RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 C10orf95Q9H7T3 257 aa4.03□□□□□ -1.76
MTHFD1-213ENST00000556284 BRK1Q8WUW1 75 aa4.02□□□□□ -1.77
MTHFD1-213ENST00000556284 KRTAP10-12P60413 245 aa4.01□□□□□ -1.77
MTHFD1-213ENST00000556284 TNP1P09430 55 aa3.97□□□□□ -1.77
MTHFD1-213ENST00000556284 ROMO1P60602 79 aa3.92□□□□□ -1.78
MTHFD1-213ENST00000556284 KRTAP25-1Q3LHN0 102 aa3.92□□□□□ -1.78
MTHFD1-213ENST00000556284 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
MTHFD1-213ENST00000556284 KRTAP8-1Q8IUC2 63 aa3.88□□□□□ -1.79
MTHFD1-213ENST00000556284 KRTAP6-3Q3LI67 103 aa3.86□□□□□ -1.79
MTHFD1-213ENST00000556284 KMT2DO14686 5537 aa3.85□□□□□ -1.79
MTHFD1-213ENST00000556284 LCE3CQ5T5A8 94 aa3.85□□□□□ -1.79
MTHFD1-213ENST00000556284 PRO0628Q9UI54 55 aa3.84□□□□□ -1.79
MTHFD1-213ENST00000556284 PMAIP1Q13794 54 aa3.83□□□□□ -1.8
MTHFD1-213ENST00000556284 MACF1Q9UPN3 7388 aaKnown RBP3.83□□□□□ -1.8
MTHFD1-213ENST00000556284 KRTAP5-9P26371 169 aa3.81□□□□□ -1.8
MTHFD1-213ENST00000556284 LCE3AQ5TA76 89 aa3.8□□□□□ -1.8
MTHFD1-213ENST00000556284 SPRR2FQ96RM1 72 aa3.77□□□□□ -1.81
MTHFD1-213ENST00000556284 PP632Q6XCG6 107 aa3.75□□□□□ -1.81
MTHFD1-213ENST00000556284 KRTAP19-7Q3SYF9 63 aa3.74□□□□□ -1.81
MTHFD1-213ENST00000556284 KRTAP19-5Q3LI72 72 aa3.73□□□□□ -1.81
MTHFD1-213ENST00000556284 SYNE2Q8WXH0 6885 aaKnown RBP3.72□□□□□ -1.81
MTHFD1-213ENST00000556284 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
MTHFD1-213ENST00000556284 MT1EP04732 61 aa3.69□□□□□ -1.82
MTHFD1-213ENST00000556284 KRTAP12-3P60328 96 aa3.68□□□□□ -1.82
MTHFD1-213ENST00000556284 MUC12Q9UKN1 5478 aa3.66□□□□□ -1.82
MTHFD1-213ENST00000556284 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
MTHFD1-213ENST00000556284 SPRR2EP22531 72 aa3.63□□□□□ -1.83
MTHFD1-213ENST00000556284 SPRR2BP35325 72 aa3.63□□□□□ -1.83
MTHFD1-213ENST00000556284 SPRR2AP35326 72 aa3.63□□□□□ -1.83
MTHFD1-213ENST00000556284 MDN1Q9NU22 5596 aa3.63□□□□□ -1.83
MTHFD1-213ENST00000556284 KRTAP19-3Q7Z4W3 81 aa3.6□□□□□ -1.83
MTHFD1-213ENST00000556284 MT1LQ93083 61 aa3.59□□□□□ -1.83
MTHFD1-213ENST00000556284 KTN1-AS1Q86SY8 53 aa3.58□□□□□ -1.84
MTHFD1-213ENST00000556284 MT1GP13640 62 aa3.56□□□□□ -1.84
MTHFD1-213ENST00000556284 SPRR2DP22532 72 aa3.51□□□□□ -1.85
MTHFD1-213ENST00000556284 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
MTHFD1-213ENST00000556284 MT1MQ8N339 61 aa3.5□□□□□ -1.85
MTHFD1-213ENST00000556284 NEBP20929 6669 aa3.49□□□□□ -1.85
MTHFD1-213ENST00000556284 KRTAP2-3P0C7H8 128 aa3.43□□□□□ -1.86
MTHFD1-213ENST00000556284 KRTAP2-4Q9BYR9 128 aa3.43□□□□□ -1.86
