RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 MMP24-AS1A0A0U1RRL7 71 aa1.17□□□□□ -2.22
LRRC28-218ENST00000560236 V9GYY9 64 aa1.17□□□□□ -2.22
LRRC28-218ENST00000560236 MT4P47944 62 aa1.16□□□□□ -2.22
LRRC28-218ENST00000560236 DEFB105AQ8NG35 78 aa1.16□□□□□ -2.22
LRRC28-218ENST00000560236 BRK1Q8WUW1 75 aa1.16□□□□□ -2.22
LRRC28-218ENST00000560236 A0A087WSZ3 146 aa1.15□□□□□ -2.23
LRRC28-218ENST00000560236 A8MUN3 132 aa1.15□□□□□ -2.23
LRRC28-218ENST00000560236 H0Y9P7 68 aa1.15□□□□□ -2.23
LRRC28-218ENST00000560236 MP68P56378 58 aa1.15□□□□□ -2.23
LRRC28-218ENST00000560236 PMAIP1Q13794 54 aa1.15□□□□□ -2.23
LRRC28-218ENST00000560236 SPINT4Q6UDR6 99 aa1.15□□□□□ -2.23
LRRC28-218ENST00000560236 LCA10Q71F78 164 aa1.15□□□□□ -2.23
LRRC28-218ENST00000560236 LINC00208Q96KT6 92 aa1.15□□□□□ -2.23
LRRC28-218ENST00000560236 LINC01558Q9Y6Z2 57 aa1.15□□□□□ -2.23
LRRC28-218ENST00000560236 CASC2Q6XLA1 102 aa1.14□□□□□ -2.23
LRRC28-218ENST00000560236 ADM2Q7Z4H4 148 aa1.14□□□□□ -2.23
LRRC28-218ENST00000560236 COA5Q86WW8 74 aa1.14□□□□□ -2.23
LRRC28-218ENST00000560236 WFDC13Q8IUB5 93 aa1.14□□□□□ -2.23
LRRC28-218ENST00000560236 TP53AIP1Q9HCN2 124 aa1.14□□□□□ -2.23
LRRC28-218ENST00000560236 CDC42SE1Q9NRR8 79 aa1.14□□□□□ -2.23
LRRC28-218ENST00000560236 PSPHP1O15172 72 aa1.13□□□□□ -2.23
LRRC28-218ENST00000560236 H1FX-AS1Q4G0G2 97 aa1.13□□□□□ -2.23
LRRC28-218ENST00000560236 KTN1-AS1Q86SY8 53 aa1.13□□□□□ -2.23
LRRC28-218ENST00000560236 NDUFS5O43920 106 aa1.12□□□□□ -2.23
LRRC28-218ENST00000560236 SPINK7P58062 85 aa1.12□□□□□ -2.23
LRRC28-218ENST00000560236 LINC00313P59037 77 aa1.12□□□□□ -2.23
LRRC28-218ENST00000560236 MRPL34Q9BQ48 92 aaKnown RBP1.12□□□□□ -2.23
LRRC28-218ENST00000560236 PRR15LQ9BU68 103 aa1.12□□□□□ -2.23
LRRC28-218ENST00000560236 CRIPTQ9P021 101 aa1.12□□□□□ -2.23
LRRC28-218ENST00000560236 CHKB-CPT1BH3BT56 60 aa1.11□□□□□ -2.23
LRRC28-218ENST00000560236 C7orf65Q6ZTY9 151 aa1.11□□□□□ -2.23
LRRC28-218ENST00000560236 DMAC1Q96GE9 116 aa1.11□□□□□ -2.23
LRRC28-218ENST00000560236 AHNAKQ09666 5890 aaKnown RBP1.1□□□□□ -2.23
LRRC28-218ENST00000560236 C8orf87E5RJ46 101 aa1.1□□□□□ -2.23
LRRC28-218ENST00000560236 SPATA8Q6RVD6 105 aa1.1□□□□□ -2.23
LRRC28-218ENST00000560236 IGHV6-1A0A0B4J1U7 121 aa1.09□□□□□ -2.23
LRRC28-218ENST00000560236 A6NED7 52 aa1.09□□□□□ -2.23
LRRC28-218ENST00000560236 LUZP6Q538Z0 58 aa1.09□□□□□ -2.23
LRRC28-218ENST00000560236 ACYP2P14621 99 aa1.08□□□□□ -2.24
