RNA–Protein interactions for RNA: ENST00000560952.1

RNF111-211, Transcript of ring finger protein 111, humanhuman

TSL 1 (best)

Gene RNF111, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-211ENST00000560952 DEFB108BQ8NET1 73 aa0.99□□□□□ -2.25
RNF111-211ENST00000560952 VPS13DQ5THJ4 4388 aa0.99□□□□□ -2.25
RNF111-211ENST00000560952 DEFB110Q30KQ9 67 aa0.98□□□□□ -2.25
RNF111-211ENST00000560952 KMT2DO14686 5537 aa0.98□□□□□ -2.25
RNF111-211ENST00000560952 DSTQ03001 7570 aaKnown RBP0.98□□□□□ -2.25
RNF111-211ENST00000560952 KRTAP20-1Q3LI63 56 aa0.98□□□□□ -2.25
RNF111-211ENST00000560952 DEFB136Q30KP8 78 aa0.97□□□□□ -2.25
RNF111-211ENST00000560952 DEFB133Q30KQ1 61 aa0.97□□□□□ -2.25
RNF111-211ENST00000560952 FCGBPQ9Y6R7 5405 aaPredicted RBP0.97□□□□□ -2.25
RNF111-211ENST00000560952 DNAH17Q9UFH2 4485 aa0.96□□□□□ -2.26
RNF111-211ENST00000560952 A0A096LNI7 61 aa0.95□□□□□ -2.26
RNF111-211ENST00000560952 KRTAP13-1Q8IUC0 172 aa0.95□□□□□ -2.26
RNF111-211ENST00000560952 USH2AO75445 5202 aa0.95□□□□□ -2.26
RNF111-211ENST00000560952 LRP1BQ9NZR2 4599 aa0.95□□□□□ -2.26
RNF111-211ENST00000560952 H3BUX3 64 aa0.95□□□□□ -2.26
RNF111-211ENST00000560952 KRTAP12-4P60329 112 aa0.95□□□□□ -2.26
RNF111-211ENST00000560952 DNAH5Q8TE73 4624 aa0.94□□□□□ -2.26
RNF111-211ENST00000560952 MUC12Q9UKN1 5478 aa0.94□□□□□ -2.26
RNF111-211ENST00000560952 SPINK6Q6UWN8 80 aa0.94□□□□□ -2.26
RNF111-211ENST00000560952 M0QZ58 72 aa0.93□□□□□ -2.26
RNF111-211ENST00000560952 TNXBP22105 4242 aa0.91□□□□□ -2.26
RNF111-211ENST00000560952 LPAP08519 4548 aa0.89□□□□□ -2.27
RNF111-211ENST00000560952 A0A096LPF7 62 aa0.89□□□□□ -2.27
RNF111-211ENST00000560952 MDN1Q9NU22 5596 aa0.88□□□□□ -2.27
RNF111-211ENST00000560952 SPART-AS1P0CW21 52 aa0.87□□□□□ -2.27
RNF111-211ENST00000560952 KRTAP2-3P0C7H8 128 aa0.86□□□□□ -2.27
RNF111-211ENST00000560952 KRTAP10-4P60372 401 aaPredicted RBP0.86□□□□□ -2.27
RNF111-211ENST00000560952 KRTAP4-1Q9BYQ7 146 aa0.86□□□□□ -2.27
RNF111-211ENST00000560952 KRTAP2-4Q9BYR9 128 aa0.86□□□□□ -2.27
RNF111-211ENST00000560952 DEFB135Q30KP9 77 aa0.85□□□□□ -2.27
RNF111-211ENST00000560952 DNAH8Q96JB1 4490 aa0.85□□□□□ -2.27
RNF111-211ENST00000560952 TNP1P09430 55 aa0.84□□□□□ -2.27
RNF111-211ENST00000560952 SMR3BP02814 79 aaPredicted RBP0.83□□□□□ -2.28
RNF111-211ENST00000560952 KRTAP12-3P60328 96 aa0.81□□□□□ -2.28
RNF111-211ENST00000560952 KRTAP2-1Q9BYU5 128 aa0.8□□□□□ -2.28
RNF111-211ENST00000560952 M0R2T5 61 aa0.8□□□□□ -2.28
RNF111-211ENST00000560952 MUC17Q685J3 4493 aa0.79□□□□□ -2.28