MTHFD1-213ENST00000556284 KRTAP20-1Q3LI63 56 aa3.41□□□□□ -1.86
MTHFD1-213ENST00000556284 KRTAP4-3Q9BYR4 195 aa3.37□□□□□ -1.87
MTHFD1-213ENST00000556284 KRTAP2-1Q9BYU5 128 aa3.34□□□□□ -1.87
MTHFD1-213ENST00000556284 DSTQ03001 7570 aaKnown RBP3.25□□□□□ -1.89
MTHFD1-213ENST00000556284 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
MTHFD1-213ENST00000556284 SPRR5A0A1B0GTR4 108 aa3.2□□□□□ -1.9
MTHFD1-213ENST00000556284 KRTAP5-5Q701N2 237 aaPredicted RBP3.17□□□□□ -1.9
MTHFD1-213ENST00000556284 KRTAP5-4Q6L8H1 288 aa3.14□□□□□ -1.91
MTHFD1-213ENST00000556284 MT1AP04731 61 aa3.06□□□□□ -1.92
MTHFD1-213ENST00000556284 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
MTHFD1-213ENST00000556284 MT4P47944 62 aa3.04□□□□□ -1.92
MTHFD1-213ENST00000556284 KRTAP12-4P60329 112 aa3.03□□□□□ -1.92
MTHFD1-213ENST00000556284 KRTAP6-1Q3LI64 71 aa3.01□□□□□ -1.93
MTHFD1-213ENST00000556284 LUZP6Q538Z0 58 aa3□□□□□ -1.93
MTHFD1-213ENST00000556284 HMCN1Q96RW7 5635 aa2.95□□□□□ -1.94
MTHFD1-213ENST00000556284 KRTAP20-2Q3LI61 65 aa2.94□□□□□ -1.94
MTHFD1-213ENST00000556284 SYNE1Q8NF91 8797 aaKnown RBP2.94□□□□□ -1.94
MTHFD1-213ENST00000556284 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
MTHFD1-213ENST00000556284 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
MTHFD1-213ENST00000556284 KRTAP6-2Q3LI66 62 aa2.82□□□□□ -1.96
MTHFD1-213ENST00000556284 KRTAP5-2Q701N4 177 aa2.81□□□□□ -1.96
MTHFD1-213ENST00000556284 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
MTHFD1-213ENST00000556284 LCE1BQ5T7P3 118 aa2.69□□□□□ -1.98
MTHFD1-213ENST00000556284 AHNAK2Q8IVF2 5795 aa2.69□□□□□ -1.98
MTHFD1-213ENST00000556284 KRTAP5-10Q6L8G5 202 aa2.65□□□□□ -1.99
MTHFD1-213ENST00000556284 GPR98Q8WXG9 6306 aa2.6□□□□□ -1.99
MTHFD1-213ENST00000556284 KRTAP5-7Q6L8G8 165 aa2.52□□□□□ -2.01
MTHFD1-213ENST00000556284 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
MTHFD1-213ENST00000556284 MUC5ACP98088 5654 aa2.35□□□□□ -2.03
MTHFD1-213ENST00000556284 INE1O15225 51 aa2.28□□□□□ -2.04
MTHFD1-213ENST00000556284 MUC5BQ9HC84 5762 aaPredicted RBP2.21□□□□□ -2.06
MTHFD1-213ENST00000556284 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
MTHFD1-213ENST00000556284 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
MTHFD1-213ENST00000556284 PRM1P04553 51 aa2.01□□□□□ -2.09
MTHFD1-213ENST00000556284 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
MTHFD1-213ENST00000556284 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
MTHFD1-213ENST00000556284 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
MTHFD1-213ENST00000556284 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 80.7 ms