LRRC28-218ENST00000560236 MT1XP80297 61 aa1.08□□□□□ -2.24
LRRC28-218ENST00000560236 MUC5ACP98088 5654 aa1.06□□□□□ -2.24
LRRC28-218ENST00000560236 CSAG1Q6PB30 78 aa1.06□□□□□ -2.24
LRRC28-218ENST00000560236 SPTSSBQ8NFR3 76 aa1.06□□□□□ -2.24
LRRC28-218ENST00000560236 PLAC4Q8WY50 150 aa1.06□□□□□ -2.24
LRRC28-218ENST00000560236 R4GN34 69 aa1.06□□□□□ -2.24
LRRC28-218ENST00000560236 KRTAP19-3Q7Z4W3 81 aa1.05□□□□□ -2.24
LRRC28-218ENST00000560236 MUC5BQ9HC84 5762 aaPredicted RBP1.04□□□□□ -2.24
LRRC28-218ENST00000560236 A0A1B0GU69 56 aa1.04□□□□□ -2.24
LRRC28-218ENST00000560236 UQCR11O14957 56 aa1.04□□□□□ -2.24
LRRC28-218ENST00000560236 MIR22HGQ0VDD5 57 aa1.04□□□□□ -2.24
LRRC28-218ENST00000560236 KRTAP20-2Q3LI61 65 aa1.04□□□□□ -2.24
LRRC28-218ENST00000560236 LINC01554Q52M75 96 aa1.04□□□□□ -2.24
LRRC28-218ENST00000560236 H0YAA0 97 aa1.03□□□□□ -2.24
LRRC28-218ENST00000560236 MT1GP13640 62 aa1.03□□□□□ -2.24
LRRC28-218ENST00000560236 KRTAP25-1Q3LHN0 102 aa1.01□□□□□ -2.25
LRRC28-218ENST00000560236 S4R3F8 94 aa1□□□□□ -2.25
LRRC28-218ENST00000560236 A0A1B0GU33 70 aa0.99□□□□□ -2.25
LRRC28-218ENST00000560236 MT1EP04732 61 aa0.99□□□□□ -2.25
LRRC28-218ENST00000560236 KRTAP12-1P59990 96 aa0.98□□□□□ -2.25
LRRC28-218ENST00000560236 ROMO1P60602 79 aa0.98□□□□□ -2.25
LRRC28-218ENST00000560236 KRTAP19-7Q3SYF9 63 aa0.98□□□□□ -2.25
LRRC28-218ENST00000560236 MT1MQ8N339 61 aa0.96□□□□□ -2.26
LRRC28-218ENST00000560236 SYNE1Q8NF91 8797 aaKnown RBP0.95□□□□□ -2.26
LRRC28-218ENST00000560236 K7ERS5 55 aa0.94□□□□□ -2.26
LRRC28-218ENST00000560236 M0QZ58 72 aa0.92□□□□□ -2.26
LRRC28-218ENST00000560236 C10orf95Q9H7T3 257 aa0.91□□□□□ -2.26
LRRC28-218ENST00000560236 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.26
LRRC28-218ENST00000560236 A0A0D9SG42 100 aa0.89□□□□□ -2.27
LRRC28-218ENST00000560236 MT1LQ93083 61 aa0.89□□□□□ -2.27
LRRC28-218ENST00000560236 KRTAP19-5Q3LI72 72 aa0.87□□□□□ -2.27
LRRC28-218ENST00000560236 TNP1P09430 55 aa0.79□□□□□ -2.28
LRRC28-218ENST00000560236 MT1AP04731 61 aa0.78□□□□□ -2.28
LRRC28-218ENST00000560236 KRTAP6-2Q3LI66 62 aa0.78□□□□□ -2.28
LRRC28-218ENST00000560236 PHGR1C9JFL3 82 aa0.77□□□□□ -2.29
LRRC28-218ENST00000560236 KRTAP6-1Q3LI64 71 aa0.76□□□□□ -2.29
LRRC28-218ENST00000560236 INE1O15225 51 aa0.75□□□□□ -2.29
LRRC28-218ENST00000560236 KRTAP21-1Q3LI58 79 aa0.6□□□□□ -2.31
LRRC28-218ENST00000560236 PRM1P04553 51 aa0.51□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 129.5 ms