RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 SMIM26A0A096LP01 95 aa4.45□□□□□ -1.7
SLIRP-205ENST00000556310 KRTAP2-3P0C7H8 128 aa4.45□□□□□ -1.7
SLIRP-205ENST00000556310 KRTAP2-4Q9BYR9 128 aa4.45□□□□□ -1.7
SLIRP-205ENST00000556310 TMEM258P61165 79 aa4.43□□□□□ -1.7
SLIRP-205ENST00000556310 PRR15LQ9BU68 103 aa4.42□□□□□ -1.7
SLIRP-205ENST00000556310 SPRR2DP22532 72 aa4.4□□□□□ -1.71
SLIRP-205ENST00000556310 A8MU10 97 aa4.39□□□□□ -1.71
SLIRP-205ENST00000556310 LINC01558Q9Y6Z2 57 aa4.38□□□□□ -1.71
SLIRP-205ENST00000556310 KRTAP19-7Q3SYF9 63 aa4.33□□□□□ -1.72
SLIRP-205ENST00000556310 LCE1EQ5T753 118 aa4.33□□□□□ -1.72
SLIRP-205ENST00000556310 KRTAP2-1Q9BYU5 128 aa4.32□□□□□ -1.72
SLIRP-205ENST00000556310 MT1EP04732 61 aa4.3□□□□□ -1.72
SLIRP-205ENST00000556310 UQCR11O14957 56 aa4.27□□□□□ -1.73
SLIRP-205ENST00000556310 KRTAP19-3Q7Z4W3 81 aa4.25□□□□□ -1.73
SLIRP-205ENST00000556310 C10orf95Q9H7T3 257 aa4.25□□□□□ -1.73
SLIRP-205ENST00000556310 TNP1P09430 55 aa4.24□□□□□ -1.73
SLIRP-205ENST00000556310 RPS28P62857 69 aaKnown RBP4.24□□□□□ -1.73
SLIRP-205ENST00000556310 LCE3CQ5T5A8 94 aa4.24□□□□□ -1.73
SLIRP-205ENST00000556310 KRTAP19-5Q3LI72 72 aa4.23□□□□□ -1.73
SLIRP-205ENST00000556310 KRTAP5-11Q6L8G4 156 aa4.2□□□□□ -1.74
SLIRP-205ENST00000556310 DSTQ03001 7570 aaKnown RBP4.19□□□□□ -1.74
SLIRP-205ENST00000556310 LCE3AQ5TA76 89 aa4.18□□□□□ -1.74
SLIRP-205ENST00000556310 MIR22HGQ0VDD5 57 aa4.17□□□□□ -1.74
SLIRP-205ENST00000556310 V9GYY9 64 aa4.17□□□□□ -1.74
SLIRP-205ENST00000556310 MT1GP13640 62 aa4.15□□□□□ -1.75
SLIRP-205ENST00000556310 Q1T7F1 81 aa4.14□□□□□ -1.75
SLIRP-205ENST00000556310 PRO0628Q9UI54 55 aa4.14□□□□□ -1.75
SLIRP-205ENST00000556310 PP632Q6XCG6 107 aa4.13□□□□□ -1.75
SLIRP-205ENST00000556310 PSPHP1O15172 72 aa4.12□□□□□ -1.75
SLIRP-205ENST00000556310 MT1LQ93083 61 aa4.12□□□□□ -1.75
SLIRP-205ENST00000556310 K7ERS5 55 aa4.09□□□□□ -1.75
SLIRP-205ENST00000556310 MT1MQ8N339 61 aa4.09□□□□□ -1.75
SLIRP-205ENST00000556310 KRTAP25-1Q3LHN0 102 aa4.04□□□□□ -1.76
SLIRP-205ENST00000556310 KRTAP12-3P60328 96 aa4.03□□□□□ -1.76
SLIRP-205ENST00000556310 GPR98Q8WXG9 6306 aa4.01□□□□□ -1.77
SLIRP-205ENST00000556310 A6NED7 52 aa4□□□□□ -1.77
SLIRP-205ENST00000556310 KRTAP4-3Q9BYR4 195 aa3.96□□□□□ -1.78
SLIRP-205ENST00000556310 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.94□□□□□ -1.78
SLIRP-205ENST00000556310 KRTAP9-6A8MVA2 160 aa3.92□□□□□ -1.78
SLIRP-205ENST00000556310 PMAIP1Q13794 54 aa3.92□□□□□ -1.78
SLIRP-205ENST00000556310 HMCN1Q96RW7 5635 aa3.88□□□□□ -1.79
