RNA–Protein interactions for RNA: ENST00000561212.5

ZEB1-222, Transcript of zinc finger E-box binding homeobox 1, human

TSL 5

Gene ZEB1, Length 1,500 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-222	ENST00000561212	PLAC4	Q8WY50	150 aa		3.16	□□□□□ -1.9
ZEB1-222	ENST00000561212	PP632	Q6XCG6	107 aa		3.14	□□□□□ -1.91
ZEB1-222	ENST00000561212	TNP1	P09430	55 aa		3.12	□□□□□ -1.91
ZEB1-222	ENST00000561212	USH2A	O75445	5202 aa		3.11	□□□□□ -1.91
ZEB1-222	ENST00000561212	MT1X	P80297	61 aa		3.06	□□□□□ -1.92
ZEB1-222	ENST00000561212	KRTAP10-5	P60370	271 aa		3.05	□□□□□ -1.92
ZEB1-222	ENST00000561212	LUZP6	Q538Z0	58 aa		3.05	□□□□□ -1.92
ZEB1-222	ENST00000561212	SSPO	A2VEC9	5147 aa		3	□□□□□ -1.93
ZEB1-222	ENST00000561212	KRTAP19-6	Q3LI70	58 aa		2.98	□□□□□ -1.93
ZEB1-222	ENST00000561212	PRO2289	Q9P1D8	64 aa		2.97	□□□□□ -1.93
ZEB1-222	ENST00000561212	LCE3A	Q5TA76	89 aa		2.95	□□□□□ -1.94
ZEB1-222	ENST00000561212	NDUFAF8	A1L188	74 aa		2.94	□□□□□ -1.94
ZEB1-222	ENST00000561212	OBSCN	Q5VST9	7968 aa		2.94	□□□□□ -1.94
ZEB1-222	ENST00000561212	MT3	P25713	68 aa		2.93	□□□□□ -1.94
ZEB1-222	ENST00000561212	KRTAP8-1	Q8IUC2	63 aa		2.93	□□□□□ -1.94
ZEB1-222	ENST00000561212	KRTAP10-12	P60413	245 aa		2.92	□□□□□ -1.94
ZEB1-222	ENST00000561212	FSIP2	Q5CZC0	6907 aa		2.9	□□□□□ -1.94
ZEB1-222	ENST00000561212	KRTAP5-2	Q701N4	177 aa		2.89	□□□□□ -1.95
ZEB1-222	ENST00000561212	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	2.89	□□□□□ -1.95
ZEB1-222	ENST00000561212	SPRR5	A0A1B0GTR4	108 aa		2.86	□□□□□ -1.95
ZEB1-222	ENST00000561212	KRTAP4-3	Q9BYR4	195 aa		2.85	□□□□□ -1.95
ZEB1-222	ENST00000561212	KRTAP12-3	P60328	96 aa		2.84	□□□□□ -1.95
ZEB1-222	ENST00000561212	KMT2D	O14686	5537 aa		2.83	□□□□□ -1.96
ZEB1-222	ENST00000561212	CRCT1	Q9UGL9	99 aa		2.82	□□□□□ -1.96
ZEB1-222	ENST00000561212	KRTAP19-5	Q3LI72	72 aa		2.76	□□□□□ -1.97
ZEB1-222	ENST00000561212	KRTAP19-7	Q3SYF9	63 aa		2.75	□□□□□ -1.97
ZEB1-222	ENST00000561212	LCE1F	Q5T754	118 aa		2.73	□□□□□ -1.97
ZEB1-222	ENST00000561212	KRTAP9-6	A8MVA2	160 aa		2.71	□□□□□ -1.98
ZEB1-222	ENST00000561212	MT1E	P04732	61 aa		2.67	□□□□□ -1.98
ZEB1-222	ENST00000561212	LCE3C	Q5T5A8	94 aa		2.67	□□□□□ -1.98
ZEB1-222	ENST00000561212	MACF1	Q9UPN3	7388 aa	Known RBP	2.65	□□□□□ -1.99
ZEB1-222	ENST00000561212	MUC12	Q9UKN1	5478 aa		2.62	□□□□□ -1.99
ZEB1-222	ENST00000561212	MT1L	Q93083	61 aa		2.62	□□□□□ -1.99
ZEB1-222	ENST00000561212	SYNE2	Q8WXH0	6885 aa	Known RBP	2.58	□□□□□ -2
ZEB1-222	ENST00000561212	SPRR2F	Q96RM1	72 aa		2.58	□□□□□ -2
ZEB1-222	ENST00000561212	INE1	O15225	51 aa		2.57	□□□□□ -2
ZEB1-222	ENST00000561212	KRTAP6-3	Q3LI67	103 aa		2.56	□□□□□ -2
ZEB1-222	ENST00000561212	KRTAP19-3	Q7Z4W3	81 aa		2.56	□□□□□ -2
