RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 LOC110117498A0A087WWA1 95 aa2.55□□□□□ -2
PRKCH-220ENST00000556164 JMJD7-PLA2G4BH0Y9G9 81 aa2.55□□□□□ -2
PRKCH-220ENST00000556164 K7EQZ3 153 aa2.55□□□□□ -2
PRKCH-220ENST00000556164 SPRR2FQ96RM1 72 aa2.55□□□□□ -2
PRKCH-220ENST00000556164 LINC00208Q96KT6 92 aa2.54□□□□□ -2
PRKCH-220ENST00000556164 MDN1Q9NU22 5596 aa2.53□□□□□ -2
PRKCH-220ENST00000556164 SPATA8Q6RVD6 105 aa2.53□□□□□ -2
PRKCH-220ENST00000556164 H0Y9P7 68 aa2.52□□□□□ -2.01
PRKCH-220ENST00000556164 KRTAP2-1Q9BYU5 128 aa2.51□□□□□ -2.01
PRKCH-220ENST00000556164 KRTAP8-1Q8IUC2 63 aa2.48□□□□□ -2.01
PRKCH-220ENST00000556164 CRIPTQ9P021 101 aa2.48□□□□□ -2.01
PRKCH-220ENST00000556164 SPRR2DP22532 72 aa2.47□□□□□ -2.01
PRKCH-220ENST00000556164 KRTAP10-12P60413 245 aa2.46□□□□□ -2.02
PRKCH-220ENST00000556164 KRTAP5-11Q6L8G4 156 aa2.44□□□□□ -2.02
PRKCH-220ENST00000556164 MT1XP80297 61 aa2.43□□□□□ -2.02
PRKCH-220ENST00000556164 SPRR5A0A1B0GTR4 108 aa2.42□□□□□ -2.02
PRKCH-220ENST00000556164 INE1O15225 51 aa2.42□□□□□ -2.02
PRKCH-220ENST00000556164 COA5Q86WW8 74 aa2.42□□□□□ -2.02
PRKCH-220ENST00000556164 LCE3CQ5T5A8 94 aa2.41□□□□□ -2.02
PRKCH-220ENST00000556164 KRTAP12-2P59991 146 aa2.4□□□□□ -2.03
PRKCH-220ENST00000556164 KRTAP10-7P60409 375 aaPredicted RBP2.4□□□□□ -2.03
PRKCH-220ENST00000556164 PLAC4Q8WY50 150 aa2.4□□□□□ -2.03
PRKCH-220ENST00000556164 TP53AIP1Q9HCN2 124 aa2.39□□□□□ -2.03
PRKCH-220ENST00000556164 H0YAA0 97 aa2.38□□□□□ -2.03
PRKCH-220ENST00000556164 A0A1B0GU69 56 aa2.37□□□□□ -2.03
PRKCH-220ENST00000556164 ACYP2P14621 99 aa2.36□□□□□ -2.03
PRKCH-220ENST00000556164 M0QZ58 72 aa2.31□□□□□ -2.04
PRKCH-220ENST00000556164 GPR98Q8WXG9 6306 aa2.31□□□□□ -2.04
PRKCH-220ENST00000556164 KRTAP13-4Q3LI77 160 aa2.25□□□□□ -2.05
PRKCH-220ENST00000556164 PP632Q6XCG6 107 aa2.24□□□□□ -2.05
PRKCH-220ENST00000556164 DSTQ03001 7570 aaKnown RBP2.24□□□□□ -2.05
PRKCH-220ENST00000556164 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
PRKCH-220ENST00000556164 LCE3EQ5T5B0 92 aa2.19□□□□□ -2.06
PRKCH-220ENST00000556164 KRTAP19-3Q7Z4W3 81 aa2.19□□□□□ -2.06
PRKCH-220ENST00000556164 MT4P47944 62 aa2.18□□□□□ -2.06
PRKCH-220ENST00000556164 MT1EP04732 61 aa2.17□□□□□ -2.06
PRKCH-220ENST00000556164 KRTAP19-7Q3SYF9 63 aa2.17□□□□□ -2.06
PRKCH-220ENST00000556164 LCE1EQ5T753 118 aa2.16□□□□□ -2.06
PRKCH-220ENST00000556164 KRTAP5-4Q6L8H1 288 aa2.16□□□□□ -2.06
PRKCH-220ENST00000556164 KRTAP4-4Q9BYR3 166 aa2.14□□□□□ -2.07
PRKCH-220ENST00000556164 KRTAP5-10Q6L8G5 202 aa2.13□□□□□ -2.07
PRKCH-220ENST00000556164 HMCN1Q96RW7 5635 aa2.1□□□□□ -2.07
PRKCH-220ENST00000556164 MT1GP13640 62 aa2.1□□□□□ -2.07
PRKCH-220ENST00000556164 AHNAK2Q8IVF2 5795 aa2.1□□□□□ -2.07
PRKCH-220ENST00000556164 KRTAP19-5Q3LI72 72 aa2.08□□□□□ -2.08
PRKCH-220ENST00000556164 KRTAP5-7Q6L8G8 165 aa2.08□□□□□ -2.08
PRKCH-220ENST00000556164 MT1MQ8N339 61 aa2.08□□□□□ -2.08
PRKCH-220ENST00000556164 A0A0D9SG42 100 aa2.07□□□□□ -2.08
PRKCH-220ENST00000556164 KRTAP4-3Q9BYR4 195 aa2.05□□□□□ -2.08
PRKCH-220ENST00000556164 KRTAP12-1P59990 96 aa2.04□□□□□ -2.08
PRKCH-220ENST00000556164 MT1LQ93083 61 aa2.04□□□□□ -2.08
PRKCH-220ENST00000556164 KRTAP20-2Q3LI61 65 aa1.98□□□□□ -2.09
PRKCH-220ENST00000556164 LCE3DQ9BYE3 92 aa1.97□□□□□ -2.09
PRKCH-220ENST00000556164 C10orf95Q9H7T3 257 aa1.97□□□□□ -2.09
PRKCH-220ENST00000556164 LCE3AQ5TA76 89 aa1.95□□□□□ -2.1
PRKCH-220ENST00000556164 KRTAP12-4P60329 112 aa1.92□□□□□ -2.1
PRKCH-220ENST00000556164 KRTAP5-5Q701N2 237 aaPredicted RBP1.91□□□□□ -2.1
PRKCH-220ENST00000556164 TNP1P09430 55 aa1.9□□□□□ -2.11
PRKCH-220ENST00000556164 KRTAP9-6A8MVA2 160 aa1.87□□□□□ -2.11
PRKCH-220ENST00000556164 KRTAP12-3P60328 96 aa1.87□□□□□ -2.11
PRKCH-220ENST00000556164 OBSCNQ5VST9 7968 aa1.87□□□□□ -2.11
PRKCH-220ENST00000556164 KRTAP5-2Q701N4 177 aa1.85□□□□□ -2.11
PRKCH-220ENST00000556164 KRTAP5-8O75690 187 aa1.8□□□□□ -2.12
PRKCH-220ENST00000556164 SYNE1Q8NF91 8797 aaKnown RBP1.78□□□□□ -2.12
PRKCH-220ENST00000556164 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
PRKCH-220ENST00000556164 MT1AP04731 61 aa1.74□□□□□ -2.13
PRKCH-220ENST00000556164 KRTAP6-1Q3LI64 71 aa1.74□□□□□ -2.13
PRKCH-220ENST00000556164 MUC5ACP98088 5654 aa1.73□□□□□ -2.13
PRKCH-220ENST00000556164 MUC5BQ9HC84 5762 aaPredicted RBP1.72□□□□□ -2.13
PRKCH-220ENST00000556164 KRTAP6-2Q3LI66 62 aa1.7□□□□□ -2.14
PRKCH-220ENST00000556164 LCE1BQ5T7P3 118 aa1.45□□□□□ -2.18
PRKCH-220ENST00000556164 LCE1CQ5T751 118 aa1.39□□□□□ -2.19
PRKCH-220ENST00000556164 PHGR1C9JFL3 82 aa1.27□□□□□ -2.21
PRKCH-220ENST00000556164 MUC19Q7Z5P9 8384 aa1.2□□□□□ -2.22
PRKCH-220ENST00000556164 KRTAP21-2Q3LI59 83 aa1.14□□□□□ -2.23
PRKCH-220ENST00000556164 PRM1P04553 51 aa1.13□□□□□ -2.23
PRKCH-220ENST00000556164 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
PRKCH-220ENST00000556164 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms