RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 KRTAP4-3Q9BYR4 195 aa6.59□□□□□ -1.35
FOXN3-214ENST00000557258 LCE2DQ5TA82 110 aaPredicted RBP6.55□□□□□ -1.36
FOXN3-214ENST00000557258 SYNE2Q8WXH0 6885 aaKnown RBP6.51□□□□□ -1.37
FOXN3-214ENST00000557258 LOC100996750A0A140TA64 210 aa6.5□□□□□ -1.37
FOXN3-214ENST00000557258 CRCT1Q9UGL9 99 aa6.41□□□□□ -1.38
FOXN3-214ENST00000557258 MT1GP13640 62 aa6.4□□□□□ -1.38
FOXN3-214ENST00000557258 SPRR2FQ96RM1 72 aa6.38□□□□□ -1.39
FOXN3-214ENST00000557258 KRTAP19-3Q7Z4W3 81 aa6.36□□□□□ -1.39
FOXN3-214ENST00000557258 MT1MQ8N339 61 aa6.34□□□□□ -1.39
FOXN3-214ENST00000557258 MDN1Q9NU22 5596 aa6.3□□□□□ -1.4
FOXN3-214ENST00000557258 KRTAP2-3P0C7H8 128 aa6.3□□□□□ -1.4
FOXN3-214ENST00000557258 KRTAP2-4Q9BYR9 128 aa6.3□□□□□ -1.4
FOXN3-214ENST00000557258 KRTAP2-1Q9BYU5 128 aa6.3□□□□□ -1.4
FOXN3-214ENST00000557258 KRTAP19-4Q3LI73 84 aa6.27□□□□□ -1.41
FOXN3-214ENST00000557258 KRTAP9-2Q9BYQ4 174 aa6.22□□□□□ -1.41
FOXN3-214ENST00000557258 LCE5AQ5TCM9 118 aa6.16□□□□□ -1.42
FOXN3-214ENST00000557258 SYNE1Q8NF91 8797 aaKnown RBP6.07□□□□□ -1.44
FOXN3-214ENST00000557258 LCE1AQ5T7P2 110 aa5.9□□□□□ -1.46
FOXN3-214ENST00000557258 LCE3BQ5TA77 95 aa5.88□□□□□ -1.47
FOXN3-214ENST00000557258 SPRR2EP22531 72 aa5.84□□□□□ -1.47
FOXN3-214ENST00000557258 SPRR2BP35325 72 aa5.84□□□□□ -1.47
FOXN3-214ENST00000557258 SPRR2AP35326 72 aa5.84□□□□□ -1.47
FOXN3-214ENST00000557258 KRTAP5-9P26371 169 aa5.82□□□□□ -1.48
FOXN3-214ENST00000557258 KRTAP4-9Q9BYQ8 210 aa5.79□□□□□ -1.48
FOXN3-214ENST00000557258 KRTAP6-1Q3LI64 71 aa5.78□□□□□ -1.48
FOXN3-214ENST00000557258 OBSCNQ5VST9 7968 aa5.7□□□□□ -1.5
FOXN3-214ENST00000557258 KRTAP12-4P60329 112 aa5.65□□□□□ -1.51
FOXN3-214ENST00000557258 MT1AP04731 61 aa5.59□□□□□ -1.51
FOXN3-214ENST00000557258 SPRR2DP22532 72 aa5.57□□□□□ -1.52
FOXN3-214ENST00000557258 KRTAP5-5Q701N2 237 aaPredicted RBP5.57□□□□□ -1.52
FOXN3-214ENST00000557258 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.57□□□□□ -1.52
FOXN3-214ENST00000557258 KRTAP6-3Q3LI67 103 aa5.42□□□□□ -1.54
FOXN3-214ENST00000557258 KRTAP9-6A0A140TA67 174 aa5.4□□□□□ -1.55
FOXN3-214ENST00000557258 LCE3DQ9BYE3 92 aa5.34□□□□□ -1.55
FOXN3-214ENST00000557258 KRTAP9-4Q9BYQ2 154 aa5.3□□□□□ -1.56
FOXN3-214ENST00000557258 NEBP20929 6669 aa5.25□□□□□ -1.57
FOXN3-214ENST00000557258 KRTAP6-2Q3LI66 62 aa5.24□□□□□ -1.57
FOXN3-214ENST00000557258 LCE3EQ5T5B0 92 aa5.22□□□□□ -1.57
FOXN3-214ENST00000557258 KRTAP9-7A8MTY7 169 aa5.15□□□□□ -1.58
