RNA–Protein interactions for RNA: ENST00000555839.5

APEX1-211, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-211ENST00000555839 LCE3AQ5TA76 89 aa4.8□□□□□ -1.64
APEX1-211ENST00000555839 K7ERS5 55 aa4.79□□□□□ -1.64
APEX1-211ENST00000555839 MT1GP13640 62 aa4.78□□□□□ -1.64
APEX1-211ENST00000555839 PP632Q6XCG6 107 aa4.76□□□□□ -1.65
APEX1-211ENST00000555839 DSTQ03001 7570 aaKnown RBP4.75□□□□□ -1.65
APEX1-211ENST00000555839 MT1LQ93083 61 aa4.71□□□□□ -1.66
APEX1-211ENST00000555839 KRTAP25-1Q3LHN0 102 aa4.69□□□□□ -1.66
APEX1-211ENST00000555839 RPS28P62857 69 aaKnown RBP4.67□□□□□ -1.66
APEX1-211ENST00000555839 MT1MQ8N339 61 aa4.67□□□□□ -1.66
APEX1-211ENST00000555839 A6NED7 52 aa4.66□□□□□ -1.66
APEX1-211ENST00000555839 KRTAP12-3P60328 96 aa4.64□□□□□ -1.67
APEX1-211ENST00000555839 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
APEX1-211ENST00000555839 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
APEX1-211ENST00000555839 KRTAP23-1A1A580 65 aa4.52□□□□□ -1.69
APEX1-211ENST00000555839 CDC42SE1Q9NRR8 79 aa4.51□□□□□ -1.69
APEX1-211ENST00000555839 LCE4AQ5TA78 99 aa4.48□□□□□ -1.69
APEX1-211ENST00000555839 KRTAP4-7Q9BYR0 210 aa4.47□□□□□ -1.69
APEX1-211ENST00000555839 LCE1DQ5T752 114 aa4.46□□□□□ -1.7
APEX1-211ENST00000555839 HMCN1Q96RW7 5635 aa4.45□□□□□ -1.7
APEX1-211ENST00000555839 ROMO1P60602 79 aa4.44□□□□□ -1.7
APEX1-211ENST00000555839 KRTAP19-4Q3LI73 84 aa4.44□□□□□ -1.7
APEX1-211ENST00000555839 AHNAK2Q8IVF2 5795 aa4.42□□□□□ -1.7
APEX1-211ENST00000555839 KRTAP5-10Q6L8G5 202 aa4.41□□□□□ -1.7
APEX1-211ENST00000555839 MT4P47944 62 aa4.4□□□□□ -1.71
APEX1-211ENST00000555839 KRTAP15-1Q3LI76 137 aa4.39□□□□□ -1.71
APEX1-211ENST00000555839 KRTAP5-4Q6L8H1 288 aa4.39□□□□□ -1.71
APEX1-211ENST00000555839 KRTAP5-7Q6L8G8 165 aa4.33□□□□□ -1.72
APEX1-211ENST00000555839 LCE3CQ5T5A8 94 aa4.29□□□□□ -1.72
APEX1-211ENST00000555839 KRTAP4-6Q9BYQ5 205 aa4.27□□□□□ -1.73
APEX1-211ENST00000555839 KRTAP5-5Q701N2 237 aaPredicted RBP4.26□□□□□ -1.73
APEX1-211ENST00000555839 LOC100996750A0A140TA64 210 aa4.23□□□□□ -1.73
APEX1-211ENST00000555839 PRO0628Q9UI54 55 aa4.2□□□□□ -1.74
APEX1-211ENST00000555839 KRTAP5-3Q6L8H2 238 aa4.19□□□□□ -1.74
APEX1-211ENST00000555839 KRTAP12-4P60329 112 aa4.18□□□□□ -1.74
APEX1-211ENST00000555839 SPRR5A0A1B0GTR4 108 aa4.15□□□□□ -1.75
APEX1-211ENST00000555839 KRTAP20-2Q3LI61 65 aa4.14□□□□□ -1.75
APEX1-211ENST00000555839 BRK1Q8WUW1 75 aa4.12□□□□□ -1.75
APEX1-211ENST00000555839 SYNE1Q8NF91 8797 aaKnown RBP4.04□□□□□ -1.76
APEX1-211ENST00000555839 MT1AP04731 61 aa4.02□□□□□ -1.77
APEX1-211ENST00000555839 KRTAP9-6A8MVA2 160 aa4□□□□□ -1.77
