RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 H7BZZ5 65 aa4.06□□□□□ -1.76
GABPB1-210ENST00000560825 A0A1B0GU33 70 aa4.04□□□□□ -1.76
GABPB1-210ENST00000560825 COX7CP15954 63 aa4.04□□□□□ -1.76
GABPB1-210ENST00000560825 A8MU10 97 aa4.03□□□□□ -1.76
GABPB1-210ENST00000560825 KRTAP5-1Q6L8H4 278 aa4.03□□□□□ -1.76
GABPB1-210ENST00000560825 SERP1Q9Y6X1 66 aa4.02□□□□□ -1.77
GABPB1-210ENST00000560825 KRTAP4-3Q9BYR4 195 aa4.01□□□□□ -1.77
GABPB1-210ENST00000560825 MT1MQ8N339 61 aa3.99□□□□□ -1.77
GABPB1-210ENST00000560825 MT1LQ93083 61 aa3.99□□□□□ -1.77
GABPB1-210ENST00000560825 MT1GP13640 62 aa3.98□□□□□ -1.77
GABPB1-210ENST00000560825 LCE3AQ5TA76 89 aa3.96□□□□□ -1.77
GABPB1-210ENST00000560825 C10orf95Q9H7T3 257 aa3.96□□□□□ -1.77
GABPB1-210ENST00000560825 KRTAP5-4Q6L8H1 288 aa3.95□□□□□ -1.78
GABPB1-210ENST00000560825 GPR98Q8WXG9 6306 aa3.95□□□□□ -1.78
GABPB1-210ENST00000560825 HMCN1Q96RW7 5635 aa3.94□□□□□ -1.78
GABPB1-210ENST00000560825 PRAC1Q96KF2 57 aa3.94□□□□□ -1.78
GABPB1-210ENST00000560825 MT4P47944 62 aa3.92□□□□□ -1.78
GABPB1-210ENST00000560825 A0A1B0GU69 56 aa3.91□□□□□ -1.78
GABPB1-210ENST00000560825 KRTAP4-4Q9BYR3 166 aa3.9□□□□□ -1.78
GABPB1-210ENST00000560825 PRO0628Q9UI54 55 aa3.88□□□□□ -1.79
GABPB1-210ENST00000560825 CCDC179H3BU77 68 aa3.87□□□□□ -1.79
GABPB1-210ENST00000560825 PP632Q6XCG6 107 aa3.87□□□□□ -1.79
GABPB1-210ENST00000560825 SMIM26A0A096LP01 95 aa3.87□□□□□ -1.79
GABPB1-210ENST00000560825 ANAPC13Q9BS18 74 aa3.84□□□□□ -1.79
GABPB1-210ENST00000560825 TNP1P09430 55 aa3.81□□□□□ -1.8
GABPB1-210ENST00000560825 AHNAK2Q8IVF2 5795 aa3.8□□□□□ -1.8
GABPB1-210ENST00000560825 MT3P25713 68 aa3.77□□□□□ -1.81
GABPB1-210ENST00000560825 PMAIP1Q13794 54 aa3.76□□□□□ -1.81
GABPB1-210ENST00000560825 PSPHP1O15172 72 aa3.75□□□□□ -1.81
GABPB1-210ENST00000560825 KRTAP12-3P60328 96 aa3.75□□□□□ -1.81
GABPB1-210ENST00000560825 LINC01558Q9Y6Z2 57 aa3.74□□□□□ -1.81
GABPB1-210ENST00000560825 KRTAP5-10Q6L8G5 202 aa3.73□□□□□ -1.81
GABPB1-210ENST00000560825 KRTAP5-5Q701N2 237 aaPredicted RBP3.69□□□□□ -1.82
GABPB1-210ENST00000560825 PRR15LQ9BU68 103 aa3.69□□□□□ -1.82
GABPB1-210ENST00000560825 RPS28P62857 69 aaKnown RBP3.66□□□□□ -1.82
GABPB1-210ENST00000560825 ATP5EP56381 51 aaPredicted RBP3.65□□□□□ -1.83
GABPB1-210ENST00000560825 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
GABPB1-210ENST00000560825 SYNE1Q8NF91 8797 aaKnown RBP3.61□□□□□ -1.83
GABPB1-210ENST00000560825 UQCR11O14957 56 aa3.61□□□□□ -1.83
GABPB1-210ENST00000560825 TMEM258P61165 79 aa3.58□□□□□ -1.84
GABPB1-210ENST00000560825 MIR22HGQ0VDD5 57 aa3.55□□□□□ -1.84
GABPB1-210ENST00000560825 KRTAP5-7Q6L8G8 165 aa3.55□□□□□ -1.84
GABPB1-210ENST00000560825 SPRR5A0A1B0GTR4 108 aa3.53□□□□□ -1.84
GABPB1-210ENST00000560825 KRTAP25-1Q3LHN0 102 aa3.53□□□□□ -1.84
GABPB1-210ENST00000560825 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
GABPB1-210ENST00000560825 KRTAP12-4P60329 112 aa3.47□□□□□ -1.85
GABPB1-210ENST00000560825 LCE3CQ5T5A8 94 aa3.45□□□□□ -1.86
GABPB1-210ENST00000560825 LUZP6Q538Z0 58 aa3.44□□□□□ -1.86
GABPB1-210ENST00000560825 KTN1-AS1Q86SY8 53 aa3.43□□□□□ -1.86
GABPB1-210ENST00000560825 Q1T7F1 81 aa3.41□□□□□ -1.86
GABPB1-210ENST00000560825 KRTAP6-1Q3LI64 71 aa3.41□□□□□ -1.86
GABPB1-210ENST00000560825 OBSCNQ5VST9 7968 aa3.4□□□□□ -1.87
GABPB1-210ENST00000560825 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
GABPB1-210ENST00000560825 K7ERS5 55 aa3.36□□□□□ -1.87
GABPB1-210ENST00000560825 KRTAP5-2Q701N4 177 aa3.36□□□□□ -1.87
GABPB1-210ENST00000560825 MT1AP04731 61 aa3.35□□□□□ -1.87
GABPB1-210ENST00000560825 A6NED7 52 aa3.33□□□□□ -1.88
GABPB1-210ENST00000560825 BRK1Q8WUW1 75 aa3.32□□□□□ -1.88
GABPB1-210ENST00000560825 KRTAP6-2Q3LI66 62 aa3.26□□□□□ -1.89
GABPB1-210ENST00000560825 CDC42SE1Q9NRR8 79 aa3.26□□□□□ -1.89
GABPB1-210ENST00000560825 KRTAP5-8O75690 187 aa3.25□□□□□ -1.89
GABPB1-210ENST00000560825 ROMO1P60602 79 aa3.25□□□□□ -1.89
GABPB1-210ENST00000560825 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
GABPB1-210ENST00000560825 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
GABPB1-210ENST00000560825 MUC5BQ9HC84 5762 aaPredicted RBP3.13□□□□□ -1.91
GABPB1-210ENST00000560825 AHNAKQ09666 5890 aaKnown RBP3.09□□□□□ -1.92
GABPB1-210ENST00000560825 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
GABPB1-210ENST00000560825 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
GABPB1-210ENST00000560825 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
GABPB1-210ENST00000560825 INE1O15225 51 aa2.5□□□□□ -2.01
GABPB1-210ENST00000560825 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
GABPB1-210ENST00000560825 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
GABPB1-210ENST00000560825 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
GABPB1-210ENST00000560825 PHGR1C9JFL3 82 aa2.15□□□□□ -2.07
GABPB1-210ENST00000560825 PRM1P04553 51 aa1.71□□□□□ -2.14
GABPB1-210ENST00000560825 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
GABPB1-210ENST00000560825 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 10.9 ms