FOXN3-214ENST00000557258 MT3P25713 68 aa5.04□□□□□ -1.6
FOXN3-214ENST00000557258 MT4P47944 62 aa5.04□□□□□ -1.6
FOXN3-214ENST00000557258 KRTAP4-6Q9BYQ5 205 aa5.02□□□□□ -1.61
FOXN3-214ENST00000557258 PRM1P04553 51 aa4.99□□□□□ -1.61
FOXN3-214ENST00000557258 KRTAP5-4Q6L8H1 288 aa4.96□□□□□ -1.62
FOXN3-214ENST00000557258 HMCN1Q96RW7 5635 aa4.87□□□□□ -1.63
FOXN3-214ENST00000557258 KRTAP20-2Q3LI61 65 aa4.76□□□□□ -1.65
FOXN3-214ENST00000557258 LCE1DQ5T752 114 aa4.69□□□□□ -1.66
FOXN3-214ENST00000557258 LCE4AQ5TA78 99 aa4.67□□□□□ -1.66
FOXN3-214ENST00000557258 KRTAP2-2Q9BYT5 123 aa4.59□□□□□ -1.67
FOXN3-214ENST00000557258 KRTAP5-2Q701N4 177 aa4.59□□□□□ -1.67
FOXN3-214ENST00000557258 KRTAP5-3Q6L8H2 238 aa4.5□□□□□ -1.69
FOXN3-214ENST00000557258 KRTAP20-1Q3LI63 56 aa4.47□□□□□ -1.69
FOXN3-214ENST00000557258 MUC5ACP98088 5654 aa4.38□□□□□ -1.71
FOXN3-214ENST00000557258 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
FOXN3-214ENST00000557258 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
FOXN3-214ENST00000557258 KRTAP5-1Q6L8H4 278 aa4.01□□□□□ -1.77
FOXN3-214ENST00000557258 KRTAP4-11Q9BYQ6 195 aa4□□□□□ -1.77
FOXN3-214ENST00000557258 KRTAP4-2Q9BYR5 136 aa4□□□□□ -1.77
FOXN3-214ENST00000557258 KRTAP5-10Q6L8G5 202 aa3.92□□□□□ -1.78
FOXN3-214ENST00000557258 LCE1CQ5T751 118 aa3.89□□□□□ -1.79
FOXN3-214ENST00000557258 AHNAK2Q8IVF2 5795 aa3.88□□□□□ -1.79
FOXN3-214ENST00000557258 KRTAP5-8O75690 187 aa3.82□□□□□ -1.8
FOXN3-214ENST00000557258 MUC5BQ9HC84 5762 aaPredicted RBP3.7□□□□□ -1.82
FOXN3-214ENST00000557258 KRTAP21-2Q3LI59 83 aa3.68□□□□□ -1.82
FOXN3-214ENST00000557258 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.59□□□□□ -1.83
FOXN3-214ENST00000557258 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
FOXN3-214ENST00000557258 KRTAP5-7Q6L8G8 165 aa3.57□□□□□ -1.84
FOXN3-214ENST00000557258 MUC19Q7Z5P9 8384 aa3.53□□□□□ -1.84
FOXN3-214ENST00000557258 KRTAP4-12Q9BQ66 201 aa3.48□□□□□ -1.85
FOXN3-214ENST00000557258 GPR98Q8WXG9 6306 aa3.42□□□□□ -1.86
FOXN3-214ENST00000557258 KRTAP5-11Q6L8G4 156 aa3.36□□□□□ -1.87
FOXN3-214ENST00000557258 KRTAP9-9Q9BYP9 154 aa3.27□□□□□ -1.89
FOXN3-214ENST00000557258 KRTAP21-1Q3LI58 79 aa3.04□□□□□ -1.92
FOXN3-214ENST00000557258 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
FOXN3-214ENST00000557258 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
FOXN3-214ENST00000557258 AHNAKQ09666 5890 aaKnown RBP2.8□□□□□ -1.96
FOXN3-214ENST00000557258 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 11.9 ms