RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 TP53AIP1Q9HCN2 124 aa1.37□□□□□ -2.19
SRP54-209ENST00000555746 MDN1Q9NU22 5596 aa1.36□□□□□ -2.19
SRP54-209ENST00000555746 PRO0255Q9UI72 69 aa1.36□□□□□ -2.19
SRP54-209ENST00000555746 K7EQZ3 153 aa1.35□□□□□ -2.19
SRP54-209ENST00000555746 POLR2KP53803 58 aaKnown RBP1.35□□□□□ -2.19
SRP54-209ENST00000555746 RPL37P61927 97 aaKnown RBP1.35□□□□□ -2.19
SRP54-209ENST00000555746 KRTAP19-2Q3LHN2 52 aa1.35□□□□□ -2.19
SRP54-209ENST00000555746 COX6B2Q6YFQ2 88 aa1.35□□□□□ -2.19
SRP54-209ENST00000555746 C6orf48Q9UBA6 75 aa1.35□□□□□ -2.19
SRP54-209ENST00000555746 H3BNG1 76 aa1.34□□□□□ -2.19
SRP54-209ENST00000555746 UNQ6190/PRO20217Q6UXQ8 127 aa1.34□□□□□ -2.19
SRP54-209ENST00000555746 MRPL34Q9BQ48 92 aaKnown RBP1.34□□□□□ -2.19
SRP54-209ENST00000555746 A8MTW9 85 aa1.33□□□□□ -2.2
SRP54-209ENST00000555746 RPL39P62891 51 aaKnown RBP1.33□□□□□ -2.2
SRP54-209ENST00000555746 CLPSL2Q6UWE3 100 aa1.33□□□□□ -2.2
SRP54-209ENST00000555746 KRTAP4-1Q9BYQ7 146 aa1.33□□□□□ -2.2
SRP54-209ENST00000555746 M0R2T5 61 aa1.32□□□□□ -2.2
SRP54-209ENST00000555746 PCOTHQ58A44 107 aa1.32□□□□□ -2.2
SRP54-209ENST00000555746 LINC01556Q5JQF7 62 aa1.32□□□□□ -2.2
SRP54-209ENST00000555746 RPL39LQ96EH5 51 aaKnown RBP1.32□□□□□ -2.2
SRP54-209ENST00000555746 WFDC13Q8IUB5 93 aa1.31□□□□□ -2.2
SRP54-209ENST00000555746 IGLV5-48A0A075B6I7 105 aa1.3□□□□□ -2.2
SRP54-209ENST00000555746 H0YAA0 97 aa1.3□□□□□ -2.2
SRP54-209ENST00000555746 COX6A2Q02221 97 aa1.29□□□□□ -2.2
SRP54-209ENST00000555746 SPINK6Q6UWN8 80 aa1.28□□□□□ -2.2
SRP54-209ENST00000555746 FLGP20930 4061 aaPredicted RBP1.27□□□□□ -2.21
SRP54-209ENST00000555746 SPRR2EP22531 72 aa1.27□□□□□ -2.21
SRP54-209ENST00000555746 SPRR2BP35325 72 aa1.27□□□□□ -2.21
SRP54-209ENST00000555746 SPRR2AP35326 72 aa1.27□□□□□ -2.21
SRP54-209ENST00000555746 KRTAP12-1P59990 96 aa1.27□□□□□ -2.21
SRP54-209ENST00000555746 AHNAKQ09666 5890 aaKnown RBP1.27□□□□□ -2.21
SRP54-209ENST00000555746 KRTAP13-4Q3LI77 160 aa1.26□□□□□ -2.21
SRP54-209ENST00000555746 H1FX-AS1Q4G0G2 97 aa1.26□□□□□ -2.21
SRP54-209ENST00000555746 A0A096LNI7 61 aa1.25□□□□□ -2.21
SRP54-209ENST00000555746 C10orf95Q9H7T3 257 aa1.25□□□□□ -2.21
SRP54-209ENST00000555746 M0QY20 66 aa1.24□□□□□ -2.21
SRP54-209ENST00000555746 MMP24-AS1A0A0U1RRL7 71 aa1.23□□□□□ -2.21
SRP54-209ENST00000555746 SPRR2DP22532 72 aa1.23□□□□□ -2.21
SRP54-209ENST00000555746 TOMM7Q9P0U1 55 aa1.23□□□□□ -2.21
