RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 KRTAP4-7Q9BYR0 210 aa8.21□□□□□ -1.1
STRN3-207ENST00000555358 MT1LQ93083 61 aa8.2□□□□□ -1.1
STRN3-207ENST00000555358 MUC12Q9UKN1 5478 aa8.18□□□□□ -1.1
STRN3-207ENST00000555358 KRTAP2-3P0C7H8 128 aa8.14□□□□□ -1.11
STRN3-207ENST00000555358 KRTAP2-4Q9BYR9 128 aa8.14□□□□□ -1.11
STRN3-207ENST00000555358 KRTAP2-1Q9BYU5 128 aa8.14□□□□□ -1.11
STRN3-207ENST00000555358 KRTAP19-4Q3LI73 84 aa8.11□□□□□ -1.11
STRN3-207ENST00000555358 SYNE2Q8WXH0 6885 aaKnown RBP8.09□□□□□ -1.11
STRN3-207ENST00000555358 SPRR2FQ96RM1 72 aa8.09□□□□□ -1.12
STRN3-207ENST00000555358 KRTAP19-3Q7Z4W3 81 aa7.96□□□□□ -1.14
STRN3-207ENST00000555358 KRTAP9-6A0A140TA67 174 aa7.95□□□□□ -1.14
STRN3-207ENST00000555358 MT1GP13640 62 aa7.87□□□□□ -1.15
STRN3-207ENST00000555358 KRTAP5-9P26371 169 aa7.87□□□□□ -1.15
STRN3-207ENST00000555358 MT1MQ8N339 61 aa7.84□□□□□ -1.15
STRN3-207ENST00000555358 KRTAP4-3Q9BYR4 195 aa7.83□□□□□ -1.16
STRN3-207ENST00000555358 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.82□□□□□ -1.16
STRN3-207ENST00000555358 LCE5AQ5TCM9 118 aa7.81□□□□□ -1.16
STRN3-207ENST00000555358 MDN1Q9NU22 5596 aa7.79□□□□□ -1.16
STRN3-207ENST00000555358 LCE1AQ5T7P2 110 aa7.7□□□□□ -1.18
STRN3-207ENST00000555358 LOC100996750A0A140TA64 210 aa7.64□□□□□ -1.19
STRN3-207ENST00000555358 KRTAP6-3Q3LI67 103 aa7.63□□□□□ -1.19
STRN3-207ENST00000555358 DSTQ03001 7570 aaKnown RBP7.61□□□□□ -1.19
STRN3-207ENST00000555358 SPRR2EP22531 72 aa7.6□□□□□ -1.19
STRN3-207ENST00000555358 SPRR2BP35325 72 aa7.6□□□□□ -1.19
STRN3-207ENST00000555358 SPRR2AP35326 72 aa7.6□□□□□ -1.19
STRN3-207ENST00000555358 KRTAP9-7A8MTY7 169 aa7.32□□□□□ -1.24
STRN3-207ENST00000555358 SPRR2DP22532 72 aa7.31□□□□□ -1.24
STRN3-207ENST00000555358 KRTAP12-4P60329 112 aa7.17□□□□□ -1.26
STRN3-207ENST00000555358 NEBP20929 6669 aa7.14□□□□□ -1.27
STRN3-207ENST00000555358 KRTAP5-5Q701N2 237 aaPredicted RBP7.04□□□□□ -1.28
STRN3-207ENST00000555358 LCE3BQ5TA77 95 aa7.01□□□□□ -1.29
STRN3-207ENST00000555358 KRTAP6-1Q3LI64 71 aa6.95□□□□□ -1.3
STRN3-207ENST00000555358 MT1AP04731 61 aa6.92□□□□□ -1.3
STRN3-207ENST00000555358 KRTAP4-9Q9BYQ8 210 aa6.91□□□□□ -1.3
STRN3-207ENST00000555358 SYNE1Q8NF91 8797 aaKnown RBP6.82□□□□□ -1.32
STRN3-207ENST00000555358 LCE3DQ9BYE3 92 aa6.66□□□□□ -1.34
STRN3-207ENST00000555358 KRTAP5-4Q6L8H1 288 aa6.61□□□□□ -1.35
STRN3-207ENST00000555358 LCE3EQ5T5B0 92 aa6.59□□□□□ -1.35
STRN3-207ENST00000555358 KRTAP9-4Q9BYQ2 154 aa6.57□□□□□ -1.36
STRN3-207ENST00000555358 KRTAP2-2Q9BYT5 123 aa6.5□□□□□ -1.37
STRN3-207ENST00000555358 KRTAP20-1Q3LI63 56 aa6.48□□□□□ -1.37
STRN3-207ENST00000555358 MT4P47944 62 aa6.41□□□□□ -1.38
STRN3-207ENST00000555358 LCE4AQ5TA78 99 aa6.4□□□□□ -1.38
STRN3-207ENST00000555358 KRTAP4-6Q9BYQ5 205 aa6.4□□□□□ -1.38
STRN3-207ENST00000555358 PRM1P04553 51 aa6.37□□□□□ -1.39
STRN3-207ENST00000555358 KRTAP6-2Q3LI66 62 aa6.37□□□□□ -1.39
STRN3-207ENST00000555358 MT3P25713 68 aa6.24□□□□□ -1.41
STRN3-207ENST00000555358 LCE1DQ5T752 114 aa6.24□□□□□ -1.41
STRN3-207ENST00000555358 HMCN1Q96RW7 5635 aa6.22□□□□□ -1.41
STRN3-207ENST00000555358 KRTAP20-2Q3LI61 65 aa6.21□□□□□ -1.42
STRN3-207ENST00000555358 OBSCNQ5VST9 7968 aa6.04□□□□□ -1.44
STRN3-207ENST00000555358 KRTAP5-2Q701N4 177 aa6.03□□□□□ -1.44
STRN3-207ENST00000555358 KRTAP5-3Q6L8H2 238 aa5.97□□□□□ -1.45
STRN3-207ENST00000555358 AHNAK2Q8IVF2 5795 aa5.4□□□□□ -1.55
STRN3-207ENST00000555358 LCE1EQ5T753 118 aa5.34□□□□□ -1.55
STRN3-207ENST00000555358 KRTAP4-11Q9BYQ6 195 aa5.34□□□□□ -1.55
STRN3-207ENST00000555358 KRTAP5-1Q6L8H4 278 aa5.23□□□□□ -1.57
STRN3-207ENST00000555358 MUC5ACP98088 5654 aa5.2□□□□□ -1.58
STRN3-207ENST00000555358 KRTAP5-8O75690 187 aa5.15□□□□□ -1.58
STRN3-207ENST00000555358 LCE1BQ5T7P3 118 aa5.15□□□□□ -1.58
STRN3-207ENST00000555358 KRTAP5-10Q6L8G5 202 aa5.09□□□□□ -1.59
STRN3-207ENST00000555358 KRTAP4-2Q9BYR5 136 aa5.07□□□□□ -1.6
STRN3-207ENST00000555358 LCE1CQ5T751 118 aa5.01□□□□□ -1.61
STRN3-207ENST00000555358 KRTAP5-7Q6L8G8 165 aa4.94□□□□□ -1.62
STRN3-207ENST00000555358 GPR98Q8WXG9 6306 aa4.69□□□□□ -1.66
STRN3-207ENST00000555358 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.68□□□□□ -1.66
STRN3-207ENST00000555358 KRTAP9-9Q9BYP9 154 aa4.55□□□□□ -1.68
STRN3-207ENST00000555358 KRTAP21-2Q3LI59 83 aa4.53□□□□□ -1.68
STRN3-207ENST00000555358 MUC5BQ9HC84 5762 aaPredicted RBP4.51□□□□□ -1.69
STRN3-207ENST00000555358 KRTAP5-11Q6L8G4 156 aa4.4□□□□□ -1.7
STRN3-207ENST00000555358 KRTAP4-12Q9BQ66 201 aa4.26□□□□□ -1.73
STRN3-207ENST00000555358 KRTAP4-4Q9BYR3 166 aa4.12□□□□□ -1.75
STRN3-207ENST00000555358 KRTAP21-1Q3LI58 79 aa4.06□□□□□ -1.76
STRN3-207ENST00000555358 AHNAKQ09666 5890 aaKnown RBP3.94□□□□□ -1.78
STRN3-207ENST00000555358 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
STRN3-207ENST00000555358 PHGR1C9JFL3 82 aa3.8□□□□□ -1.8
STRN3-207ENST00000555358 MUC19Q7Z5P9 8384 aa3.8□□□□□ -1.8
STRN3-207ENST00000555358 MUC16Q8WXI7 14507 aa2.51□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms