RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 KRTAP19-3Q7Z4W3 81 aa4.51□□□□□ -1.69
SMAD3-205ENST00000558428 LCE5AQ5TCM9 118 aa4.49□□□□□ -1.69
SMAD3-205ENST00000558428 KRTAP25-1Q3LHN0 102 aa4.47□□□□□ -1.69
SMAD3-205ENST00000558428 LCE3BQ5TA77 95 aa4.47□□□□□ -1.69
SMAD3-205ENST00000558428 KRTAP2-2Q9BYT5 123 aa4.47□□□□□ -1.69
SMAD3-205ENST00000558428 KRTAP2-1Q9BYU5 128 aa4.47□□□□□ -1.69
SMAD3-205ENST00000558428 MT1GP13640 62 aa4.42□□□□□ -1.7
SMAD3-205ENST00000558428 MT1LQ93083 61 aa4.41□□□□□ -1.7
SMAD3-205ENST00000558428 CDC42SE1Q9NRR8 79 aa4.4□□□□□ -1.71
SMAD3-205ENST00000558428 PP632Q6XCG6 107 aa4.39□□□□□ -1.71
SMAD3-205ENST00000558428 DSTQ03001 7570 aaKnown RBP4.39□□□□□ -1.71
SMAD3-205ENST00000558428 KRTAP12-3P60328 96 aa4.38□□□□□ -1.71
SMAD3-205ENST00000558428 MT1MQ8N339 61 aa4.35□□□□□ -1.71
SMAD3-205ENST00000558428 H3BS24 57 aa4.33□□□□□ -1.72
SMAD3-205ENST00000558428 KRTAP4-12Q9BQ66 201 aa4.33□□□□□ -1.72
SMAD3-205ENST00000558428 ROMO1P60602 79 aa4.31□□□□□ -1.72
SMAD3-205ENST00000558428 KRTAP23-1A1A580 65 aa4.3□□□□□ -1.72
SMAD3-205ENST00000558428 KRTAP4-3Q9BYR4 195 aa4.25□□□□□ -1.73
SMAD3-205ENST00000558428 KRTAP4-7Q9BYR0 210 aa4.21□□□□□ -1.74
SMAD3-205ENST00000558428 KRTAP9-9Q9BYP9 154 aa4.19□□□□□ -1.74
SMAD3-205ENST00000558428 KRTAP9-4Q9BYQ2 154 aa4.19□□□□□ -1.74
SMAD3-205ENST00000558428 KRTAP15-1Q3LI76 137 aa4.16□□□□□ -1.74
SMAD3-205ENST00000558428 BRK1Q8WUW1 75 aa4.14□□□□□ -1.75
SMAD3-205ENST00000558428 KRTAP19-4Q3LI73 84 aa4.12□□□□□ -1.75
SMAD3-205ENST00000558428 KRTAP4-9Q9BYQ8 210 aa4.11□□□□□ -1.75
SMAD3-205ENST00000558428 A0A0A0MQY5 61 aa4.09□□□□□ -1.75
SMAD3-205ENST00000558428 LCE4AQ5TA78 99 aa4.08□□□□□ -1.76
SMAD3-205ENST00000558428 LCE3CQ5T5A8 94 aa4.05□□□□□ -1.76
SMAD3-205ENST00000558428 LCE1DQ5T752 114 aa4.04□□□□□ -1.76
SMAD3-205ENST00000558428 KRTAP5-4Q6L8H1 288 aa4.03□□□□□ -1.76
SMAD3-205ENST00000558428 HMCN1Q96RW7 5635 aa4.03□□□□□ -1.76
SMAD3-205ENST00000558428 MT4P47944 62 aa4.02□□□□□ -1.77
SMAD3-205ENST00000558428 KRTAP5-5Q701N2 237 aaPredicted RBP3.96□□□□□ -1.78
SMAD3-205ENST00000558428 PMAIP1Q13794 54 aa3.88□□□□□ -1.79
SMAD3-205ENST00000558428 AHNAK2Q8IVF2 5795 aa3.84□□□□□ -1.79
SMAD3-205ENST00000558428 GPR98Q8WXG9 6306 aa3.84□□□□□ -1.8
SMAD3-205ENST00000558428 KRTAP12-4P60329 112 aa3.83□□□□□ -1.8
SMAD3-205ENST00000558428 SYNE1Q8NF91 8797 aaKnown RBP3.81□□□□□ -1.8
SMAD3-205ENST00000558428 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
SMAD3-205ENST00000558428 SPRR5A0A1B0GTR4 108 aa3.8□□□□□ -1.8
SMAD3-205ENST00000558428 KRTAP20-2Q3LI61 65 aa3.8□□□□□ -1.8