RNF111-211ENST00000560952 LINC01556Q5JQF7 62 aa0.79□□□□□ -2.28
RNF111-211ENST00000560952 H3BNG1 76 aa0.79□□□□□ -2.28
RNF111-211ENST00000560952 MT1HL1P0DM35 61 aa0.79□□□□□ -2.28
RNF111-211ENST00000560952 KRTAP5-10Q6L8G5 202 aa0.79□□□□□ -2.28
RNF111-211ENST00000560952 C9orf92A6NGG3 77 aa0.76□□□□□ -2.29
RNF111-211ENST00000560952 HTN3P15516 51 aa0.76□□□□□ -2.29
RNF111-211ENST00000560952 DEFB4AO15263 64 aa0.72□□□□□ -2.29
RNF111-211ENST00000560952 PRM1P04553 51 aa0.72□□□□□ -2.29
RNF111-211ENST00000560952 KRTAP8-1Q8IUC2 63 aa0.72□□□□□ -2.29
RNF111-211ENST00000560952 FLGP20930 4061 aaPredicted RBP0.72□□□□□ -2.29
RNF111-211ENST00000560952 KRTAP19-6Q3LI70 58 aa0.7□□□□□ -2.3
RNF111-211ENST00000560952 RPS29P62273 56 aaKnown RBP0.7□□□□□ -2.3
RNF111-211ENST00000560952 MT1HP80294 61 aa0.7□□□□□ -2.3
RNF111-211ENST00000560952 SPRR2EP22531 72 aa0.68□□□□□ -2.3
RNF111-211ENST00000560952 SPRR2BP35325 72 aa0.68□□□□□ -2.3
RNF111-211ENST00000560952 SPRR2AP35326 72 aa0.68□□□□□ -2.3
RNF111-211ENST00000560952 SPRR2DP22532 72 aa0.66□□□□□ -2.3
RNF111-211ENST00000560952 KRTAP19-2Q3LHN2 52 aa0.64□□□□□ -2.31
RNF111-211ENST00000560952 MT4P47944 62 aa0.63□□□□□ -2.31
RNF111-211ENST00000560952 KRTAP19-3Q7Z4W3 81 aa0.62□□□□□ -2.31
RNF111-211ENST00000560952 SPRR2FQ96RM1 72 aa0.62□□□□□ -2.31
RNF111-211ENST00000560952 SYNE1Q8NF91 8797 aaKnown RBP0.61□□□□□ -2.31
RNF111-211ENST00000560952 KRTAP19-5Q3LI72 72 aa0.61□□□□□ -2.31
RNF111-211ENST00000560952 MT1AP04731 61 aa0.58□□□□□ -2.32
RNF111-211ENST00000560952 KRTAP6-2Q3LI66 62 aa0.57□□□□□ -2.32
RNF111-211ENST00000560952 MT2AP02795 61 aa0.56□□□□□ -2.32
RNF111-211ENST00000560952 MT1FP04733 61 aa0.56□□□□□ -2.32
RNF111-211ENST00000560952 KRTAP21-1Q3LI58 79 aa0.52□□□□□ -2.33
RNF111-211ENST00000560952 PHGR1C9JFL3 82 aa0.48□□□□□ -2.33
RNF111-211ENST00000560952 KRTAP20-2Q3LI61 65 aa0.48□□□□□ -2.33
RNF111-211ENST00000560952 MT1EP04732 61 aa0.47□□□□□ -2.33
RNF111-211ENST00000560952 SPRR2GQ9BYE4 73 aa0.47□□□□□ -2.33
RNF111-211ENST00000560952 MT1LQ93083 61 aa0.46□□□□□ -2.34
RNF111-211ENST00000560952 MT1XP80297 61 aa0.43□□□□□ -2.34
RNF111-211ENST00000560952 MT1BP07438 61 aa0.42□□□□□ -2.34
RNF111-211ENST00000560952 MUC16Q8WXI7 14507 aa0.42□□□□□ -2.34
RNF111-211ENST00000560952 MT1GP13640 62 aa0.4□□□□□ -2.35
RNF111-211ENST00000560952 KRTAP19-8Q3LI54 63 aa0.38□□□□□ -2.35
RNF111-211ENST00000560952 KRTAP19-7Q3SYF9 63 aa0.38□□□□□ -2.35
RNF111-211ENST00000560952 KRTAP6-1Q3LI64 71 aa0.34□□□□□ -2.36
RNF111-211ENST00000560952 MT1MQ8N339 61 aa0.3□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 449.9 ms