RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 KRTAP19-7Q3SYF9 63 aa5.89□□□□□ -1.47
CDC42BPB-204ENST00000559043 MUC12Q9UKN1 5478 aa5.88□□□□□ -1.47
CDC42BPB-204ENST00000559043 KRTAP19-5Q3LI72 72 aa5.86□□□□□ -1.47
CDC42BPB-204ENST00000559043 MDN1Q9NU22 5596 aa5.81□□□□□ -1.48
CDC42BPB-204ENST00000559043 MT1EP04732 61 aa5.78□□□□□ -1.48
CDC42BPB-204ENST00000559043 A0A0A0MQY5 61 aa5.77□□□□□ -1.49
CDC42BPB-204ENST00000559043 LCE1AQ5T7P2 110 aa5.74□□□□□ -1.49
CDC42BPB-204ENST00000559043 NEBP20929 6669 aa5.71□□□□□ -1.5
CDC42BPB-204ENST00000559043 SPRR2EP22531 72 aa5.7□□□□□ -1.5
CDC42BPB-204ENST00000559043 SPRR2BP35325 72 aa5.7□□□□□ -1.5
CDC42BPB-204ENST00000559043 SPRR2AP35326 72 aa5.7□□□□□ -1.5
CDC42BPB-204ENST00000559043 LCE3CQ5T5A8 94 aa5.63□□□□□ -1.51
CDC42BPB-204ENST00000559043 KRTAP19-3Q7Z4W3 81 aa5.61□□□□□ -1.51
CDC42BPB-204ENST00000559043 MT1LQ93083 61 aa5.6□□□□□ -1.51
CDC42BPB-204ENST00000559043 LCE5AQ5TCM9 118 aa5.58□□□□□ -1.52
CDC42BPB-204ENST00000559043 MT1GP13640 62 aa5.52□□□□□ -1.53
CDC42BPB-204ENST00000559043 KRTAP19-4Q3LI73 84 aa5.51□□□□□ -1.53
CDC42BPB-204ENST00000559043 SPRR2DP22532 72 aa5.49□□□□□ -1.53
CDC42BPB-204ENST00000559043 LOC100996750A0A140TA64 210 aa5.48□□□□□ -1.53
CDC42BPB-204ENST00000559043 KRTAP4-6Q9BYQ5 205 aa5.48□□□□□ -1.53
CDC42BPB-204ENST00000559043 MT1MQ8N339 61 aa5.46□□□□□ -1.54
CDC42BPB-204ENST00000559043 KRTAP4-7Q9BYR0 210 aa5.46□□□□□ -1.54
CDC42BPB-204ENST00000559043 KRTAP4-3Q9BYR4 195 aa5.41□□□□□ -1.54
CDC42BPB-204ENST00000559043 KRTAP9-6A8MVA2 160 aa5.38□□□□□ -1.55
CDC42BPB-204ENST00000559043 DSTQ03001 7570 aaKnown RBP5.38□□□□□ -1.55
CDC42BPB-204ENST00000559043 KRTAP2-3P0C7H8 128 aa5.33□□□□□ -1.56
CDC42BPB-204ENST00000559043 KRTAP20-1Q3LI63 56 aa5.33□□□□□ -1.56
CDC42BPB-204ENST00000559043 KRTAP2-4Q9BYR9 128 aa5.33□□□□□ -1.56
CDC42BPB-204ENST00000559043 LCE3BQ5TA77 95 aa5.31□□□□□ -1.56
CDC42BPB-204ENST00000559043 KRTAP2-2Q9BYT5 123 aa5.2□□□□□ -1.58
CDC42BPB-204ENST00000559043 KRTAP2-1Q9BYU5 128 aa5.2□□□□□ -1.58
CDC42BPB-204ENST00000559043 INE1O15225 51 aa5.17□□□□□ -1.58
CDC42BPB-204ENST00000559043 KRTAP5-5Q701N2 237 aaPredicted RBP4.98□□□□□ -1.61
CDC42BPB-204ENST00000559043 KRTAP5-4Q6L8H1 288 aa4.92□□□□□ -1.62
CDC42BPB-204ENST00000559043 KRTAP4-9Q9BYQ8 210 aa4.89□□□□□ -1.63
CDC42BPB-204ENST00000559043 LCE4AQ5TA78 99 aa4.85□□□□□ -1.63
CDC42BPB-204ENST00000559043 MT4P47944 62 aa4.8□□□□□ -1.64
CDC42BPB-204ENST00000559043 LCE1DQ5T752 114 aa4.8□□□□□ -1.64
CDC42BPB-204ENST00000559043 KRTAP6-1Q3LI64 71 aa4.75□□□□□ -1.65
CDC42BPB-204ENST00000559043 MT1AP04731 61 aa4.74□□□□□ -1.65
CDC42BPB-204ENST00000559043 SYNE1Q8NF91 8797 aaKnown RBP4.72□□□□□ -1.65
