RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 KRTAP19-4Q3LI73 84 aa5.51□□□□□ -1.53
SNX6-206ENST00000556162 C10orf95Q9H7T3 257 aa5.51□□□□□ -1.53
SNX6-206ENST00000556162 KRTAP4-2Q9BYR5 136 aa5.5□□□□□ -1.53
SNX6-206ENST00000556162 SPRR2FQ96RM1 72 aa5.48□□□□□ -1.53
SNX6-206ENST00000556162 MDN1Q9NU22 5596 aa5.47□□□□□ -1.53
SNX6-206ENST00000556162 NEBP20929 6669 aa5.47□□□□□ -1.53
SNX6-206ENST00000556162 TNP1P09430 55 aa5.47□□□□□ -1.53
SNX6-206ENST00000556162 ROMO1P60602 79 aa5.43□□□□□ -1.54
SNX6-206ENST00000556162 KRTAP25-1Q3LHN0 102 aa5.43□□□□□ -1.54
SNX6-206ENST00000556162 KRTAP4-11Q9BYQ6 195 aa5.41□□□□□ -1.54
SNX6-206ENST00000556162 LCE5AQ5TCM9 118 aa5.33□□□□□ -1.56
SNX6-206ENST00000556162 SPRR2EP22531 72 aa5.31□□□□□ -1.56
SNX6-206ENST00000556162 SPRR2BP35325 72 aa5.31□□□□□ -1.56
SNX6-206ENST00000556162 SPRR2AP35326 72 aa5.31□□□□□ -1.56
SNX6-206ENST00000556162 LCE3AQ5TA76 89 aa5.3□□□□□ -1.56
SNX6-206ENST00000556162 KRTAP19-7Q3SYF9 63 aa5.28□□□□□ -1.56
SNX6-206ENST00000556162 LCE1AQ5T7P2 110 aa5.28□□□□□ -1.56
SNX6-206ENST00000556162 KRTAP19-5Q3LI72 72 aa5.25□□□□□ -1.57
SNX6-206ENST00000556162 MT1EP04732 61 aa5.22□□□□□ -1.57
SNX6-206ENST00000556162 SPRR2DP22532 72 aa5.13□□□□□ -1.59
SNX6-206ENST00000556162 KRTAP19-3Q7Z4W3 81 aa5.12□□□□□ -1.59
SNX6-206ENST00000556162 KRTAP12-3P60328 96 aa5.11□□□□□ -1.59
SNX6-206ENST00000556162 KRTAP20-1Q3LI63 56 aa5.1□□□□□ -1.59
SNX6-206ENST00000556162 KRTAP2-3P0C7H8 128 aa5.07□□□□□ -1.6
SNX6-206ENST00000556162 KRTAP2-4Q9BYR9 128 aa5.07□□□□□ -1.6
SNX6-206ENST00000556162 MT1GP13640 62 aa5.05□□□□□ -1.6
SNX6-206ENST00000556162 MT1LQ93083 61 aa5.05□□□□□ -1.6
SNX6-206ENST00000556162 PP632Q6XCG6 107 aa5.03□□□□□ -1.6
SNX6-206ENST00000556162 DSTQ03001 7570 aaKnown RBP4.98□□□□□ -1.61
SNX6-206ENST00000556162 MT1MQ8N339 61 aa4.95□□□□□ -1.62
SNX6-206ENST00000556162 KRTAP2-2Q9BYT5 123 aa4.93□□□□□ -1.62
SNX6-206ENST00000556162 KRTAP2-1Q9BYU5 128 aa4.93□□□□□ -1.62
SNX6-206ENST00000556162 KRTAP15-1Q3LI76 137 aa4.91□□□□□ -1.62
SNX6-206ENST00000556162 KRTAP5-3Q6L8H2 238 aa4.88□□□□□ -1.63
SNX6-206ENST00000556162 KRTAP4-3Q9BYR4 195 aa4.82□□□□□ -1.64
SNX6-206ENST00000556162 LCE3CQ5T5A8 94 aa4.73□□□□□ -1.65
SNX6-206ENST00000556162 NDUFAF8A1L188 74 aa4.72□□□□□ -1.65
SNX6-206ENST00000556162 LUZP6Q538Z0 58 aa4.58□□□□□ -1.68
SNX6-206ENST00000556162 KRTAP5-4Q6L8H1 288 aa4.52□□□□□ -1.69
SNX6-206ENST00000556162 KRTAP5-5Q701N2 237 aaPredicted RBP4.49□□□□□ -1.69
SNX6-206ENST00000556162 SPRR5A0A1B0GTR4 108 aa4.47□□□□□ -1.69
