RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 KRTAP2-3P0C7H8 128 aa7.65□□□□□ -1.18
FOXN3-209ENST00000555353 KRTAP2-4Q9BYR9 128 aa7.65□□□□□ -1.18
FOXN3-209ENST00000555353 PP632Q6XCG6 107 aa7.62□□□□□ -1.19
FOXN3-209ENST00000555353 MT1EP04732 61 aa7.59□□□□□ -1.19
FOXN3-209ENST00000555353 KRTAP19-5Q3LI72 72 aa7.57□□□□□ -1.2
FOXN3-209ENST00000555353 KRTAP19-3Q7Z4W3 81 aa7.48□□□□□ -1.21
FOXN3-209ENST00000555353 LCE5AQ5TCM9 118 aa7.45□□□□□ -1.22
FOXN3-209ENST00000555353 KTN1-AS1Q86SY8 53 aa7.45□□□□□ -1.22
FOXN3-209ENST00000555353 KRTAP12-3P60328 96 aa7.44□□□□□ -1.22
FOXN3-209ENST00000555353 LCE3BQ5TA77 95 aa7.42□□□□□ -1.22
FOXN3-209ENST00000555353 KRTAP2-2Q9BYT5 123 aa7.42□□□□□ -1.22
FOXN3-209ENST00000555353 KRTAP2-1Q9BYU5 128 aa7.42□□□□□ -1.22
FOXN3-209ENST00000555353 PRAC1Q96KF2 57 aa7.37□□□□□ -1.23
FOXN3-209ENST00000555353 MT1GP13640 62 aa7.35□□□□□ -1.23
FOXN3-209ENST00000555353 MT1LQ93083 61 aa7.31□□□□□ -1.24
FOXN3-209ENST00000555353 MT1MQ8N339 61 aa7.21□□□□□ -1.25
FOXN3-209ENST00000555353 KRTAP15-1Q3LI76 137 aa7.2□□□□□ -1.26
FOXN3-209ENST00000555353 DSTQ03001 7570 aaKnown RBP7.19□□□□□ -1.26
FOXN3-209ENST00000555353 KRTAP19-4Q3LI73 84 aa7.11□□□□□ -1.27
FOXN3-209ENST00000555353 KRTAP4-3Q9BYR4 195 aa7.03□□□□□ -1.28
FOXN3-209ENST00000555353 KRTAP4-7Q9BYR0 210 aa6.96□□□□□ -1.29
FOXN3-209ENST00000555353 LCE3CQ5T5A8 94 aa6.91□□□□□ -1.3
FOXN3-209ENST00000555353 KRTAP4-9Q9BYQ8 210 aa6.82□□□□□ -1.32
FOXN3-209ENST00000555353 LCE4AQ5TA78 99 aa6.78□□□□□ -1.32
FOXN3-209ENST00000555353 LCE1DQ5T752 114 aa6.69□□□□□ -1.34
FOXN3-209ENST00000555353 KRTAP5-4Q6L8H1 288 aa6.69□□□□□ -1.34
FOXN3-209ENST00000555353 MT4P47944 62 aa6.67□□□□□ -1.34
FOXN3-209ENST00000555353 LOC100996750A0A140TA64 210 aa6.58□□□□□ -1.36
FOXN3-209ENST00000555353 KRTAP5-5Q701N2 237 aaPredicted RBP6.57□□□□□ -1.36
FOXN3-209ENST00000555353 HMCN1Q96RW7 5635 aa6.54□□□□□ -1.36
FOXN3-209ENST00000555353 SPRR5A0A1B0GTR4 108 aa6.49□□□□□ -1.37
FOXN3-209ENST00000555353 KRTAP4-6Q9BYQ5 205 aa6.49□□□□□ -1.37
FOXN3-209ENST00000555353 KRTAP9-6A8MVA2 160 aa6.44□□□□□ -1.38
FOXN3-209ENST00000555353 KRTAP12-4P60329 112 aa6.38□□□□□ -1.39
FOXN3-209ENST00000555353 GPR98Q8WXG9 6306 aa6.32□□□□□ -1.4
FOXN3-209ENST00000555353 KRTAP20-2Q3LI61 65 aa6.3□□□□□ -1.4
FOXN3-209ENST00000555353 SYNE1Q8NF91 8797 aaKnown RBP6.25□□□□□ -1.41
FOXN3-209ENST00000555353 MT1AP04731 61 aa6.23□□□□□ -1.41
FOXN3-209ENST00000555353 LUZP6Q538Z0 58 aa6.21□□□□□ -1.42
