RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	KRTAP19-6	Q3LI70	58 aa		4.24	□□□□□ -1.73
TMPO-212	ENST00000556029	DST	Q03001	7570 aa	Known RBP	4.24	□□□□□ -1.73
TMPO-212	ENST00000556029	KRTAP19-7	Q3SYF9	63 aa		4.22	□□□□□ -1.73
TMPO-212	ENST00000556029	KRTAP9-6	A8MVA2	160 aa		4.21	□□□□□ -1.74
TMPO-212	ENST00000556029	MT1L	Q93083	61 aa		4.15	□□□□□ -1.75
TMPO-212	ENST00000556029	KRTAP19-4	Q3LI73	84 aa		4.14	□□□□□ -1.75
TMPO-212	ENST00000556029	MT1E	P04732	61 aa		4.13	□□□□□ -1.75
TMPO-212	ENST00000556029	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.13	□□□□□ -1.75
TMPO-212	ENST00000556029	KRTAP9-7	A8MTY7	169 aa		4.1	□□□□□ -1.75
TMPO-212	ENST00000556029	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.1	□□□□□ -1.75
TMPO-212	ENST00000556029	SPRR2E	P22531	72 aa		4.09	□□□□□ -1.76
TMPO-212	ENST00000556029	SPRR2B	P35325	72 aa		4.09	□□□□□ -1.76
TMPO-212	ENST00000556029	SPRR2A	P35326	72 aa		4.09	□□□□□ -1.76
TMPO-212	ENST00000556029	SSPO	A2VEC9	5147 aa		4.07	□□□□□ -1.76
TMPO-212	ENST00000556029	KRTAP2-3	P0C7H8	128 aa		4.07	□□□□□ -1.76
TMPO-212	ENST00000556029	KRTAP2-4	Q9BYR9	128 aa		4.07	□□□□□ -1.76
TMPO-212	ENST00000556029	KRTAP2-1	Q9BYU5	128 aa		4.07	□□□□□ -1.76
TMPO-212	ENST00000556029	KRTAP4-3	Q9BYR4	195 aa		4.04	□□□□□ -1.76
TMPO-212	ENST00000556029	MACF1	Q9UPN3	7388 aa	Known RBP	4.03	□□□□□ -1.76
TMPO-212	ENST00000556029	KRTAP19-3	Q7Z4W3	81 aa		4	□□□□□ -1.77
TMPO-212	ENST00000556029	LCE3D	Q9BYE3	92 aa		4	□□□□□ -1.77
TMPO-212	ENST00000556029	LOC100996750	A0A140TA64	210 aa		3.97	□□□□□ -1.77
TMPO-212	ENST00000556029	SYNE2	Q8WXH0	6885 aa	Known RBP	3.97	□□□□□ -1.77
TMPO-212	ENST00000556029	MUC12	Q9UKN1	5478 aa		3.95	□□□□□ -1.78
TMPO-212	ENST00000556029	MUC19	Q7Z5P9	8384 aa		3.93	□□□□□ -1.78
TMPO-212	ENST00000556029	KRTAP6-3	Q3LI67	103 aa		3.92	□□□□□ -1.78
TMPO-212	ENST00000556029	SPRR2D	P22532	72 aa		3.91	□□□□□ -1.78
TMPO-212	ENST00000556029	LCE3E	Q5T5B0	92 aa		3.91	□□□□□ -1.78
TMPO-212	ENST00000556029	MT1M	Q8N339	61 aa		3.91	□□□□□ -1.78
TMPO-212	ENST00000556029	KRTAP4-9	Q9BYQ8	210 aa		3.76	□□□□□ -1.81
TMPO-212	ENST00000556029	PRM1	P04553	51 aa		3.75	□□□□□ -1.81
TMPO-212	ENST00000556029	KRTAP20-1	Q3LI63	56 aa		3.7	□□□□□ -1.82
TMPO-212	ENST00000556029	LCE5A	Q5TCM9	118 aa		3.68	□□□□□ -1.82
TMPO-212	ENST00000556029	KRTAP5-9	P26371	169 aa		3.65	□□□□□ -1.82
TMPO-212	ENST00000556029	LCE1A	Q5T7P2	110 aa		3.65	□□□□□ -1.83
TMPO-212	ENST00000556029	MT4	P47944	62 aa		3.64	□□□□□ -1.83
TMPO-212	ENST00000556029	LCE1B	Q5T7P3	118 aa		3.61	□□□□□ -1.83
TMPO-212	ENST00000556029	LCE1D	Q5T752	114 aa		3.57	□□□□□ -1.84
TMPO-212	ENST00000556029	MDN1	Q9NU22	5596 aa		3.56	□□□□□ -1.84
