RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 KRTAP19-6Q3LI70 58 aa5.58□□□□□ -1.52
MARK3-209ENST00000555235 KRTAP9-6A0A140TA67 174 aa5.57□□□□□ -1.52
MARK3-209ENST00000555235 FCGBPQ9Y6R7 5405 aaPredicted RBP5.53□□□□□ -1.52
MARK3-209ENST00000555235 KRTAP4-7Q9BYR0 210 aa5.5□□□□□ -1.53
MARK3-209ENST00000555235 MT1LQ93083 61 aa5.44□□□□□ -1.54
MARK3-209ENST00000555235 MT1EP04732 61 aa5.43□□□□□ -1.54
MARK3-209ENST00000555235 MACF1Q9UPN3 7388 aaKnown RBP5.39□□□□□ -1.55
MARK3-209ENST00000555235 SYNE2Q8WXH0 6885 aaKnown RBP5.31□□□□□ -1.56
MARK3-209ENST00000555235 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.25□□□□□ -1.57
MARK3-209ENST00000555235 LOC100996750A0A140TA64 210 aa5.12□□□□□ -1.59
MARK3-209ENST00000555235 KRTAP4-3Q9BYR4 195 aa5.12□□□□□ -1.59
MARK3-209ENST00000555235 KRTAP12-4P60329 112 aa5.07□□□□□ -1.6
MARK3-209ENST00000555235 MT1GP13640 62 aa5.07□□□□□ -1.6
MARK3-209ENST00000555235 KRTAP9-7A8MTY7 169 aa5.06□□□□□ -1.6
MARK3-209ENST00000555235 MT1MQ8N339 61 aa5.06□□□□□ -1.6
MARK3-209ENST00000555235 KRTAP19-3Q7Z4W3 81 aa5.03□□□□□ -1.6
MARK3-209ENST00000555235 KRTAP6-3Q3LI67 103 aa5□□□□□ -1.61
MARK3-209ENST00000555235 SPRR2FQ96RM1 72 aa4.99□□□□□ -1.61
MARK3-209ENST00000555235 MUC12Q9UKN1 5478 aa4.98□□□□□ -1.61
MARK3-209ENST00000555235 KRTAP5-9P26371 169 aa4.95□□□□□ -1.62
MARK3-209ENST00000555235 MDN1Q9NU22 5596 aa4.93□□□□□ -1.62
MARK3-209ENST00000555235 LCE5AQ5TCM9 118 aa4.85□□□□□ -1.63
MARK3-209ENST00000555235 SPRR2EP22531 72 aa4.79□□□□□ -1.64
MARK3-209ENST00000555235 SPRR2BP35325 72 aa4.79□□□□□ -1.64
MARK3-209ENST00000555235 SPRR2AP35326 72 aa4.79□□□□□ -1.64
MARK3-209ENST00000555235 NEBP20929 6669 aa4.77□□□□□ -1.65
MARK3-209ENST00000555235 LCE1AQ5T7P2 110 aa4.77□□□□□ -1.65
MARK3-209ENST00000555235 MT1AP04731 61 aa4.76□□□□□ -1.65
MARK3-209ENST00000555235 LCE3BQ5TA77 95 aa4.75□□□□□ -1.65
MARK3-209ENST00000555235 KRTAP4-9Q9BYQ8 210 aa4.67□□□□□ -1.66
MARK3-209ENST00000555235 DSTQ03001 7570 aaKnown RBP4.64□□□□□ -1.67
MARK3-209ENST00000555235 LCE3DQ9BYE3 92 aa4.62□□□□□ -1.67
MARK3-209ENST00000555235 SPRR2DP22532 72 aa4.62□□□□□ -1.67
MARK3-209ENST00000555235 KRTAP6-1Q3LI64 71 aa4.61□□□□□ -1.67
MARK3-209ENST00000555235 LCE3EQ5T5B0 92 aa4.6□□□□□ -1.67
MARK3-209ENST00000555235 KRTAP5-5Q701N2 237 aaPredicted RBP4.53□□□□□ -1.68
MARK3-209ENST00000555235 PRM1P04553 51 aa4.52□□□□□ -1.69
MARK3-209ENST00000555235 SYNE1Q8NF91 8797 aaKnown RBP4.51□□□□□ -1.69
MARK3-209ENST00000555235 LCE4AQ5TA78 99 aa4.5□□□□□ -1.69
MARK3-209ENST00000555235 KRTAP4-6Q9BYQ5 205 aa4.48□□□□□ -1.69
