RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 A8MU10 97 aa2.62□□□□□ -1.99
USP3-215ENST00000559771 LCE1CQ5T751 118 aa2.62□□□□□ -1.99
USP3-215ENST00000559771 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
USP3-215ENST00000559771 KRTAP19-8Q3LI54 63 aa2.61□□□□□ -1.99
USP3-215ENST00000559771 A0A1B0GU33 70 aa2.6□□□□□ -1.99
USP3-215ENST00000559771 SPRR2GQ9BYE4 73 aa2.6□□□□□ -1.99
USP3-215ENST00000559771 MDN1Q9NU22 5596 aa2.59□□□□□ -1.99
USP3-215ENST00000559771 KMT2DO14686 5537 aa2.59□□□□□ -1.99
USP3-215ENST00000559771 KRTAP20-1Q3LI63 56 aa2.59□□□□□ -1.99
USP3-215ENST00000559771 K7ERS5 55 aa2.56□□□□□ -2
USP3-215ENST00000559771 S4R3F8 94 aa2.56□□□□□ -2
USP3-215ENST00000559771 H0YAA0 97 aa2.55□□□□□ -2
USP3-215ENST00000559771 NDUFAF8A1L188 74 aa2.53□□□□□ -2
USP3-215ENST00000559771 CSAG1Q6PB30 78 aa2.52□□□□□ -2.01
USP3-215ENST00000559771 M0QZ58 72 aa2.5□□□□□ -2.01
USP3-215ENST00000559771 KRTAP2-3P0C7H8 128 aa2.49□□□□□ -2.01
USP3-215ENST00000559771 KRTAP2-4Q9BYR9 128 aa2.49□□□□□ -2.01
USP3-215ENST00000559771 LCE3EQ5T5B0 92 aa2.46□□□□□ -2.02
USP3-215ENST00000559771 ADM2Q7Z4H4 148 aa2.46□□□□□ -2.02
USP3-215ENST00000559771 SPRR2FQ96RM1 72 aa2.46□□□□□ -2.02
USP3-215ENST00000559771 MT1XP80297 61 aa2.45□□□□□ -2.02
USP3-215ENST00000559771 CRIPTQ9P021 101 aa2.45□□□□□ -2.02
USP3-215ENST00000559771 SPRR2EP22531 72 aa2.44□□□□□ -2.02
USP3-215ENST00000559771 SPRR2BP35325 72 aa2.44□□□□□ -2.02
USP3-215ENST00000559771 SPRR2AP35326 72 aa2.44□□□□□ -2.02
USP3-215ENST00000559771 ROMO1P60602 79 aa2.44□□□□□ -2.02
USP3-215ENST00000559771 P0C880 135 aa2.43□□□□□ -2.02
USP3-215ENST00000559771 LINC01554Q52M75 96 aa2.43□□□□□ -2.02
USP3-215ENST00000559771 KRTAP25-1Q3LHN0 102 aa2.42□□□□□ -2.02
USP3-215ENST00000559771 KRTAP13-4Q3LI77 160 aa2.42□□□□□ -2.02
USP3-215ENST00000559771 KRTAP2-1Q9BYU5 128 aa2.41□□□□□ -2.02
USP3-215ENST00000559771 A0A0D9SG42 100 aa2.39□□□□□ -2.03
USP3-215ENST00000559771 KRTAP12-2P59991 146 aa2.39□□□□□ -2.03
USP3-215ENST00000559771 KRTAP8-1Q8IUC2 63 aa2.39□□□□□ -2.03
USP3-215ENST00000559771 KRTAP12-1P59990 96 aa2.38□□□□□ -2.03
USP3-215ENST00000559771 R4GN34 69 aa2.38□□□□□ -2.03
USP3-215ENST00000559771 PRO2289Q9P1D8 64 aa2.37□□□□□ -2.03
USP3-215ENST00000559771 SPRR2DP22532 72 aa2.36□□□□□ -2.03
USP3-215ENST00000559771 SPINT4Q6UDR6 99 aa2.35□□□□□ -2.03
USP3-215ENST00000559771 PLAC4Q8WY50 150 aa2.33□□□□□ -2.04
