RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 KRTAP2-2Q9BYT5 123 aa4.92□□□□□ -1.62
RCCD1-209ENST00000557750 KRTAP2-1Q9BYU5 128 aa4.92□□□□□ -1.62
RCCD1-209ENST00000557750 KRTAP10-7P60409 375 aaPredicted RBP4.9□□□□□ -1.62
RCCD1-209ENST00000557750 LCE1AQ5T7P2 110 aa4.86□□□□□ -1.63
RCCD1-209ENST00000557750 KRTAP10-12P60413 245 aa4.85□□□□□ -1.63
RCCD1-209ENST00000557750 GPR98Q8WXG9 6306 aa4.83□□□□□ -1.64
RCCD1-209ENST00000557750 KRTAP8-1Q8IUC2 63 aa4.83□□□□□ -1.64
RCCD1-209ENST00000557750 KRTAP4-8A0A0G2JLE6 195 aa4.82□□□□□ -1.64
RCCD1-209ENST00000557750 KRTAP4-8Q9BYQ9 185 aa4.82□□□□□ -1.64
RCCD1-209ENST00000557750 SPRR2DP22532 72 aa4.8□□□□□ -1.64
RCCD1-209ENST00000557750 KRTAP23-1A1A580 65 aa4.77□□□□□ -1.65
RCCD1-209ENST00000557750 TNP1P09430 55 aa4.71□□□□□ -1.66
RCCD1-209ENST00000557750 LCE3BQ5TA77 95 aa4.7□□□□□ -1.66
RCCD1-209ENST00000557750 SPRR5A0A1B0GTR4 108 aa4.62□□□□□ -1.67
RCCD1-209ENST00000557750 DSTQ03001 7570 aaKnown RBP4.6□□□□□ -1.67
RCCD1-209ENST00000557750 LCE3AQ5TA76 89 aa4.58□□□□□ -1.68
RCCD1-209ENST00000557750 KRTAP19-7Q3SYF9 63 aa4.57□□□□□ -1.68
RCCD1-209ENST00000557750 KRTAP19-5Q3LI72 72 aa4.54□□□□□ -1.68
RCCD1-209ENST00000557750 MT1EP04732 61 aa4.51□□□□□ -1.69
RCCD1-209ENST00000557750 KRTAP4-9Q9BYQ8 210 aa4.48□□□□□ -1.69
RCCD1-209ENST00000557750 INE1O15225 51 aa4.42□□□□□ -1.7
RCCD1-209ENST00000557750 KRTAP19-3Q7Z4W3 81 aa4.42□□□□□ -1.7
RCCD1-209ENST00000557750 KRTAP12-3P60328 96 aa4.41□□□□□ -1.7
RCCD1-209ENST00000557750 HMCN1Q96RW7 5635 aa4.4□□□□□ -1.71
RCCD1-209ENST00000557750 LCE5AQ5TCM9 118 aa4.38□□□□□ -1.71
RCCD1-209ENST00000557750 MT1LQ93083 61 aa4.36□□□□□ -1.71
RCCD1-209ENST00000557750 MT1GP13640 62 aa4.35□□□□□ -1.71
RCCD1-209ENST00000557750 AHNAK2Q8IVF2 5795 aa4.34□□□□□ -1.71
RCCD1-209ENST00000557750 LCE1DQ5T752 114 aa4.33□□□□□ -1.72
RCCD1-209ENST00000557750 MT1MQ8N339 61 aa4.28□□□□□ -1.72
RCCD1-209ENST00000557750 MT4P47944 62 aa4.24□□□□□ -1.73
RCCD1-209ENST00000557750 LCE4AQ5TA78 99 aa4.22□□□□□ -1.73
RCCD1-209ENST00000557750 KRTAP5-10Q6L8G5 202 aa4.18□□□□□ -1.74
RCCD1-209ENST00000557750 KRTAP4-7Q9BYR0 210 aa4.18□□□□□ -1.74
RCCD1-209ENST00000557750 KRTAP4-3Q9BYR4 195 aa4.18□□□□□ -1.74
RCCD1-209ENST00000557750 KRTAP19-4Q3LI73 84 aa4.14□□□□□ -1.75
RCCD1-209ENST00000557750 KRTAP4-6Q9BYQ5 205 aa4.1□□□□□ -1.75
RCCD1-209ENST00000557750 KRTAP5-4Q6L8H1 288 aa4.09□□□□□ -1.76
RCCD1-209ENST00000557750 LCE3CQ5T5A8 94 aa4.08□□□□□ -1.76
RCCD1-209ENST00000557750 KRTAP5-7Q6L8G8 165 aa4.06□□□□□ -1.76
RCCD1-209ENST00000557750 KRTAP5-3Q6L8H2 238 aa4.01□□□□□ -1.77
RCCD1-209ENST00000557750 LOC100996750A0A140TA64 210 aa3.94□□□□□ -1.78
