RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 KRTAP12-3P60328 96 aa4.04□□□□□ -1.76
SUPT16H-207ENST00000557394 KRTAP10-5P60370 271 aa3.97□□□□□ -1.77
SUPT16H-207ENST00000557394 KRTAP19-8Q3LI54 63 aa3.94□□□□□ -1.78
SUPT16H-207ENST00000557394 MT1XP80297 61 aa3.92□□□□□ -1.78
SUPT16H-207ENST00000557394 MT1BP07438 61 aa3.86□□□□□ -1.79
SUPT16H-207ENST00000557394 LCE3CQ5T5A8 94 aa3.84□□□□□ -1.79
SUPT16H-207ENST00000557394 KRTAP10-7P60409 375 aaPredicted RBP3.83□□□□□ -1.8
SUPT16H-207ENST00000557394 LCE1AQ5T7P2 110 aa3.83□□□□□ -1.8
SUPT16H-207ENST00000557394 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
SUPT16H-207ENST00000557394 KRTAP2-3P0C7H8 128 aa3.8□□□□□ -1.8
SUPT16H-207ENST00000557394 KRTAP2-4Q9BYR9 128 aa3.8□□□□□ -1.8
SUPT16H-207ENST00000557394 KRTAP2-1Q9BYU5 128 aa3.8□□□□□ -1.8
SUPT16H-207ENST00000557394 LCE1EQ5T753 118 aa3.76□□□□□ -1.81
SUPT16H-207ENST00000557394 KRTAP9-6A8MVA2 160 aa3.75□□□□□ -1.81
SUPT16H-207ENST00000557394 USH2AO75445 5202 aa3.75□□□□□ -1.81
SUPT16H-207ENST00000557394 CRCT1Q9UGL9 99 aa3.74□□□□□ -1.81
SUPT16H-207ENST00000557394 KRTAP19-5Q3LI72 72 aa3.73□□□□□ -1.81
SUPT16H-207ENST00000557394 KRTAP6-3Q3LI67 103 aa3.73□□□□□ -1.81
SUPT16H-207ENST00000557394 KRTAP19-6Q3LI70 58 aa3.66□□□□□ -1.82
SUPT16H-207ENST00000557394 SSPOA2VEC9 5147 aa3.64□□□□□ -1.83
SUPT16H-207ENST00000557394 FSIP2Q5CZC0 6907 aa3.6□□□□□ -1.83
SUPT16H-207ENST00000557394 KRTAP12-4P60329 112 aa3.56□□□□□ -1.84
SUPT16H-207ENST00000557394 FCGBPQ9Y6R7 5405 aaPredicted RBP3.5□□□□□ -1.85
SUPT16H-207ENST00000557394 KRTAP19-7Q3SYF9 63 aa3.5□□□□□ -1.85
SUPT16H-207ENST00000557394 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
SUPT16H-207ENST00000557394 MT1LQ93083 61 aa3.43□□□□□ -1.86
SUPT16H-207ENST00000557394 KMT2DO14686 5537 aa3.4□□□□□ -1.86
SUPT16H-207ENST00000557394 MT1EP04732 61 aa3.36□□□□□ -1.87
SUPT16H-207ENST00000557394 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.87
SUPT16H-207ENST00000557394 MACF1Q9UPN3 7388 aaKnown RBP3.34□□□□□ -1.88
SUPT16H-207ENST00000557394 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
SUPT16H-207ENST00000557394 KRTAP5-9P26371 169 aa3.28□□□□□ -1.88
SUPT16H-207ENST00000557394 MT3P25713 68 aa3.27□□□□□ -1.89
SUPT16H-207ENST00000557394 SYNE2Q8WXH0 6885 aaKnown RBP3.24□□□□□ -1.89
SUPT16H-207ENST00000557394 SPRR2FQ96RM1 72 aa3.22□□□□□ -1.89
SUPT16H-207ENST00000557394 MT1GP13640 62 aa3.19□□□□□ -1.9
SUPT16H-207ENST00000557394 KRTAP4-3Q9BYR4 195 aa3.18□□□□□ -1.9
SUPT16H-207ENST00000557394 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
SUPT16H-207ENST00000557394 KRTAP20-1Q3LI63 56 aa3.13□□□□□ -1.91
SUPT16H-207ENST00000557394 KRTAP19-3Q7Z4W3 81 aa3.12□□□□□ -1.91