USP3-215ENST00000559771 GPR98Q8WXG9 6306 aa2.29□□□□□ -2.04
USP3-215ENST00000559771 DSTQ03001 7570 aaKnown RBP2.27□□□□□ -2.05
USP3-215ENST00000559771 PP632Q6XCG6 107 aa2.27□□□□□ -2.05
USP3-215ENST00000559771 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
USP3-215ENST00000559771 CAMK2N1Q7Z7J9 78 aa2.24□□□□□ -2.05
USP3-215ENST00000559771 C10orf95Q9H7T3 257 aa2.23□□□□□ -2.05
USP3-215ENST00000559771 KRTAP19-7Q3SYF9 63 aa2.2□□□□□ -2.06
USP3-215ENST00000559771 TNP1P09430 55 aa2.19□□□□□ -2.06
USP3-215ENST00000559771 MT1EP04732 61 aa2.17□□□□□ -2.06
USP3-215ENST00000559771 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
USP3-215ENST00000559771 KRTAP19-3Q7Z4W3 81 aa2.16□□□□□ -2.06
USP3-215ENST00000559771 HMCN1Q96RW7 5635 aa2.15□□□□□ -2.07
USP3-215ENST00000559771 AHNAK2Q8IVF2 5795 aa2.1□□□□□ -2.07
USP3-215ENST00000559771 MT1GP13640 62 aa2.09□□□□□ -2.07
USP3-215ENST00000559771 KRTAP19-5Q3LI72 72 aa2.09□□□□□ -2.07
USP3-215ENST00000559771 MT4P47944 62 aa2.08□□□□□ -2.08
USP3-215ENST00000559771 KRTAP5-10Q6L8G5 202 aa2.07□□□□□ -2.08
USP3-215ENST00000559771 MT1MQ8N339 61 aa2.07□□□□□ -2.08
USP3-215ENST00000559771 LUZP6Q538Z0 58 aa2.06□□□□□ -2.08
USP3-215ENST00000559771 MT1LQ93083 61 aa2.06□□□□□ -2.08
USP3-215ENST00000559771 SPRR5A0A1B0GTR4 108 aa2.03□□□□□ -2.08
USP3-215ENST00000559771 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
USP3-215ENST00000559771 KRTAP12-3P60328 96 aa1.96□□□□□ -2.1
USP3-215ENST00000559771 KRTAP20-2Q3LI61 65 aa1.95□□□□□ -2.1
USP3-215ENST00000559771 SYNE1Q8NF91 8797 aaKnown RBP1.91□□□□□ -2.1
USP3-215ENST00000559771 KRTAP12-4P60329 112 aa1.84□□□□□ -2.11
USP3-215ENST00000559771 INE1O15225 51 aa1.79□□□□□ -2.12
USP3-215ENST00000559771 AHNAKQ09666 5890 aaKnown RBP1.76□□□□□ -2.13
USP3-215ENST00000559771 MUC5ACP98088 5654 aa1.75□□□□□ -2.13
USP3-215ENST00000559771 KRTAP6-1Q3LI64 71 aa1.75□□□□□ -2.13
USP3-215ENST00000559771 MT1AP04731 61 aa1.74□□□□□ -2.13
USP3-215ENST00000559771 MUC5BQ9HC84 5762 aaPredicted RBP1.73□□□□□ -2.13
USP3-215ENST00000559771 LCE3DQ9BYE3 92 aa1.72□□□□□ -2.13
USP3-215ENST00000559771 KRTAP6-2Q3LI66 62 aa1.69□□□□□ -2.14
USP3-215ENST00000559771 PRM1P04553 51 aa1.24□□□□□ -2.21
USP3-215ENST00000559771 PHGR1C9JFL3 82 aa1.18□□□□□ -2.22
USP3-215ENST00000559771 KRTAP21-1Q3LI58 79 aa0.88□□□□□ -2.27
USP3-215ENST00000559771 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms