RNA–Protein interactions for RNA: ENST00000555619.5

NPC2-207, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NPC2, Length 1,035 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-207ENST00000555619 MDN1Q9NU22 5596 aa9.35□□□□□ -0.91
NPC2-207ENST00000555619 NEBP20929 6669 aa9.32□□□□□ -0.92
NPC2-207ENST00000555619 KTN1-AS1Q86SY8 53 aa9.25□□□□□ -0.93
NPC2-207ENST00000555619 KRTAP19-3Q7Z4W3 81 aa9.24□□□□□ -0.93
NPC2-207ENST00000555619 MT1LQ93083 61 aa9.24□□□□□ -0.93
NPC2-207ENST00000555619 LOC100996750A0A140TA64 210 aa9.21□□□□□ -0.94
NPC2-207ENST00000555619 KRTAP4-6Q9BYQ5 205 aa9.21□□□□□ -0.94
NPC2-207ENST00000555619 KRTAP15-1Q3LI76 137 aa9.15□□□□□ -0.94
NPC2-207ENST00000555619 LCE5AQ5TCM9 118 aa9.13□□□□□ -0.95
NPC2-207ENST00000555619 MT1GP13640 62 aa9.11□□□□□ -0.95
NPC2-207ENST00000555619 SPRR2DP22532 72 aa9.04□□□□□ -0.96
NPC2-207ENST00000555619 MT1MQ8N339 61 aa8.99□□□□□ -0.97
NPC2-207ENST00000555619 KRTAP4-7Q9BYR0 210 aa8.91□□□□□ -0.98
NPC2-207ENST00000555619 KRTAP19-4Q3LI73 84 aa8.88□□□□□ -0.99
NPC2-207ENST00000555619 KRTAP4-3Q9BYR4 195 aa8.83□□□□□ -1
NPC2-207ENST00000555619 LCE3CQ5T5A8 94 aa8.82□□□□□ -1
NPC2-207ENST00000555619 SVIPQ8NHG7 77 aa8.8□□□□□ -1
NPC2-207ENST00000555619 KRTAP2-3P0C7H8 128 aa8.74□□□□□ -1.01
NPC2-207ENST00000555619 KRTAP20-1Q3LI63 56 aa8.74□□□□□ -1.01
NPC2-207ENST00000555619 KRTAP2-4Q9BYR9 128 aa8.74□□□□□ -1.01
NPC2-207ENST00000555619 LCE3BQ5TA77 95 aa8.72□□□□□ -1.01
NPC2-207ENST00000555619 H3BS24 57 aa8.67□□□□□ -1.02
NPC2-207ENST00000555619 DSTQ03001 7570 aaKnown RBP8.58□□□□□ -1.04
NPC2-207ENST00000555619 KRTAP2-2Q9BYT5 123 aa8.52□□□□□ -1.05
NPC2-207ENST00000555619 KRTAP2-1Q9BYU5 128 aa8.52□□□□□ -1.05
NPC2-207ENST00000555619 KRTAP4-12Q9BQ66 201 aa8.39□□□□□ -1.07
NPC2-207ENST00000555619 KRTAP9-6A8MVA2 160 aa8.33□□□□□ -1.08
NPC2-207ENST00000555619 SPRR5A0A1B0GTR4 108 aa8.21□□□□□ -1.1
NPC2-207ENST00000555619 KRTAP5-5Q701N2 237 aaPredicted RBP8.14□□□□□ -1.11
NPC2-207ENST00000555619 KRTAP5-4Q6L8H1 288 aa8.03□□□□□ -1.12
NPC2-207ENST00000555619 KRTAP9-9Q9BYP9 154 aa8.03□□□□□ -1.12
NPC2-207ENST00000555619 KRTAP9-4Q9BYQ2 154 aa8.03□□□□□ -1.12
NPC2-207ENST00000555619 LCE4AQ5TA78 99 aa8.01□□□□□ -1.13
NPC2-207ENST00000555619 KRTAP4-9Q9BYQ8 210 aa7.94□□□□□ -1.14
NPC2-207ENST00000555619 MT4P47944 62 aa7.87□□□□□ -1.15
NPC2-207ENST00000555619 MT1AP04731 61 aa7.86□□□□□ -1.15
NPC2-207ENST00000555619 LCE1DQ5T752 114 aa7.81□□□□□ -1.16
NPC2-207ENST00000555619 KRTAP6-1Q3LI64 71 aa7.8□□□□□ -1.16
