RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 TNP1P09430 55 aa3.09□□□□□ -1.91
MARK3-212ENST00000558223 MT1HP80294 61 aa3.09□□□□□ -1.91
MARK3-212ENST00000558223 FLGP20930 4061 aaPredicted RBP3.07□□□□□ -1.92
MARK3-212ENST00000558223 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
MARK3-212ENST00000558223 KRTAP4-3Q9BYR4 195 aa3.07□□□□□ -1.92
MARK3-212ENST00000558223 HERC1Q15751 4861 aa3.06□□□□□ -1.92
MARK3-212ENST00000558223 HMCN2Q8NDA2 5059 aa3.04□□□□□ -1.92
MARK3-212ENST00000558223 OBSCNQ5VST9 7968 aa3.04□□□□□ -1.92
MARK3-212ENST00000558223 KRTAP10-10P60014 251 aa3.04□□□□□ -1.92
MARK3-212ENST00000558223 MT2AP02795 61 aa3.01□□□□□ -1.93
MARK3-212ENST00000558223 KRTAP19-8Q3LI54 63 aa3.01□□□□□ -1.93
MARK3-212ENST00000558223 MT1FP04733 61 aa2.98□□□□□ -1.93
MARK3-212ENST00000558223 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
MARK3-212ENST00000558223 MUC2Q02817 5179 aa2.89□□□□□ -1.95
MARK3-212ENST00000558223 MT1BP07438 61 aa2.88□□□□□ -1.95
MARK3-212ENST00000558223 RNF213Q63HN8 5207 aa2.87□□□□□ -1.95
MARK3-212ENST00000558223 LCE3AQ5TA76 89 aa2.84□□□□□ -1.95
MARK3-212ENST00000558223 KRTAP8-1Q8IUC2 63 aa2.84□□□□□ -1.95
MARK3-212ENST00000558223 MT1XP80297 61 aa2.83□□□□□ -1.96
MARK3-212ENST00000558223 FAT4Q6V0I7 4981 aa2.82□□□□□ -1.96
MARK3-212ENST00000558223 UBR4Q5T4S7 5183 aa2.81□□□□□ -1.96
MARK3-212ENST00000558223 LCE3DQ9BYE3 92 aa2.77□□□□□ -1.97
MARK3-212ENST00000558223 KRTAP12-3P60328 96 aa2.74□□□□□ -1.97
MARK3-212ENST00000558223 KRTAP6-3Q3LI67 103 aa2.71□□□□□ -1.98
MARK3-212ENST00000558223 KRTAP5-5Q701N2 237 aaPredicted RBP2.64□□□□□ -1.99
MARK3-212ENST00000558223 KRTAP19-6Q3LI70 58 aa2.61□□□□□ -1.99
MARK3-212ENST00000558223 KRTAP19-5Q3LI72 72 aa2.6□□□□□ -1.99
MARK3-212ENST00000558223 KRTAP12-4P60329 112 aa2.52□□□□□ -2.01
MARK3-212ENST00000558223 KRTAP19-7Q3SYF9 63 aa2.52□□□□□ -2.01
MARK3-212ENST00000558223 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
MARK3-212ENST00000558223 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
MARK3-212ENST00000558223 MT1EP04732 61 aa2.49□□□□□ -2.01
MARK3-212ENST00000558223 USH2AO75445 5202 aa2.47□□□□□ -2.01
MARK3-212ENST00000558223 MT1LQ93083 61 aa2.47□□□□□ -2.01
MARK3-212ENST00000558223 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
MARK3-212ENST00000558223 MT1GP13640 62 aa2.43□□□□□ -2.02
MARK3-212ENST00000558223 KRTAP19-3Q7Z4W3 81 aa2.39□□□□□ -2.03
MARK3-212ENST00000558223 SSPOA2VEC9 5147 aa2.38□□□□□ -2.03
MARK3-212ENST00000558223 KRTAP2-3P0C7H8 128 aa2.34□□□□□ -2.03
MARK3-212ENST00000558223 KRTAP2-4Q9BYR9 128 aa2.34□□□□□ -2.03
MARK3-212ENST00000558223 KRTAP2-1Q9BYU5 128 aa2.34□□□□□ -2.03
MARK3-212ENST00000558223 FSIP2Q5CZC0 6907 aa2.32□□□□□ -2.04
MARK3-212ENST00000558223 MT1MQ8N339 61 aa2.32□□□□□ -2.04
MARK3-212ENST00000558223 SPRR2FQ96RM1 72 aa2.3□□□□□ -2.04
MARK3-212ENST00000558223 CRCT1Q9UGL9 99 aa2.27□□□□□ -2.05
MARK3-212ENST00000558223 FCGBPQ9Y6R7 5405 aaPredicted RBP2.23□□□□□ -2.05
MARK3-212ENST00000558223 KMT2DO14686 5537 aa2.22□□□□□ -2.05
MARK3-212ENST00000558223 SPRR2EP22531 72 aa2.14□□□□□ -2.07
MARK3-212ENST00000558223 SPRR2BP35325 72 aa2.14□□□□□ -2.07
MARK3-212ENST00000558223 SPRR2AP35326 72 aa2.14□□□□□ -2.07
MARK3-212ENST00000558223 MT1AP04731 61 aa2.13□□□□□ -2.07
MARK3-212ENST00000558223 SYNE2Q8WXH0 6885 aaKnown RBP2.08□□□□□ -2.08
MARK3-212ENST00000558223 SPRR2DP22532 72 aa2.07□□□□□ -2.08
MARK3-212ENST00000558223 MACF1Q9UPN3 7388 aaKnown RBP2.07□□□□□ -2.08
MARK3-212ENST00000558223 NEBP20929 6669 aa2.06□□□□□ -2.08
MARK3-212ENST00000558223 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
MARK3-212ENST00000558223 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
MARK3-212ENST00000558223 MUC12Q9UKN1 5478 aa2.04□□□□□ -2.08
MARK3-212ENST00000558223 KRTAP6-1Q3LI64 71 aa2.03□□□□□ -2.08
MARK3-212ENST00000558223 MDN1Q9NU22 5596 aa1.95□□□□□ -2.1
MARK3-212ENST00000558223 DSTQ03001 7570 aaKnown RBP1.92□□□□□ -2.1
MARK3-212ENST00000558223 GPR98Q8WXG9 6306 aa1.92□□□□□ -2.1
MARK3-212ENST00000558223 SYNE1Q8NF91 8797 aaKnown RBP1.85□□□□□ -2.11
MARK3-212ENST00000558223 KRTAP6-2Q3LI66 62 aa1.85□□□□□ -2.11
MARK3-212ENST00000558223 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
MARK3-212ENST00000558223 KRTAP20-1Q3LI63 56 aa1.81□□□□□ -2.12
MARK3-212ENST00000558223 KRTAP20-2Q3LI61 65 aa1.77□□□□□ -2.13
MARK3-212ENST00000558223 PRM1P04553 51 aa1.73□□□□□ -2.13
MARK3-212ENST00000558223 MT4P47944 62 aa1.73□□□□□ -2.13
MARK3-212ENST00000558223 HMCN1Q96RW7 5635 aa1.7□□□□□ -2.14
MARK3-212ENST00000558223 AHNAK2Q8IVF2 5795 aa1.67□□□□□ -2.14
MARK3-212ENST00000558223 KRTAP5-10Q6L8G5 202 aa1.52□□□□□ -2.17
MARK3-212ENST00000558223 AHNAKQ09666 5890 aaKnown RBP1.51□□□□□ -2.17
MARK3-212ENST00000558223 MUC5BQ9HC84 5762 aaPredicted RBP1.42□□□□□ -2.18
MARK3-212ENST00000558223 MUC5ACP98088 5654 aa1.4□□□□□ -2.19
MARK3-212ENST00000558223 PHGR1C9JFL3 82 aa1.13□□□□□ -2.23
MARK3-212ENST00000558223 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
MARK3-212ENST00000558223 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 483 ms