SMAD3-205ENST00000558428 KRTAP4-2Q9BYR5 136 aa3.79□□□□□ -1.8
SMAD3-205ENST00000558428 MT1AP04731 61 aa3.76□□□□□ -1.81
SMAD3-205ENST00000558428 KRTAP4-11Q9BYQ6 195 aa3.75□□□□□ -1.81
SMAD3-205ENST00000558428 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
SMAD3-205ENST00000558428 PRO0628Q9UI54 55 aa3.73□□□□□ -1.81
SMAD3-205ENST00000558428 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
SMAD3-205ENST00000558428 KRTAP5-3Q6L8H2 238 aa3.67□□□□□ -1.82
SMAD3-205ENST00000558428 KRTAP5-10Q6L8G5 202 aa3.65□□□□□ -1.83
SMAD3-205ENST00000558428 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
SMAD3-205ENST00000558428 KTN1-AS1Q86SY8 53 aa3.54□□□□□ -1.84
SMAD3-205ENST00000558428 KRTAP6-2Q3LI66 62 aa3.52□□□□□ -1.85
SMAD3-205ENST00000558428 KRTAP5-7Q6L8G8 165 aa3.48□□□□□ -1.85
SMAD3-205ENST00000558428 MT3P25713 68 aa3.43□□□□□ -1.86
SMAD3-205ENST00000558428 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.87
SMAD3-205ENST00000558428 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
SMAD3-205ENST00000558428 MUC5ACP98088 5654 aa3.16□□□□□ -1.9
SMAD3-205ENST00000558428 KRTAP5-1Q6L8H4 278 aa3.16□□□□□ -1.9
SMAD3-205ENST00000558428 MUC5BQ9HC84 5762 aaPredicted RBP3.15□□□□□ -1.91
SMAD3-205ENST00000558428 LUZP6Q538Z0 58 aa3.12□□□□□ -1.91
SMAD3-205ENST00000558428 AHNAKQ09666 5890 aaKnown RBP3.09□□□□□ -1.91
SMAD3-205ENST00000558428 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
SMAD3-205ENST00000558428 NDUFAF8A1L188 74 aa3□□□□□ -1.93
SMAD3-205ENST00000558428 LCE3DQ9BYE3 92 aa2.96□□□□□ -1.94
SMAD3-205ENST00000558428 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
SMAD3-205ENST00000558428 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
SMAD3-205ENST00000558428 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
SMAD3-205ENST00000558428 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.63□□□□□ -1.99
SMAD3-205ENST00000558428 KRTAP5-11Q6L8G4 156 aa2.59□□□□□ -1.99
SMAD3-205ENST00000558428 LCE1FQ5T754 118 aa2.47□□□□□ -2.01
SMAD3-205ENST00000558428 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
SMAD3-205ENST00000558428 INE1O15225 51 aa2.35□□□□□ -2.03
SMAD3-205ENST00000558428 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
SMAD3-205ENST00000558428 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
SMAD3-205ENST00000558428 PRM1P04553 51 aa2.22□□□□□ -2.05
SMAD3-205ENST00000558428 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
SMAD3-205ENST00000558428 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
SMAD3-205ENST00000558428 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 63.2 ms