ZEB1-222	ENST00000561212	MDN1	Q9NU22	5596 aa		2.54	□□□□□ -2
ZEB1-222	ENST00000561212	MT1G	P13640	62 aa		2.53	□□□□□ -2
ZEB1-222	ENST00000561212	MT1M	Q8N339	61 aa		2.52	□□□□□ -2.01
ZEB1-222	ENST00000561212	KRTAP5-8	O75690	187 aa		2.49	□□□□□ -2.01
ZEB1-222	ENST00000561212	SPRR2E	P22531	72 aa		2.43	□□□□□ -2.02
ZEB1-222	ENST00000561212	SPRR2B	P35325	72 aa		2.43	□□□□□ -2.02
ZEB1-222	ENST00000561212	SPRR2A	P35326	72 aa		2.43	□□□□□ -2.02
ZEB1-222	ENST00000561212	KRTAP2-3	P0C7H8	128 aa		2.42	□□□□□ -2.02
ZEB1-222	ENST00000561212	KRTAP2-4	Q9BYR9	128 aa		2.42	□□□□□ -2.02
ZEB1-222	ENST00000561212	KRTAP2-1	Q9BYU5	128 aa		2.42	□□□□□ -2.02
ZEB1-222	ENST00000561212	DST	Q03001	7570 aa	Known RBP	2.38	□□□□□ -2.03
ZEB1-222	ENST00000561212	NEB	P20929	6669 aa		2.35	□□□□□ -2.03
ZEB1-222	ENST00000561212	HMCN1	Q96RW7	5635 aa		2.35	□□□□□ -2.03
ZEB1-222	ENST00000561212	LCE3E	Q5T5B0	92 aa		2.35	□□□□□ -2.03
ZEB1-222	ENST00000561212	SPRR2D	P22532	72 aa		2.34	□□□□□ -2.03
ZEB1-222	ENST00000561212	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.32	□□□□□ -2.04
ZEB1-222	ENST00000561212	MT1A	P04731	61 aa		2.22	□□□□□ -2.05
ZEB1-222	ENST00000561212	KRTAP6-1	Q3LI64	71 aa		2.21	□□□□□ -2.06
ZEB1-222	ENST00000561212	SYNE1	Q8NF91	8797 aa	Known RBP	2.2	□□□□□ -2.06
ZEB1-222	ENST00000561212	KRTAP20-1	Q3LI63	56 aa		2.17	□□□□□ -2.06
ZEB1-222	ENST00000561212	KRTAP12-4	P60329	112 aa		2.07	□□□□□ -2.08
ZEB1-222	ENST00000561212	KRTAP20-2	Q3LI61	65 aa		2.04	□□□□□ -2.08
ZEB1-222	ENST00000561212	MT4	P47944	62 aa		2.03	□□□□□ -2.08
ZEB1-222	ENST00000561212	LCE1C	Q5T751	118 aa		2.03	□□□□□ -2.08
ZEB1-222	ENST00000561212	LCE1B	Q5T7P3	118 aa		2.03	□□□□□ -2.08
ZEB1-222	ENST00000561212	LCE3D	Q9BYE3	92 aa		2.02	□□□□□ -2.09
ZEB1-222	ENST00000561212	KRTAP6-2	Q3LI66	62 aa		2.01	□□□□□ -2.09
ZEB1-222	ENST00000561212	MUC19	Q7Z5P9	8384 aa		1.84	□□□□□ -2.11
ZEB1-222	ENST00000561212	PRM1	P04553	51 aa		1.8	□□□□□ -2.12
ZEB1-222	ENST00000561212	AHNAK2	Q8IVF2	5795 aa		1.79	□□□□□ -2.12
ZEB1-222	ENST00000561212	GPR98	Q8WXG9	6306 aa		1.76	□□□□□ -2.13
ZEB1-222	ENST00000561212	KRTAP5-10	Q6L8G5	202 aa		1.74	□□□□□ -2.13
ZEB1-222	ENST00000561212	KRTAP5-7	Q6L8G8	165 aa		1.7	□□□□□ -2.14
ZEB1-222	ENST00000561212	MUC5AC	P98088	5654 aa		1.69	□□□□□ -2.14
ZEB1-222	ENST00000561212	KRTAP21-2	Q3LI59	83 aa		1.5	□□□□□ -2.17
ZEB1-222	ENST00000561212	MUC5B	Q9HC84	5762 aa	Predicted RBP	1.46	□□□□□ -2.18
ZEB1-222	ENST00000561212	AHNAK	Q09666	5890 aa	Known RBP	1.42	□□□□□ -2.18
ZEB1-222	ENST00000561212	PHGR1	C9JFL3	82 aa		1.25	□□□□□ -2.21
ZEB1-222	ENST00000561212	KRTAP21-1	Q3LI58	79 aa		1.14	□□□□□ -2.23
ZEB1-222	ENST00000561212	MUC16	Q8WXI7	14507 aa		0.81	□□□□□ -2.28

Retrieved 78 of 20,778 RNA–protein pairs in 41 ms