RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 LOC100996750A0A140TA64 210 aa6.61□□□□□ -1.35
CLPX-203ENST00000558958 KRTAP4-6Q9BYQ5 205 aa6.61□□□□□ -1.35
CLPX-203ENST00000558958 LCE1AQ5T7P2 110 aa6.48□□□□□ -1.37
CLPX-203ENST00000558958 SPRR2EP22531 72 aa6.47□□□□□ -1.37
CLPX-203ENST00000558958 SPRR2BP35325 72 aa6.47□□□□□ -1.37
CLPX-203ENST00000558958 SPRR2AP35326 72 aa6.47□□□□□ -1.37
CLPX-203ENST00000558958 MT1LQ93083 61 aa6.46□□□□□ -1.38
CLPX-203ENST00000558958 KRTAP15-1Q3LI76 137 aa6.45□□□□□ -1.38
CLPX-203ENST00000558958 NEBP20929 6669 aa6.45□□□□□ -1.38
CLPX-203ENST00000558958 KRTAP19-3Q7Z4W3 81 aa6.44□□□□□ -1.38
CLPX-203ENST00000558958 LCE5AQ5TCM9 118 aa6.38□□□□□ -1.39
CLPX-203ENST00000558958 MT1GP13640 62 aa6.37□□□□□ -1.39
CLPX-203ENST00000558958 KRTAP19-4Q3LI73 84 aa6.29□□□□□ -1.4
CLPX-203ENST00000558958 SVIPQ8NHG7 77 aa6.29□□□□□ -1.4
CLPX-203ENST00000558958 MT1MQ8N339 61 aa6.28□□□□□ -1.4
CLPX-203ENST00000558958 SPRR2DP22532 72 aa6.23□□□□□ -1.41
CLPX-203ENST00000558958 LCE3CQ5T5A8 94 aa6.2□□□□□ -1.42
CLPX-203ENST00000558958 KRTAP4-7Q9BYR0 210 aa6.2□□□□□ -1.42
CLPX-203ENST00000558958 KRTAP4-3Q9BYR4 195 aa6.12□□□□□ -1.43
CLPX-203ENST00000558958 DSTQ03001 7570 aaKnown RBP6.07□□□□□ -1.44
CLPX-203ENST00000558958 LCE3BQ5TA77 95 aa6.02□□□□□ -1.45
CLPX-203ENST00000558958 KRTAP2-3P0C7H8 128 aa6□□□□□ -1.45
CLPX-203ENST00000558958 KRTAP2-4Q9BYR9 128 aa6□□□□□ -1.45
CLPX-203ENST00000558958 KRTAP20-1Q3LI63 56 aa5.97□□□□□ -1.45
CLPX-203ENST00000558958 SPRR5A0A1B0GTR4 108 aa5.88□□□□□ -1.47
CLPX-203ENST00000558958 KRTAP4-12Q9BQ66 201 aa5.87□□□□□ -1.47
CLPX-203ENST00000558958 KRTAP9-6A8MVA2 160 aa5.85□□□□□ -1.47
CLPX-203ENST00000558958 KRTAP2-2Q9BYT5 123 aa5.85□□□□□ -1.47
CLPX-203ENST00000558958 KRTAP2-1Q9BYU5 128 aa5.85□□□□□ -1.47
CLPX-203ENST00000558958 KRTAP5-5Q701N2 237 aaPredicted RBP5.7□□□□□ -1.5
CLPX-203ENST00000558958 LCE4AQ5TA78 99 aa5.62□□□□□ -1.51
CLPX-203ENST00000558958 KRTAP5-4Q6L8H1 288 aa5.59□□□□□ -1.51
CLPX-203ENST00000558958 KRTAP9-9Q9BYP9 154 aa5.56□□□□□ -1.52
CLPX-203ENST00000558958 KRTAP9-4Q9BYQ2 154 aa5.56□□□□□ -1.52
CLPX-203ENST00000558958 MT1AP04731 61 aa5.5□□□□□ -1.53
CLPX-203ENST00000558958 LUZP6Q538Z0 58 aa5.48□□□□□ -1.53
CLPX-203ENST00000558958 KRTAP6-1Q3LI64 71 aa5.45□□□□□ -1.54
CLPX-203ENST00000558958 KRTAP4-9Q9BYQ8 210 aa5.44□□□□□ -1.54
CLPX-203ENST00000558958 MT4P47944 62 aa5.41□□□□□ -1.54
CLPX-203ENST00000558958 SYNE1Q8NF91 8797 aaKnown RBP5.4□□□□□ -1.55