RCCD1-209ENST00000557750 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
RCCD1-209ENST00000557750 KRTAP5-5Q701N2 237 aaPredicted RBP3.88□□□□□ -1.79
RCCD1-209ENST00000557750 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.8
RCCD1-209ENST00000557750 SYNE1Q8NF91 8797 aaKnown RBP3.78□□□□□ -1.8
RCCD1-209ENST00000557750 KRTAP12-4P60329 112 aa3.75□□□□□ -1.81
RCCD1-209ENST00000557750 MT1AP04731 61 aa3.71□□□□□ -1.81
RCCD1-209ENST00000557750 AHNAKQ09666 5890 aaKnown RBP3.71□□□□□ -1.82
RCCD1-209ENST00000557750 KRTAP6-1Q3LI64 71 aa3.68□□□□□ -1.82
RCCD1-209ENST00000557750 MUC5BQ9HC84 5762 aaPredicted RBP3.64□□□□□ -1.83
RCCD1-209ENST00000557750 KRTAP4-11Q9BYQ6 195 aa3.63□□□□□ -1.83
RCCD1-209ENST00000557750 MUC5ACP98088 5654 aa3.61□□□□□ -1.83
RCCD1-209ENST00000557750 KRTAP9-4Q9BYQ2 154 aa3.56□□□□□ -1.84
RCCD1-209ENST00000557750 KRTAP5-2Q701N4 177 aa3.53□□□□□ -1.84
RCCD1-209ENST00000557750 KRTAP5-8O75690 187 aa3.52□□□□□ -1.85
RCCD1-209ENST00000557750 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
RCCD1-209ENST00000557750 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
RCCD1-209ENST00000557750 MT3P25713 68 aa3.39□□□□□ -1.87
RCCD1-209ENST00000557750 KRTAP9-9Q9BYP9 154 aa3.38□□□□□ -1.87
RCCD1-209ENST00000557750 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
RCCD1-209ENST00000557750 LCE3EQ5T5B0 92 aa3.03□□□□□ -1.92
RCCD1-209ENST00000557750 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
RCCD1-209ENST00000557750 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
RCCD1-209ENST00000557750 PRM1P04553 51 aa2.94□□□□□ -1.94
RCCD1-209ENST00000557750 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
RCCD1-209ENST00000557750 KRTAP4-2Q9BYR5 136 aa2.84□□□□□ -1.95
RCCD1-209ENST00000557750 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
RCCD1-209ENST00000557750 KRTAP4-12Q9BQ66 201 aa2.71□□□□□ -1.98
RCCD1-209ENST00000557750 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -2
RCCD1-209ENST00000557750 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
RCCD1-209ENST00000557750 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
RCCD1-209ENST00000557750 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
RCCD1-209ENST00000557750 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
RCCD1-209ENST00000557750 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
RCCD1-209ENST00000557750 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
RCCD1-209ENST00000557750 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
RCCD1-209ENST00000557750 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 12.4 ms