RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 NEBP20929 6669 aa3.91□□□□□ -1.78
TPM1-221ENST00000559831 KRTAP19-5Q3LI72 72 aa3.91□□□□□ -1.78
TPM1-221ENST00000559831 SPRR2FQ96RM1 72 aa3.91□□□□□ -1.78
TPM1-221ENST00000559831 KRTAP4-7Q9BYR0 210 aa3.91□□□□□ -1.78
TPM1-221ENST00000559831 PP632Q6XCG6 107 aa3.9□□□□□ -1.79
TPM1-221ENST00000559831 PRAC1Q96KF2 57 aa3.9□□□□□ -1.79
TPM1-221ENST00000559831 KRTAP4-9Q9BYQ8 210 aa3.9□□□□□ -1.79
TPM1-221ENST00000559831 MUC12Q9UKN1 5478 aa3.89□□□□□ -1.79
TPM1-221ENST00000559831 KRTAP15-1Q3LI76 137 aa3.89□□□□□ -1.79
TPM1-221ENST00000559831 KRTAP5-9P26371 169 aa3.87□□□□□ -1.79
TPM1-221ENST00000559831 KRTAP19-7Q3SYF9 63 aa3.87□□□□□ -1.79
TPM1-221ENST00000559831 KTN1-AS1Q86SY8 53 aa3.87□□□□□ -1.79
TPM1-221ENST00000559831 KRTAP12-3P60328 96 aa3.85□□□□□ -1.79
TPM1-221ENST00000559831 MT1EP04732 61 aa3.83□□□□□ -1.8
TPM1-221ENST00000559831 KRTAP20-1Q3LI63 56 aa3.81□□□□□ -1.8
TPM1-221ENST00000559831 KRTAP4-11Q9BYQ6 195 aa3.8□□□□□ -1.8
TPM1-221ENST00000559831 SPRR2EP22531 72 aa3.77□□□□□ -1.81
TPM1-221ENST00000559831 SPRR2BP35325 72 aa3.77□□□□□ -1.81
TPM1-221ENST00000559831 SPRR2AP35326 72 aa3.77□□□□□ -1.81
TPM1-221ENST00000559831 KRTAP4-2Q9BYR5 136 aa3.75□□□□□ -1.81
TPM1-221ENST00000559831 MDN1Q9NU22 5596 aa3.73□□□□□ -1.81
TPM1-221ENST00000559831 LCE1AQ5T7P2 110 aa3.73□□□□□ -1.81
TPM1-221ENST00000559831 MT1LQ93083 61 aa3.73□□□□□ -1.81
TPM1-221ENST00000559831 KRTAP19-3Q7Z4W3 81 aa3.72□□□□□ -1.81
TPM1-221ENST00000559831 KRTAP2-3P0C7H8 128 aa3.71□□□□□ -1.82
TPM1-221ENST00000559831 KRTAP2-4Q9BYR9 128 aa3.71□□□□□ -1.82
TPM1-221ENST00000559831 A0A0A0MQY5 61 aa3.68□□□□□ -1.82
TPM1-221ENST00000559831 MT1GP13640 62 aa3.66□□□□□ -1.82
TPM1-221ENST00000559831 SPRR2DP22532 72 aa3.63□□□□□ -1.83
TPM1-221ENST00000559831 MT1MQ8N339 61 aa3.63□□□□□ -1.83
TPM1-221ENST00000559831 KRTAP2-2Q9BYT5 123 aa3.59□□□□□ -1.83
TPM1-221ENST00000559831 KRTAP2-1Q9BYU5 128 aa3.59□□□□□ -1.83
TPM1-221ENST00000559831 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
TPM1-221ENST00000559831 KRTAP4-3Q9BYR4 195 aa3.56□□□□□ -1.84
TPM1-221ENST00000559831 KRTAP9-6A8MVA2 160 aa3.36□□□□□ -1.87
TPM1-221ENST00000559831 SPRR5A0A1B0GTR4 108 aa3.35□□□□□ -1.87
TPM1-221ENST00000559831 DSTQ03001 7570 aaKnown RBP3.32□□□□□ -1.88
TPM1-221ENST00000559831 KRTAP5-5Q701N2 237 aaPredicted RBP3.26□□□□□ -1.89
TPM1-221ENST00000559831 LUZP6Q538Z0 58 aa3.2□□□□□ -1.9
TPM1-221ENST00000559831 KRTAP5-4Q6L8H1 288 aa3.2□□□□□ -1.9
TPM1-221ENST00000559831 GPR98Q8WXG9 6306 aa3.19□□□□□ -1.9
TPM1-221ENST00000559831 MT1AP04731 61 aa3.18□□□□□ -1.9
TPM1-221ENST00000559831 MT4P47944 62 aa3.17□□□□□ -1.9
TPM1-221ENST00000559831 KRTAP5-3Q6L8H2 238 aa3.16□□□□□ -1.9
TPM1-221ENST00000559831 KRTAP6-1Q3LI64 71 aa3.15□□□□□ -1.91
TPM1-221ENST00000559831 KRTAP12-4P60329 112 aa3.1□□□□□ -1.91
TPM1-221ENST00000559831 HMCN1Q96RW7 5635 aa3.07□□□□□ -1.92
TPM1-221ENST00000559831 KRTAP20-2Q3LI61 65 aa3.02□□□□□ -1.93
TPM1-221ENST00000559831 SYNE1Q8NF91 8797 aaKnown RBP3□□□□□ -1.93
TPM1-221ENST00000559831 NDUFAF8A1L188 74 aa2.98□□□□□ -1.93
TPM1-221ENST00000559831 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
TPM1-221ENST00000559831 MT3P25713 68 aa2.96□□□□□ -1.94
TPM1-221ENST00000559831 KRTAP6-2Q3LI66 62 aa2.93□□□□□ -1.94
TPM1-221ENST00000559831 KRTAP5-10Q6L8G5 202 aa2.93□□□□□ -1.94
TPM1-221ENST00000559831 KRTAP5-2Q701N4 177 aa2.87□□□□□ -1.95
TPM1-221ENST00000559831 KRTAP5-7Q6L8G8 165 aa2.84□□□□□ -1.95
TPM1-221ENST00000559831 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
TPM1-221ENST00000559831 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
TPM1-221ENST00000559831 LCE1EQ5T753 118 aa2.61□□□□□ -1.99
TPM1-221ENST00000559831 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
TPM1-221ENST00000559831 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
TPM1-221ENST00000559831 KRTAP5-8O75690 187 aa2.55□□□□□ -2
TPM1-221ENST00000559831 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
TPM1-221ENST00000559831 KRTAP5-1Q6L8H4 278 aa2.5□□□□□ -2.01
TPM1-221ENST00000559831 INE1O15225 51 aa2.44□□□□□ -2.02
TPM1-221ENST00000559831 MUC5BQ9HC84 5762 aaPredicted RBP2.44□□□□□ -2.02
TPM1-221ENST00000559831 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
TPM1-221ENST00000559831 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
TPM1-221ENST00000559831 LCE1BQ5T7P3 118 aa2.42□□□□□ -2.02
TPM1-221ENST00000559831 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.39□□□□□ -2.03
TPM1-221ENST00000559831 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
TPM1-221ENST00000559831 PRM1P04553 51 aa2.17□□□□□ -2.06
TPM1-221ENST00000559831 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
TPM1-221ENST00000559831 KRTAP4-4Q9BYR3 166 aa2.03□□□□□ -2.08
TPM1-221ENST00000559831 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
TPM1-221ENST00000559831 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
TPM1-221ENST00000559831 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
TPM1-221ENST00000559831 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 98.9 ms