CLPX-203ENST00000558958 LCE1DQ5T752 114 aa5.39□□□□□ -1.55
CLPX-203ENST00000558958 HMCN1Q96RW7 5635 aa5.38□□□□□ -1.55
CLPX-203ENST00000558958 KRTAP12-4P60329 112 aa5.36□□□□□ -1.55
CLPX-203ENST00000558958 KRTAP20-2Q3LI61 65 aa5.23□□□□□ -1.57
CLPX-203ENST00000558958 NDUFAF8A1L188 74 aa5.13□□□□□ -1.59
CLPX-203ENST00000558958 KRTAP4-2Q9BYR5 136 aa5.13□□□□□ -1.59
CLPX-203ENST00000558958 KRTAP6-2Q3LI66 62 aa5.07□□□□□ -1.6
CLPX-203ENST00000558958 KRTAP5-3Q6L8H2 238 aa5.06□□□□□ -1.6
CLPX-203ENST00000558958 KRTAP5-2Q701N4 177 aa5.02□□□□□ -1.61
CLPX-203ENST00000558958 KRTAP4-11Q9BYQ6 195 aa5□□□□□ -1.61
CLPX-203ENST00000558958 A0A0A0MQY5 61 aa5□□□□□ -1.61
CLPX-203ENST00000558958 MT3P25713 68 aa5□□□□□ -1.61
CLPX-203ENST00000558958 AHNAK2Q8IVF2 5795 aa4.94□□□□□ -1.62
CLPX-203ENST00000558958 GPR98Q8WXG9 6306 aa4.7□□□□□ -1.66
CLPX-203ENST00000558958 KRTAP5-10Q6L8G5 202 aa4.66□□□□□ -1.66
CLPX-203ENST00000558958 OBSCNQ5VST9 7968 aa4.64□□□□□ -1.67
CLPX-203ENST00000558958 LCE3DQ9BYE3 92 aa4.6□□□□□ -1.67
CLPX-203ENST00000558958 KRTAP5-8O75690 187 aa4.44□□□□□ -1.7
CLPX-203ENST00000558958 LCE3EQ5T5B0 92 aa4.43□□□□□ -1.7
CLPX-203ENST00000558958 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
CLPX-203ENST00000558958 KRTAP5-1Q6L8H4 278 aa4.38□□□□□ -1.71
CLPX-203ENST00000558958 KRTAP5-7Q6L8G8 165 aa4.37□□□□□ -1.71
CLPX-203ENST00000558958 MUC5ACP98088 5654 aa4.31□□□□□ -1.72
CLPX-203ENST00000558958 INE1O15225 51 aa4.22□□□□□ -1.73
CLPX-203ENST00000558958 LCE1CQ5T751 118 aa4.11□□□□□ -1.75
CLPX-203ENST00000558958 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
CLPX-203ENST00000558958 MUC5BQ9HC84 5762 aaPredicted RBP4.01□□□□□ -1.77
CLPX-203ENST00000558958 AHNAKQ09666 5890 aaKnown RBP3.89□□□□□ -1.79
CLPX-203ENST00000558958 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
CLPX-203ENST00000558958 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
CLPX-203ENST00000558958 PRM1P04553 51 aa3.71□□□□□ -1.82
CLPX-203ENST00000558958 KRTAP5-11Q6L8G4 156 aa3.66□□□□□ -1.82
CLPX-203ENST00000558958 KRTAP21-2Q3LI59 83 aa3.58□□□□□ -1.84
CLPX-203ENST00000558958 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
CLPX-203ENST00000558958 PHGR1C9JFL3 82 aa3.15□□□□□ -1.91
CLPX-203ENST00000558958 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
CLPX-203ENST00000558958 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
CLPX-203ENST00000558958 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 260.4 ms