APEX1-211ENST00000555839 PMAIP1Q13794 54 aa3.97□□□□□ -1.77
APEX1-211ENST00000555839 KRTAP6-1Q3LI64 71 aa3.97□□□□□ -1.77
APEX1-211ENST00000555839 H3BS24 57 aa3.94□□□□□ -1.78
APEX1-211ENST00000555839 KRTAP9-4Q9BYQ2 154 aa3.89□□□□□ -1.79
APEX1-211ENST00000555839 A0A0A0MQY5 61 aa3.86□□□□□ -1.79
APEX1-211ENST00000555839 KRTAP5-2Q701N4 177 aa3.86□□□□□ -1.79
APEX1-211ENST00000555839 KTN1-AS1Q86SY8 53 aa3.8□□□□□ -1.8
APEX1-211ENST00000555839 KRTAP6-2Q3LI66 62 aa3.79□□□□□ -1.8
APEX1-211ENST00000555839 AHNAKQ09666 5890 aaKnown RBP3.77□□□□□ -1.81
APEX1-211ENST00000555839 KRTAP4-11Q9BYQ6 195 aa3.77□□□□□ -1.81
APEX1-211ENST00000555839 MUC5ACP98088 5654 aa3.75□□□□□ -1.81
APEX1-211ENST00000555839 MUC5BQ9HC84 5762 aaPredicted RBP3.75□□□□□ -1.81
APEX1-211ENST00000555839 MT3P25713 68 aa3.7□□□□□ -1.82
APEX1-211ENST00000555839 KRTAP5-8O75690 187 aa3.66□□□□□ -1.82
APEX1-211ENST00000555839 PRAC1Q96KF2 57 aa3.66□□□□□ -1.82
APEX1-211ENST00000555839 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
APEX1-211ENST00000555839 KRTAP9-9Q9BYP9 154 aa3.56□□□□□ -1.84
APEX1-211ENST00000555839 KRTAP5-1Q6L8H4 278 aa3.44□□□□□ -1.86
APEX1-211ENST00000555839 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
APEX1-211ENST00000555839 LUZP6Q538Z0 58 aa3.24□□□□□ -1.89
APEX1-211ENST00000555839 KRTAP4-12Q9BQ66 201 aa3.21□□□□□ -1.9
APEX1-211ENST00000555839 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
APEX1-211ENST00000555839 LCE3DQ9BYE3 92 aa3.13□□□□□ -1.91
APEX1-211ENST00000555839 KRTAP4-2Q9BYR5 136 aa3.13□□□□□ -1.91
APEX1-211ENST00000555839 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
APEX1-211ENST00000555839 NDUFAF8A1L188 74 aa3.01□□□□□ -1.93
APEX1-211ENST00000555839 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
APEX1-211ENST00000555839 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.84□□□□□ -1.95
APEX1-211ENST00000555839 KRTAP5-11Q6L8G4 156 aa2.8□□□□□ -1.96
APEX1-211ENST00000555839 INE1O15225 51 aa2.73□□□□□ -1.97
APEX1-211ENST00000555839 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
APEX1-211ENST00000555839 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
APEX1-211ENST00000555839 PHGR1C9JFL3 82 aa2.59□□□□□ -1.99
APEX1-211ENST00000555839 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
APEX1-211ENST00000555839 PRM1P04553 51 aa2.26□□□□□ -2.05
APEX1-211ENST00000555839 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
APEX1-211ENST00000555839 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
APEX1-211ENST00000555839 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 90 ms