CDC42BPB-204ENST00000559043 HMCN1Q96RW7 5635 aa4.71□□□□□ -1.66
CDC42BPB-204ENST00000559043 KRTAP12-4P60329 112 aa4.65□□□□□ -1.67
CDC42BPB-204ENST00000559043 KRTAP20-2Q3LI61 65 aa4.61□□□□□ -1.67
CDC42BPB-204ENST00000559043 KRTAP9-4Q9BYQ2 154 aa4.56□□□□□ -1.68
CDC42BPB-204ENST00000559043 KRTAP5-3Q6L8H2 238 aa4.48□□□□□ -1.69
CDC42BPB-204ENST00000559043 KRTAP6-2Q3LI66 62 aa4.43□□□□□ -1.7
CDC42BPB-204ENST00000559043 KRTAP4-12Q9BQ66 201 aa4.43□□□□□ -1.7
CDC42BPB-204ENST00000559043 KRTAP9-9Q9BYP9 154 aa4.43□□□□□ -1.7
CDC42BPB-204ENST00000559043 KRTAP5-2Q701N4 177 aa4.4□□□□□ -1.7
CDC42BPB-204ENST00000559043 AHNAK2Q8IVF2 5795 aa4.33□□□□□ -1.72
CDC42BPB-204ENST00000559043 MT3P25713 68 aa4.3□□□□□ -1.72
CDC42BPB-204ENST00000559043 LCE3DQ9BYE3 92 aa4.29□□□□□ -1.72
CDC42BPB-204ENST00000559043 LCE3EQ5T5B0 92 aa4.22□□□□□ -1.73
CDC42BPB-204ENST00000559043 KRTAP5-10Q6L8G5 202 aa4.2□□□□□ -1.74
CDC42BPB-204ENST00000559043 KRTAP4-2Q9BYR5 136 aa4.18□□□□□ -1.74
CDC42BPB-204ENST00000559043 GPR98Q8WXG9 6306 aa4.18□□□□□ -1.74
CDC42BPB-204ENST00000559043 OBSCNQ5VST9 7968 aa4.18□□□□□ -1.74
CDC42BPB-204ENST00000559043 KRTAP4-11Q9BYQ6 195 aa4.09□□□□□ -1.76
CDC42BPB-204ENST00000559043 KRTAP5-8O75690 187 aa3.96□□□□□ -1.78
CDC42BPB-204ENST00000559043 KRTAP5-7Q6L8G8 165 aa3.93□□□□□ -1.78
CDC42BPB-204ENST00000559043 PRM1P04553 51 aa3.89□□□□□ -1.79
CDC42BPB-204ENST00000559043 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
CDC42BPB-204ENST00000559043 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
CDC42BPB-204ENST00000559043 MUC5ACP98088 5654 aa3.7□□□□□ -1.82
CDC42BPB-204ENST00000559043 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
CDC42BPB-204ENST00000559043 LCE1CQ5T751 118 aa3.57□□□□□ -1.84
CDC42BPB-204ENST00000559043 MUC5BQ9HC84 5762 aaPredicted RBP3.5□□□□□ -1.85
CDC42BPB-204ENST00000559043 AHNAKQ09666 5890 aaKnown RBP3.37□□□□□ -1.87
CDC42BPB-204ENST00000559043 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
CDC42BPB-204ENST00000559043 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
CDC42BPB-204ENST00000559043 KRTAP21-2Q3LI59 83 aa3.13□□□□□ -1.91
CDC42BPB-204ENST00000559043 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
CDC42BPB-204ENST00000559043 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
CDC42BPB-204ENST00000559043 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
CDC42BPB-204ENST00000559043 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
CDC42BPB-204ENST00000559043 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
CDC42BPB-204ENST00000559043 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 123.7 ms