FOXN3-209ENST00000555353 AHNAK2Q8IVF2 5795 aa6.19□□□□□ -1.42
FOXN3-209ENST00000555353 KRTAP6-1Q3LI64 71 aa6.17□□□□□ -1.42
FOXN3-209ENST00000555353 KRTAP5-3Q6L8H2 238 aa6.09□□□□□ -1.43
FOXN3-209ENST00000555353 KRTAP5-10Q6L8G5 202 aa6.05□□□□□ -1.44
FOXN3-209ENST00000555353 KRTAP9-4Q9BYQ2 154 aa5.99□□□□□ -1.45
FOXN3-209ENST00000555353 KRTAP5-2Q701N4 177 aa5.91□□□□□ -1.46
FOXN3-209ENST00000555353 KRTAP6-2Q3LI66 62 aa5.84□□□□□ -1.47
FOXN3-209ENST00000555353 KRTAP5-7Q6L8G8 165 aa5.77□□□□□ -1.49
FOXN3-209ENST00000555353 H3BS24 57 aa5.72□□□□□ -1.49
FOXN3-209ENST00000555353 MT3P25713 68 aa5.7□□□□□ -1.5
FOXN3-209ENST00000555353 NDUFAF8A1L188 74 aa5.69□□□□□ -1.5
FOXN3-209ENST00000555353 KRTAP4-11Q9BYQ6 195 aa5.69□□□□□ -1.5
FOXN3-209ENST00000555353 OBSCNQ5VST9 7968 aa5.51□□□□□ -1.53
FOXN3-209ENST00000555353 KRTAP5-8O75690 187 aa5.47□□□□□ -1.53
FOXN3-209ENST00000555353 KRTAP5-1Q6L8H4 278 aa5.24□□□□□ -1.57
FOXN3-209ENST00000555353 KRTAP9-9Q9BYP9 154 aa5.17□□□□□ -1.58
FOXN3-209ENST00000555353 LCE1EQ5T753 118 aa5.15□□□□□ -1.59
FOXN3-209ENST00000555353 LCE3DQ9BYE3 92 aa5.15□□□□□ -1.59
FOXN3-209ENST00000555353 A0A0A0MQY5 61 aa5.08□□□□□ -1.6
FOXN3-209ENST00000555353 MUC5ACP98088 5654 aa5.08□□□□□ -1.6
FOXN3-209ENST00000555353 MUC5BQ9HC84 5762 aaPredicted RBP5.02□□□□□ -1.61
FOXN3-209ENST00000555353 AHNAKQ09666 5890 aaKnown RBP4.97□□□□□ -1.61
FOXN3-209ENST00000555353 LCE3EQ5T5B0 92 aa4.97□□□□□ -1.61
FOXN3-209ENST00000555353 LCE1BQ5T7P3 118 aa4.85□□□□□ -1.63
FOXN3-209ENST00000555353 KRTAP4-2Q9BYR5 136 aa4.82□□□□□ -1.64
FOXN3-209ENST00000555353 LCE1CQ5T751 118 aa4.78□□□□□ -1.64
FOXN3-209ENST00000555353 INE1O15225 51 aa4.74□□□□□ -1.65
FOXN3-209ENST00000555353 KRTAP4-12Q9BQ66 201 aa4.48□□□□□ -1.69
FOXN3-209ENST00000555353 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.37□□□□□ -1.71
FOXN3-209ENST00000555353 KRTAP5-11Q6L8G4 156 aa4.3□□□□□ -1.72
FOXN3-209ENST00000555353 PRM1P04553 51 aa4.13□□□□□ -1.75
FOXN3-209ENST00000555353 LCE1FQ5T754 118 aa4.11□□□□□ -1.75
FOXN3-209ENST00000555353 KRTAP21-2Q3LI59 83 aa4.05□□□□□ -1.76
FOXN3-209ENST00000555353 PHGR1C9JFL3 82 aa3.7□□□□□ -1.82
FOXN3-209ENST00000555353 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
FOXN3-209ENST00000555353 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
FOXN3-209ENST00000555353 KRTAP21-1Q3LI58 79 aa2.67□□□□□ -1.98
FOXN3-209ENST00000555353 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 108.5 ms