Q3LI61 65 aa4.37□□□□□ -1.71
USB1-205ENST00000561743 ROMO1P60602 79 aa4.35□□□□□ -1.71
USB1-205ENST00000561743 SPRR5A0A1B0GTR4 108 aa4.33□□□□□ -1.72
USB1-205ENST00000561743 KRTAP5-3Q6L8H2 238 aa4.33□□□□□ -1.72
USB1-205ENST00000561743 KRTAP19-4Q3LI73 84 aa4.32□□□□□ -1.72
USB1-205ENST00000561743 KRTAP12-4P60329 112 aa4.29□□□□□ -1.72
USB1-205ENST00000561743 KRTAP5-7Q6L8G8 165 aa4.28□□□□□ -1.72
USB1-205ENST00000561743 KRTAP15-1Q3LI76 137 aa4.26□□□□□ -1.73
USB1-205ENST00000561743 LCE3CQ5T5A8 94 aa4.22□□□□□ -1.73
USB1-205ENST00000561743 PRAC1Q96KF2 57 aa4.22□□□□□ -1.73
USB1-205ENST00000561743 SYNE1Q8NF91 8797 aaKnown RBP4.19□□□□□ -1.74
USB1-205ENST00000561743 MT1AP04731 61 aa4.08□□□□□ -1.76
USB1-205ENST00000561743 KRTAP6-1Q3LI64 71 aa4.07□□□□□ -1.76
USB1-205ENST00000561743 KRTAP5-2Q701N4 177 aa4.05□□□□□ -1.76
USB1-205ENST00000561743 KRTAP9-6A8MVA2 160 aa4.01□□□□□ -1.77
USB1-205ENST00000561743 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.79
USB1-205ENST00000561743 KRTAP5-8O75690 187 aa3.88□□□□□ -1.79
USB1-205ENST00000561743 OBSCNQ5VST9 7968 aa3.78□□□□□ -1.8
USB1-205ENST00000561743 MT3P25713 68 aa3.72□□□□□ -1.81
USB1-205ENST00000561743 MUC5ACP98088 5654 aa3.71□□□□□ -1.82
USB1-205ENST00000561743 MUC5BQ9HC84 5762 aaPredicted RBP3.71□□□□□ -1.82
USB1-205ENST00000561743 AHNAKQ09666 5890 aaKnown RBP3.67□□□□□ -1.82
USB1-205ENST00000561743 KRTAP5-1Q6L8H4 278 aa3.65□□□□□ -1.83
USB1-205ENST00000561743 LUZP6Q538Z0 58 aa3.57□□□□□ -1.84
USB1-205ENST00000561743 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
USB1-205ENST00000561743 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
USB1-205ENST00000561743 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
USB1-205ENST00000561743 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
USB1-205ENST00000561743 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.16□□□□□ -1.9
USB1-205ENST00000561743 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
USB1-205ENST00000561743 INE1O15225 51 aa2.97□□□□□ -1.93
USB1-205ENST00000561743 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
USB1-205ENST00000561743 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
USB1-205ENST00000561743 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
USB1-205ENST00000561743 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
USB1-205ENST00000561743 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
USB1-205ENST00000561743 PHGR1C9JFL3 82 aa2.58□□□□□ -2
USB1-205ENST00000561743 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
USB1-205ENST00000561743 PRM1P04553 51 aa2.23□□□□□ -2.05
USB1-205ENST00000561743 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
USB1-205ENST00000561743 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 10 ms