SNX6-206ENST00000556162 MT4P47944 62 aa4.47□□□□□ -1.69
SNX6-206ENST00000556162 HMCN1Q96RW7 5635 aa4.45□□□□□ -1.7
SNX6-206ENST00000556162 KRTAP9-6A8MVA2 160 aa4.43□□□□□ -1.7
SNX6-206ENST00000556162 SYNE1Q8NF91 8797 aaKnown RBP4.39□□□□□ -1.71
SNX6-206ENST00000556162 KRTAP12-4P60329 112 aa4.34□□□□□ -1.71
SNX6-206ENST00000556162 MT1AP04731 61 aa4.3□□□□□ -1.72
SNX6-206ENST00000556162 GPR98Q8WXG9 6306 aa4.29□□□□□ -1.72
SNX6-206ENST00000556162 KRTAP6-1Q3LI64 71 aa4.26□□□□□ -1.73
SNX6-206ENST00000556162 KRTAP20-2Q3LI61 65 aa4.25□□□□□ -1.73
SNX6-206ENST00000556162 AHNAK2Q8IVF2 5795 aa4.16□□□□□ -1.74
SNX6-206ENST00000556162 KRTAP6-2Q3LI66 62 aa4.01□□□□□ -1.77
SNX6-206ENST00000556162 KRTAP5-2Q701N4 177 aa4.01□□□□□ -1.77
SNX6-206ENST00000556162 KRTAP5-10Q6L8G5 202 aa3.96□□□□□ -1.78
SNX6-206ENST00000556162 MT3P25713 68 aa3.94□□□□□ -1.78
SNX6-206ENST00000556162 INE1O15225 51 aa3.93□□□□□ -1.78
SNX6-206ENST00000556162 OBSCNQ5VST9 7968 aa3.85□□□□□ -1.79
SNX6-206ENST00000556162 KRTAP5-7Q6L8G8 165 aa3.77□□□□□ -1.81
SNX6-206ENST00000556162 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
SNX6-206ENST00000556162 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
SNX6-206ENST00000556162 KRTAP5-8O75690 187 aa3.66□□□□□ -1.82
SNX6-206ENST00000556162 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.82
SNX6-206ENST00000556162 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
SNX6-206ENST00000556162 MUC5ACP98088 5654 aa3.53□□□□□ -1.84
SNX6-206ENST00000556162 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
SNX6-206ENST00000556162 LCE3DQ9BYE3 92 aa3.5□□□□□ -1.85
SNX6-206ENST00000556162 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.86
SNX6-206ENST00000556162 MUC5BQ9HC84 5762 aaPredicted RBP3.4□□□□□ -1.87
SNX6-206ENST00000556162 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.87
SNX6-206ENST00000556162 LCE1BQ5T7P3 118 aa3.31□□□□□ -1.88
SNX6-206ENST00000556162 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
SNX6-206ENST00000556162 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
SNX6-206ENST00000556162 PRM1P04553 51 aa2.86□□□□□ -1.95
SNX6-206ENST00000556162 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
SNX6-206ENST00000556162 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
SNX6-206ENST00000556162 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
SNX6-206ENST00000556162 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
SNX6-206ENST00000556162 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms