RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 LOC100996750A0A140TA64 210 aa5.56□□□□□ -1.52
USP8-208ENST00000559329 KRTAP4-6Q9BYQ5 205 aa5.56□□□□□ -1.52
USP8-208ENST00000559329 KRTAP9-7A8MTY7 169 aa5.53□□□□□ -1.52
USP8-208ENST00000559329 KRTAP4-7Q9BYR0 210 aa5.53□□□□□ -1.52
USP8-208ENST00000559329 A0A0A0MQY5 61 aa5.52□□□□□ -1.53
USP8-208ENST00000559329 KRTAP9-6A8MVA2 160 aa5.52□□□□□ -1.53
USP8-208ENST00000559329 MACF1Q9UPN3 7388 aaKnown RBP5.44□□□□□ -1.54
USP8-208ENST00000559329 SYNE2Q8WXH0 6885 aaKnown RBP5.41□□□□□ -1.54
USP8-208ENST00000559329 KRTAP19-3Q7Z4W3 81 aa5.37□□□□□ -1.55
USP8-208ENST00000559329 MUC12Q9UKN1 5478 aa5.37□□□□□ -1.55
USP8-208ENST00000559329 MT1GP13640 62 aa5.33□□□□□ -1.56
USP8-208ENST00000559329 MT1MQ8N339 61 aa5.33□□□□□ -1.56
USP8-208ENST00000559329 KRTAP4-3Q9BYR4 195 aa5.27□□□□□ -1.57
USP8-208ENST00000559329 SPRR2FQ96RM1 72 aa5.27□□□□□ -1.57
USP8-208ENST00000559329 KRTAP2-3P0C7H8 128 aa5.25□□□□□ -1.57
USP8-208ENST00000559329 LCE5AQ5TCM9 118 aa5.25□□□□□ -1.57
USP8-208ENST00000559329 KRTAP2-4Q9BYR9 128 aa5.25□□□□□ -1.57
USP8-208ENST00000559329 KRTAP2-1Q9BYU5 128 aa5.25□□□□□ -1.57
USP8-208ENST00000559329 KRTAP6-3Q3LI67 103 aa5.23□□□□□ -1.57
USP8-208ENST00000559329 INE1O15225 51 aa5.12□□□□□ -1.59
USP8-208ENST00000559329 KRTAP5-9P26371 169 aa5.12□□□□□ -1.59
USP8-208ENST00000559329 MDN1Q9NU22 5596 aa5.04□□□□□ -1.6
USP8-208ENST00000559329 NEBP20929 6669 aa5.04□□□□□ -1.6
USP8-208ENST00000559329 LCE1AQ5T7P2 110 aa5.02□□□□□ -1.61
USP8-208ENST00000559329 DSTQ03001 7570 aaKnown RBP4.95□□□□□ -1.62
USP8-208ENST00000559329 SPRR2EP22531 72 aa4.89□□□□□ -1.63
USP8-208ENST00000559329 SPRR2BP35325 72 aa4.89□□□□□ -1.63
USP8-208ENST00000559329 SPRR2AP35326 72 aa4.89□□□□□ -1.63
USP8-208ENST00000559329 KRTAP20-1Q3LI63 56 aa4.83□□□□□ -1.64
USP8-208ENST00000559329 KRTAP5-5Q701N2 237 aaPredicted RBP4.79□□□□□ -1.64
USP8-208ENST00000559329 MT1AP04731 61 aa4.76□□□□□ -1.65
USP8-208ENST00000559329 KRTAP6-1Q3LI64 71 aa4.74□□□□□ -1.65
USP8-208ENST00000559329 SPRR2DP22532 72 aa4.69□□□□□ -1.66
USP8-208ENST00000559329 LCE3BQ5TA77 95 aa4.68□□□□□ -1.66
USP8-208ENST00000559329 KRTAP2-2Q9BYT5 123 aa4.56□□□□□ -1.68
USP8-208ENST00000559329 SYNE1Q8NF91 8797 aaKnown RBP4.53□□□□□ -1.68
USP8-208ENST00000559329 KRTAP4-9Q9BYQ8 210 aa4.52□□□□□ -1.69
USP8-208ENST00000559329 KRTAP12-4P60329 112 aa4.48□□□□□ -1.69
USP8-208ENST00000559329 KRTAP9-4Q9BYQ2 154 aa4.48□□□□□ -1.69
USP8-208ENST00000559329 KRTAP4-12Q9BQ66 201 aa4.47□□□□□ -1.69
USP8-208ENST00000559329 KRTAP5-3Q6L8H2 238 aa4.44□□□□□ -1.7
USP8-208ENST00000559329 KRTAP9-9Q9BYP9 154 aa4.43□□□□□ -1.7
USP8-208ENST00000559329 KRTAP5-4Q6L8H1 288 aa4.38□□□□□ -1.71
USP8-208ENST00000559329 LCE3DQ9BYE3 92 aa4.36□□□□□ -1.71
USP8-208ENST00000559329 KRTAP6-2Q3LI66 62 aa4.29□□□□□ -1.72
USP8-208ENST00000559329 LCE3EQ5T5B0 92 aa4.28□□□□□ -1.72
USP8-208ENST00000559329 MT3P25713 68 aa4.27□□□□□ -1.73
USP8-208ENST00000559329 KRTAP4-2Q9BYR5 136 aa4.27□□□□□ -1.73
USP8-208ENST00000559329 LCE1DQ5T752 114 aa4.21□□□□□ -1.74
USP8-208ENST00000559329 LCE4AQ5TA78 99 aa4.16□□□□□ -1.74
USP8-208ENST00000559329 MT4P47944 62 aa4.11□□□□□ -1.75
USP8-208ENST00000559329 KRTAP20-2Q3LI61 65 aa4.07□□□□□ -1.76
USP8-208ENST00000559329 KRTAP5-2Q701N4 177 aa4.05□□□□□ -1.76
USP8-208ENST00000559329 HMCN1Q96RW7 5635 aa4.02□□□□□ -1.77
USP8-208ENST00000559329 GPR98Q8WXG9 6306 aa4.02□□□□□ -1.77
USP8-208ENST00000559329 PRM1P04553 51 aa3.93□□□□□ -1.78
USP8-208ENST00000559329 KRTAP4-11Q9BYQ6 195 aa3.91□□□□□ -1.78
USP8-208ENST00000559329 OBSCNQ5VST9 7968 aa3.91□□□□□ -1.78
USP8-208ENST00000559329 AHNAK2Q8IVF2 5795 aa3.88□□□□□ -1.79
USP8-208ENST00000559329 KRTAP5-10Q6L8G5 202 aa3.8□□□□□ -1.8
USP8-208ENST00000559329 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
USP8-208ENST00000559329 KRTAP5-7Q6L8G8 165 aa3.61□□□□□ -1.83
USP8-208ENST00000559329 MUC5ACP98088 5654 aa3.56□□□□□ -1.84
USP8-208ENST00000559329 KRTAP5-1Q6L8H4 278 aa3.45□□□□□ -1.86
USP8-208ENST00000559329 LCE1BQ5T7P3 118 aa3.4□□□□□ -1.86
USP8-208ENST00000559329 LCE1CQ5T751 118 aa3.4□□□□□ -1.87
USP8-208ENST00000559329 KRTAP5-8O75690 187 aa3.37□□□□□ -1.87
USP8-208ENST00000559329 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.23□□□□□ -1.89
USP8-208ENST00000559329 MUC5BQ9HC84 5762 aaPredicted RBP3.16□□□□□ -1.9
USP8-208ENST00000559329 AHNAKQ09666 5890 aaKnown RBP3.14□□□□□ -1.91
USP8-208ENST00000559329 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
USP8-208ENST00000559329 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
USP8-208ENST00000559329 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
USP8-208ENST00000559329 PHGR1C9JFL3 82 aa2.54□□□□□ -2
USP8-208ENST00000559329 LCE1FQ5T754 118 aa2.54□□□□□ -2
USP8-208ENST00000559329 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
USP8-208ENST00000559329 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
USP8-208ENST00000559329 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 74.6 ms