TMPO-212	ENST00000556029	MT3	P25713	68 aa		3.55	□□□□□ -1.84
TMPO-212	ENST00000556029	NEB	P20929	6669 aa		3.53	□□□□□ -1.84
TMPO-212	ENST00000556029	KRTAP6-1	Q3LI64	71 aa		3.53	□□□□□ -1.84
TMPO-212	ENST00000556029	KRTAP2-2	Q9BYT5	123 aa		3.52	□□□□□ -1.85
TMPO-212	ENST00000556029	MT1A	P04731	61 aa		3.49	□□□□□ -1.85
TMPO-212	ENST00000556029	KRTAP6-2	Q3LI66	62 aa		3.33	□□□□□ -1.88
TMPO-212	ENST00000556029	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.28	□□□□□ -1.88
TMPO-212	ENST00000556029	KRTAP9-4	Q9BYQ2	154 aa		3.27	□□□□□ -1.89
TMPO-212	ENST00000556029	LCE4A	Q5TA78	99 aa		3.25	□□□□□ -1.89
TMPO-212	ENST00000556029	KRTAP4-6	Q9BYQ5	205 aa		3.11	□□□□□ -1.91
TMPO-212	ENST00000556029	GPR98	Q8WXG9	6306 aa		3.01	□□□□□ -1.93
TMPO-212	ENST00000556029	LCE1C	Q5T751	118 aa		2.96	□□□□□ -1.94
TMPO-212	ENST00000556029	LCE1E	Q5T753	118 aa		2.96	□□□□□ -1.94
TMPO-212	ENST00000556029	LCE1F	Q5T754	118 aa		2.96	□□□□□ -1.94
TMPO-212	ENST00000556029	KRTAP20-2	Q3LI61	65 aa		2.95	□□□□□ -1.94
TMPO-212	ENST00000556029	KRTAP5-4	Q6L8H1	288 aa		2.91	□□□□□ -1.94
TMPO-212	ENST00000556029	HMCN1	Q96RW7	5635 aa		2.88	□□□□□ -1.95
TMPO-212	ENST00000556029	KRTAP4-11	Q9BYQ6	195 aa		2.87	□□□□□ -1.95
TMPO-212	ENST00000556029	MUC5AC	P98088	5654 aa		2.8	□□□□□ -1.96
TMPO-212	ENST00000556029	KRTAP5-3	Q6L8H2	238 aa		2.76	□□□□□ -1.97
TMPO-212	ENST00000556029	KRTAP4-4	Q9BYR3	166 aa		2.69	□□□□□ -1.98
TMPO-212	ENST00000556029	KRTAP5-2	Q701N4	177 aa		2.67	□□□□□ -1.98
TMPO-212	ENST00000556029	KRTAP5-7	Q6L8G8	165 aa		2.67	□□□□□ -1.98
TMPO-212	ENST00000556029	AHNAK2	Q8IVF2	5795 aa		2.64	□□□□□ -1.99
TMPO-212	ENST00000556029	KRTAP9-9	Q9BYP9	154 aa		2.62	□□□□□ -1.99
TMPO-212	ENST00000556029	KRTAP4-12	Q9BQ66	201 aa		2.58	□□□□□ -2
TMPO-212	ENST00000556029	KRTAP4-2	Q9BYR5	136 aa		2.58	□□□□□ -2
TMPO-212	ENST00000556029	KRTAP5-10	Q6L8G5	202 aa		2.57	□□□□□ -2
TMPO-212	ENST00000556029	AHNAK	Q09666	5890 aa	Known RBP	2.49	□□□□□ -2.01
TMPO-212	ENST00000556029	KRTAP5-8	O75690	187 aa		2.46	□□□□□ -2.02
TMPO-212	ENST00000556029	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.45	□□□□□ -2.02
TMPO-212	ENST00000556029	KRTAP5-1	Q6L8H4	278 aa		2.34	□□□□□ -2.04
TMPO-212	ENST00000556029	KRTAP21-2	Q3LI59	83 aa		2.21	□□□□□ -2.06
TMPO-212	ENST00000556029	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.16	□□□□□ -2.06
TMPO-212	ENST00000556029	KRTAP5-11	Q6L8G4	156 aa		2.01	□□□□□ -2.09
TMPO-212	ENST00000556029	KRTAP21-1	Q3LI58	79 aa		1.99	□□□□□ -2.09
TMPO-212	ENST00000556029	PHGR1	C9JFL3	82 aa		1.78	□□□□□ -2.12
TMPO-212	ENST00000556029	MUC16	Q8WXI7	14507 aa		1.15	□□□□□ -2.23

Retrieved 77 of 20,778 RNA–protein pairs in 5.9 ms