SUPT16H-207ENST00000557394 MT1AP04731 61 aa3.11□□□□□ -1.91
SUPT16H-207ENST00000557394 MT1MQ8N339 61 aa3.11□□□□□ -1.91
SUPT16H-207ENST00000557394 MUC12Q9UKN1 5478 aa3.1□□□□□ -1.91
SUPT16H-207ENST00000557394 SPRR2EP22531 72 aa3.1□□□□□ -1.91
SUPT16H-207ENST00000557394 SPRR2BP35325 72 aa3.1□□□□□ -1.91
SUPT16H-207ENST00000557394 SPRR2AP35326 72 aa3.1□□□□□ -1.91
SUPT16H-207ENST00000557394 KRTAP5-5Q701N2 237 aaPredicted RBP3.07□□□□□ -1.92
SUPT16H-207ENST00000557394 GPR98Q8WXG9 6306 aa3.07□□□□□ -1.92
SUPT16H-207ENST00000557394 PRM1P04553 51 aa3.05□□□□□ -1.92
SUPT16H-207ENST00000557394 NEBP20929 6669 aa3.05□□□□□ -1.92
SUPT16H-207ENST00000557394 MDN1Q9NU22 5596 aa3.02□□□□□ -1.93
SUPT16H-207ENST00000557394 SPRR2DP22532 72 aa2.99□□□□□ -1.93
SUPT16H-207ENST00000557394 KRTAP5-4Q6L8H1 288 aa2.99□□□□□ -1.93
SUPT16H-207ENST00000557394 HMCN1Q96RW7 5635 aa2.97□□□□□ -1.93
SUPT16H-207ENST00000557394 SYNE1Q8NF91 8797 aaKnown RBP2.93□□□□□ -1.94
SUPT16H-207ENST00000557394 KRTAP6-1Q3LI64 71 aa2.9□□□□□ -1.95
SUPT16H-207ENST00000557394 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.95
SUPT16H-207ENST00000557394 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
SUPT16H-207ENST00000557394 DSTQ03001 7570 aaKnown RBP2.8□□□□□ -1.96
SUPT16H-207ENST00000557394 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
SUPT16H-207ENST00000557394 KRTAP5-2Q701N4 177 aa2.65□□□□□ -1.98
SUPT16H-207ENST00000557394 OBSCNQ5VST9 7968 aa2.61□□□□□ -1.99
SUPT16H-207ENST00000557394 MT4P47944 62 aa2.58□□□□□ -2
SUPT16H-207ENST00000557394 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
SUPT16H-207ENST00000557394 KRTAP5-8O75690 187 aa2.54□□□□□ -2
SUPT16H-207ENST00000557394 KRTAP20-2Q3LI61 65 aa2.51□□□□□ -2.01
SUPT16H-207ENST00000557394 KRTAP5-7Q6L8G8 165 aa2.47□□□□□ -2.01
SUPT16H-207ENST00000557394 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
SUPT16H-207ENST00000557394 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
SUPT16H-207ENST00000557394 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
SUPT16H-207ENST00000557394 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
SUPT16H-207ENST00000557394 AHNAKQ09666 5890 aaKnown RBP2.35□□□□□ -2.03
SUPT16H-207ENST00000557394 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
SUPT16H-207ENST00000557394 MUC5ACP98088 5654 aa2.18□□□□□ -2.06
SUPT16H-207ENST00000557394 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
SUPT16H-207ENST00000557394 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
SUPT16H-207ENST00000557394 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
SUPT16H-207ENST00000557394 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 12.4 ms