SRP54-209ENST00000555746 KRTAP21-2Q3LI59 83 aa1.21□□□□□ -2.22
SRP54-209ENST00000555746 DEFB105AQ8NG35 78 aa1.21□□□□□ -2.22
SRP54-209ENST00000555746 SPRR1AP35321 89 aa1.2□□□□□ -2.22
SRP54-209ENST00000555746 MT2AP02795 61 aa1.19□□□□□ -2.22
SRP54-209ENST00000555746 MUC5BQ9HC84 5762 aaPredicted RBP1.19□□□□□ -2.22
SRP54-209ENST00000555746 PRLHP81277 87 aa1.18□□□□□ -2.22
SRP54-209ENST00000555746 SPRR2FQ96RM1 72 aa1.18□□□□□ -2.22
SRP54-209ENST00000555746 MT1FP04733 61 aa1.17□□□□□ -2.22
SRP54-209ENST00000555746 MUC5ACP98088 5654 aa1.17□□□□□ -2.22
SRP54-209ENST00000555746 C9orf92A6NGG3 77 aa1.16□□□□□ -2.22
SRP54-209ENST00000555746 SPRR1BP22528 89 aa1.15□□□□□ -2.23
SRP54-209ENST00000555746 S4R3F8 94 aa1.14□□□□□ -2.23
SRP54-209ENST00000555746 SPINK1P00995 79 aa1.13□□□□□ -2.23
SRP54-209ENST00000555746 MT4P47944 62 aa1.11□□□□□ -2.23
SRP54-209ENST00000555746 A0A0D9SG42 100 aa1.06□□□□□ -2.24
SRP54-209ENST00000555746 RPS29P62273 56 aaKnown RBP1.05□□□□□ -2.24
SRP54-209ENST00000555746 KRTAP8-1Q8IUC2 63 aa1.02□□□□□ -2.25
SRP54-209ENST00000555746 M0QZ58 72 aa1.01□□□□□ -2.25
SRP54-209ENST00000555746 MT1BP07438 61 aa0.96□□□□□ -2.26
SRP54-209ENST00000555746 KRTAP20-2Q3LI61 65 aa0.95□□□□□ -2.26
SRP54-209ENST00000555746 TNP1P09430 55 aa0.92□□□□□ -2.26
SRP54-209ENST00000555746 KRTAP19-8Q3LI54 63 aa0.9□□□□□ -2.27
SRP54-209ENST00000555746 SYNE1Q8NF91 8797 aaKnown RBP0.89□□□□□ -2.27
SRP54-209ENST00000555746 SPRR2GQ9BYE4 73 aa0.85□□□□□ -2.27
SRP54-209ENST00000555746 KRTAP19-3Q7Z4W3 81 aa0.82□□□□□ -2.28
SRP54-209ENST00000555746 PHGR1C9JFL3 82 aa0.81□□□□□ -2.28
SRP54-209ENST00000555746 MT1XP80297 61 aa0.81□□□□□ -2.28
SRP54-209ENST00000555746 MT1GP13640 62 aa0.77□□□□□ -2.29
SRP54-209ENST00000555746 PRM1P04553 51 aa0.75□□□□□ -2.29
SRP54-209ENST00000555746 KRTAP19-5Q3LI72 72 aa0.74□□□□□ -2.29
SRP54-209ENST00000555746 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
SRP54-209ENST00000555746 MT1EP04732 61 aa0.73□□□□□ -2.29
SRP54-209ENST00000555746 MT1MQ8N339 61 aa0.72□□□□□ -2.29
SRP54-209ENST00000555746 KRTAP19-7Q3SYF9 63 aa0.71□□□□□ -2.3
SRP54-209ENST00000555746 MT1LQ93083 61 aa0.69□□□□□ -2.3
SRP54-209ENST00000555746 KRTAP21-1Q3LI58 79 aa0.64□□□□□ -2.31
SRP54-209ENST00000555746 MT1AP04731 61 aa0.63□□□□□ -2.31
SRP54-209ENST00000555746 KRTAP6-1Q3LI64 71 aa0.6□□□□□ -2.31
SRP54-209ENST00000555746 KRTAP6-2Q3LI66 62 aa0.6□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 127.5 ms