MARK3-209ENST00000555235 KRTAP9-4Q9BYQ2 154 aa4.48□□□□□ -1.69
MARK3-209ENST00000555235 KRTAP20-1Q3LI63 56 aa4.46□□□□□ -1.7
MARK3-209ENST00000555235 KRTAP9-9Q9BYP9 154 aa4.43□□□□□ -1.7
MARK3-209ENST00000555235 KRTAP2-2Q9BYT5 123 aa4.34□□□□□ -1.72
MARK3-209ENST00000555235 KRTAP6-2Q3LI66 62 aa4.29□□□□□ -1.72
MARK3-209ENST00000555235 KRTAP4-12Q9BQ66 201 aa4.19□□□□□ -1.74
MARK3-209ENST00000555235 MT3P25713 68 aa4.09□□□□□ -1.76
MARK3-209ENST00000555235 KRTAP5-4Q6L8H1 288 aa4.06□□□□□ -1.76
MARK3-209ENST00000555235 MT4P47944 62 aa4.05□□□□□ -1.76
MARK3-209ENST00000555235 LCE1DQ5T752 114 aa4□□□□□ -1.77
MARK3-209ENST00000555235 HMCN1Q96RW7 5635 aa3.99□□□□□ -1.77
MARK3-209ENST00000555235 KRTAP20-2Q3LI61 65 aa3.84□□□□□ -1.79
MARK3-209ENST00000555235 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
MARK3-209ENST00000555235 KRTAP5-3Q6L8H2 238 aa3.69□□□□□ -1.82
MARK3-209ENST00000555235 LCE1FQ5T754 118 aa3.65□□□□□ -1.82
MARK3-209ENST00000555235 KRTAP5-2Q701N4 177 aa3.64□□□□□ -1.83
MARK3-209ENST00000555235 AHNAK2Q8IVF2 5795 aa3.58□□□□□ -1.84
MARK3-209ENST00000555235 KRTAP4-2Q9BYR5 136 aa3.51□□□□□ -1.85
MARK3-209ENST00000555235 GPR98Q8WXG9 6306 aa3.5□□□□□ -1.85
MARK3-209ENST00000555235 KRTAP4-11Q9BYQ6 195 aa3.48□□□□□ -1.85
MARK3-209ENST00000555235 MUC5ACP98088 5654 aa3.48□□□□□ -1.85
MARK3-209ENST00000555235 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
MARK3-209ENST00000555235 KRTAP5-10Q6L8G5 202 aa3.45□□□□□ -1.86
MARK3-209ENST00000555235 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
MARK3-209ENST00000555235 LCE1BQ5T7P3 118 aa3.25□□□□□ -1.89
MARK3-209ENST00000555235 KRTAP5-1Q6L8H4 278 aa3.25□□□□□ -1.89
MARK3-209ENST00000555235 KRTAP5-7Q6L8G8 165 aa3.23□□□□□ -1.89
MARK3-209ENST00000555235 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
MARK3-209ENST00000555235 KRTAP21-2Q3LI59 83 aa2.99□□□□□ -1.93
MARK3-209ENST00000555235 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
MARK3-209ENST00000555235 MUC5BQ9HC84 5762 aaPredicted RBP2.96□□□□□ -1.94
MARK3-209ENST00000555235 KRTAP21-1Q3LI58 79 aa2.9□□□□□ -1.94
MARK3-209ENST00000555235 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
MARK3-209ENST00000555235 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
MARK3-209ENST00000555235 KRTAP5-11Q6L8G4 156 aa2.68□□□□□ -1.98
MARK3-209ENST00000555235 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
MARK3-209ENST00000555235 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
MARK3-209ENST00000555235 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 77.7 ms