SLIRP-205ENST00000556310 CDC42SE1Q9NRR8 79 aa3.88□□□□□ -1.79
SLIRP-205ENST00000556310 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
SLIRP-205ENST00000556310 KRTAP5-4Q6L8H1 288 aa3.86□□□□□ -1.79
SLIRP-205ENST00000556310 MT4P47944 62 aa3.83□□□□□ -1.8
SLIRP-205ENST00000556310 ROMO1P60602 79 aa3.82□□□□□ -1.8
SLIRP-205ENST00000556310 BRK1Q8WUW1 75 aa3.82□□□□□ -1.8
SLIRP-205ENST00000556310 AHNAK2Q8IVF2 5795 aa3.75□□□□□ -1.81
SLIRP-205ENST00000556310 KRTAP5-5Q701N2 237 aaPredicted RBP3.74□□□□□ -1.81
SLIRP-205ENST00000556310 KTN1-AS1Q86SY8 53 aa3.74□□□□□ -1.81
SLIRP-205ENST00000556310 SYNE1Q8NF91 8797 aaKnown RBP3.67□□□□□ -1.82
SLIRP-205ENST00000556310 SPRR5A0A1B0GTR4 108 aa3.63□□□□□ -1.83
SLIRP-205ENST00000556310 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
SLIRP-205ENST00000556310 KRTAP12-4P60329 112 aa3.62□□□□□ -1.83
SLIRP-205ENST00000556310 KRTAP5-10Q6L8G5 202 aa3.57□□□□□ -1.84
SLIRP-205ENST00000556310 MT1AP04731 61 aa3.51□□□□□ -1.85
SLIRP-205ENST00000556310 KRTAP5-1Q6L8H4 278 aa3.49□□□□□ -1.85
SLIRP-205ENST00000556310 KRTAP6-1Q3LI64 71 aa3.47□□□□□ -1.85
SLIRP-205ENST00000556310 KRTAP5-7Q6L8G8 165 aa3.42□□□□□ -1.86
SLIRP-205ENST00000556310 KRTAP5-2Q701N4 177 aa3.4□□□□□ -1.87
SLIRP-205ENST00000556310 KRTAP6-2Q3LI66 62 aa3.3□□□□□ -1.88
SLIRP-205ENST00000556310 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
SLIRP-205ENST00000556310 LCE3DQ9BYE3 92 aa3.23□□□□□ -1.89
SLIRP-205ENST00000556310 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
SLIRP-205ENST00000556310 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
SLIRP-205ENST00000556310 AHNAKQ09666 5890 aaKnown RBP3.1□□□□□ -1.91
SLIRP-205ENST00000556310 LUZP6Q538Z0 58 aa3.09□□□□□ -1.91
SLIRP-205ENST00000556310 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
SLIRP-205ENST00000556310 MUC5ACP98088 5654 aa3.05□□□□□ -1.92
SLIRP-205ENST00000556310 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
SLIRP-205ENST00000556310 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
SLIRP-205ENST00000556310 INE1O15225 51 aa2.66□□□□□ -1.98
SLIRP-205ENST00000556310 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
SLIRP-205ENST00000556310 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
SLIRP-205ENST00000556310 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
SLIRP-205ENST00000556310 PRM1P04553 51 aa1.95□□□□□ -2.1
SLIRP-205ENST00000556310 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
SLIRP-205ENST00000556310 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 153.1 ms