NPC2-207ENST00000555619 KRTAP12-4P60329 112 aa7.72□□□□□ -1.17
NPC2-207ENST00000555619 SYNE1Q8NF91 8797 aaKnown RBP7.68□□□□□ -1.18
NPC2-207ENST00000555619 LUZP6Q538Z0 58 aa7.68□□□□□ -1.18
NPC2-207ENST00000555619 HMCN1Q96RW7 5635 aa7.64□□□□□ -1.19
NPC2-207ENST00000555619 KRTAP20-2Q3LI61 65 aa7.54□□□□□ -1.2
NPC2-207ENST00000555619 KRTAP6-2Q3LI66 62 aa7.28□□□□□ -1.24
NPC2-207ENST00000555619 KRTAP5-3Q6L8H2 238 aa7.28□□□□□ -1.24
NPC2-207ENST00000555619 KRTAP4-11Q9BYQ6 195 aa7.22□□□□□ -1.25
NPC2-207ENST00000555619 KRTAP4-2Q9BYR5 136 aa7.2□□□□□ -1.26
NPC2-207ENST00000555619 KRTAP5-2Q701N4 177 aa7.18□□□□□ -1.26
NPC2-207ENST00000555619 MT3P25713 68 aa7.15□□□□□ -1.26
NPC2-207ENST00000555619 NDUFAF8A1L188 74 aa7.12□□□□□ -1.27
NPC2-207ENST00000555619 AHNAK2Q8IVF2 5795 aa7.09□□□□□ -1.27
NPC2-207ENST00000555619 GPR98Q8WXG9 6306 aa6.91□□□□□ -1.3
NPC2-207ENST00000555619 KRTAP5-10Q6L8G5 202 aa6.78□□□□□ -1.32
NPC2-207ENST00000555619 OBSCNQ5VST9 7968 aa6.54□□□□□ -1.36
NPC2-207ENST00000555619 LCE3DQ9BYE3 92 aa6.53□□□□□ -1.36
NPC2-207ENST00000555619 KRTAP5-8O75690 187 aa6.42□□□□□ -1.38
NPC2-207ENST00000555619 KRTAP5-7Q6L8G8 165 aa6.38□□□□□ -1.39
NPC2-207ENST00000555619 LCE1EQ5T753 118 aa6.32□□□□□ -1.4
NPC2-207ENST00000555619 KRTAP5-1Q6L8H4 278 aa6.3□□□□□ -1.4
NPC2-207ENST00000555619 LCE3EQ5T5B0 92 aa6.29□□□□□ -1.4
NPC2-207ENST00000555619 MUC5ACP98088 5654 aa6.12□□□□□ -1.43
NPC2-207ENST00000555619 A0A0A0MQY5 61 aa6.07□□□□□ -1.44
NPC2-207ENST00000555619 LCE1BQ5T7P3 118 aa5.98□□□□□ -1.45
NPC2-207ENST00000555619 LCE1CQ5T751 118 aa5.87□□□□□ -1.47
NPC2-207ENST00000555619 INE1O15225 51 aa5.81□□□□□ -1.48
NPC2-207ENST00000555619 MUC5BQ9HC84 5762 aaPredicted RBP5.68□□□□□ -1.5
NPC2-207ENST00000555619 AHNAKQ09666 5890 aaKnown RBP5.64□□□□□ -1.51
NPC2-207ENST00000555619 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.42□□□□□ -1.54
NPC2-207ENST00000555619 PRM1P04553 51 aa5.24□□□□□ -1.57
NPC2-207ENST00000555619 KRTAP5-11Q6L8G4 156 aa5.22□□□□□ -1.57
NPC2-207ENST00000555619 KRTAP21-2Q3LI59 83 aa5.11□□□□□ -1.59
NPC2-207ENST00000555619 LCE1FQ5T754 118 aa4.85□□□□□ -1.63
NPC2-207ENST00000555619 KRTAP4-4Q9BYR3 166 aa4.63□□□□□ -1.67
NPC2-207ENST00000555619 PHGR1C9JFL3 82 aa4.5□□□□□ -1.69
NPC2-207ENST00000555619 MUC19Q7Z5P9 8384 aa3.95□□□□□ -1.78
NPC2-207ENST00000555619 KRTAP21-1Q3LI58 79 aa3.08□□□□□ -1.92
NPC2-207ENST00000555619 MUC16Q8WXI7 14507 aa2.86□□□□□ -1.95
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms