RNA–Protein interactions for RNA: ENST00000554455.5

HNRNPC-211, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-211ENST00000554455 KRTAP2-1Q9BYU5 128 aa3.23□□□□□ -1.89
HNRNPC-211ENST00000554455 KRTAP5-9P26371 169 aa3.22□□□□□ -1.89
HNRNPC-211ENST00000554455 KRTAP10-5P60370 271 aa3.19□□□□□ -1.9
HNRNPC-211ENST00000554455 KRTAP19-8Q3LI54 63 aa3.13□□□□□ -1.91
HNRNPC-211ENST00000554455 MT1HP80294 61 aa3.12□□□□□ -1.91
HNRNPC-211ENST00000554455 MT2AP02795 61 aa3.11□□□□□ -1.91
HNRNPC-211ENST00000554455 KRTAP12-3P60328 96 aa3.11□□□□□ -1.91
HNRNPC-211ENST00000554455 M0R2T5 61 aa3.1□□□□□ -1.91
HNRNPC-211ENST00000554455 MT1FP04733 61 aa3.1□□□□□ -1.91
HNRNPC-211ENST00000554455 KRTAP5-11Q6L8G4 156 aa3.07□□□□□ -1.92
HNRNPC-211ENST00000554455 LCE1AQ5T7P2 110 aa3.05□□□□□ -1.92
HNRNPC-211ENST00000554455 MT1BP07438 61 aa3.04□□□□□ -1.92
HNRNPC-211ENST00000554455 KRTAP6-3Q3LI67 103 aa3.04□□□□□ -1.92
HNRNPC-211ENST00000554455 KRTAP5-4Q6L8H1 288 aa3.04□□□□□ -1.92
HNRNPC-211ENST00000554455 MT1XP80297 61 aa3.03□□□□□ -1.92
HNRNPC-211ENST00000554455 KRTAP10-7P60409 375 aaPredicted RBP3.01□□□□□ -1.93
HNRNPC-211ENST00000554455 LCE3CQ5T5A8 94 aa3□□□□□ -1.93
HNRNPC-211ENST00000554455 KRTAP5-1Q6L8H4 278 aa2.98□□□□□ -1.93
HNRNPC-211ENST00000554455 KRTAP12-4P60329 112 aa2.96□□□□□ -1.94
HNRNPC-211ENST00000554455 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
HNRNPC-211ENST00000554455 KRTAP9-6A8MVA2 160 aa2.88□□□□□ -1.95
HNRNPC-211ENST00000554455 KRTAP19-5Q3LI72 72 aa2.87□□□□□ -1.95
HNRNPC-211ENST00000554455 SYNE2Q8WXH0 6885 aaKnown RBP2.84□□□□□ -1.95
HNRNPC-211ENST00000554455 SSPOA2VEC9 5147 aa2.83□□□□□ -1.96
HNRNPC-211ENST00000554455 MACF1Q9UPN3 7388 aaKnown RBP2.83□□□□□ -1.96
HNRNPC-211ENST00000554455 USH2AO75445 5202 aa2.82□□□□□ -1.96
HNRNPC-211ENST00000554455 FCGBPQ9Y6R7 5405 aaPredicted RBP2.82□□□□□ -1.96
HNRNPC-211ENST00000554455 LCE1EQ5T753 118 aa2.79□□□□□ -1.96
HNRNPC-211ENST00000554455 KRTAP20-1Q3LI63 56 aa2.73□□□□□ -1.97
HNRNPC-211ENST00000554455 KRTAP19-7Q3SYF9 63 aa2.7□□□□□ -1.98
HNRNPC-211ENST00000554455 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
HNRNPC-211ENST00000554455 NEBP20929 6669 aa2.67□□□□□ -1.98
HNRNPC-211ENST00000554455 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
HNRNPC-211ENST00000554455 KRTAP19-6Q3LI70 58 aa2.64□□□□□ -1.99
HNRNPC-211ENST00000554455 MT1LQ93083 61 aa2.64□□□□□ -1.99
HNRNPC-211ENST00000554455 PRM1P04553 51 aa2.64□□□□□ -1.99
HNRNPC-211ENST00000554455 MT1EP04732 61 aa2.64□□□□□ -1.99
HNRNPC-211ENST00000554455 MUC12Q9UKN1 5478 aa2.58□□□□□ -2
HNRNPC-211ENST00000554455 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
HNRNPC-211ENST00000554455 MT1AP04731 61 aa2.56□□□□□ -2
HNRNPC-211ENST00000554455 MT3P25713 68 aa2.51□□□□□ -2.01
HNRNPC-211ENST00000554455 KMT2DO14686 5537 aa2.51□□□□□ -2.01
HNRNPC-211ENST00000554455 KRTAP4-3Q9BYR4 195 aa2.49□□□□□ -2.01
HNRNPC-211ENST00000554455 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
HNRNPC-211ENST00000554455 MT1GP13640 62 aa2.45□□□□□ -2.02
HNRNPC-211ENST00000554455 MT1MQ8N339 61 aa2.45□□□□□ -2.02
HNRNPC-211ENST00000554455 MDN1Q9NU22 5596 aa2.45□□□□□ -2.02
HNRNPC-211ENST00000554455 KRTAP19-3Q7Z4W3 81 aa2.44□□□□□ -2.02
HNRNPC-211ENST00000554455 GPR98Q8WXG9 6306 aa2.43□□□□□ -2.02
HNRNPC-211ENST00000554455 OBSCNQ5VST9 7968 aa2.42□□□□□ -2.02
HNRNPC-211ENST00000554455 SPRR2EP22531 72 aa2.42□□□□□ -2.02
HNRNPC-211ENST00000554455 SPRR2BP35325 72 aa2.42□□□□□ -2.02
HNRNPC-211ENST00000554455 SPRR2AP35326 72 aa2.42□□□□□ -2.02
HNRNPC-211ENST00000554455 LCE3DQ9BYE3 92 aa2.41□□□□□ -2.02
HNRNPC-211ENST00000554455 SYNE1Q8NF91 8797 aaKnown RBP2.4□□□□□ -2.03
HNRNPC-211ENST00000554455 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
HNRNPC-211ENST00000554455 SPRR2FQ96RM1 72 aa2.37□□□□□ -2.03
HNRNPC-211ENST00000554455 SPRR2DP22532 72 aa2.34□□□□□ -2.03
HNRNPC-211ENST00000554455 KRTAP6-2Q3LI66 62 aa2.33□□□□□ -2.04
HNRNPC-211ENST00000554455 HMCN1Q96RW7 5635 aa2.23□□□□□ -2.05
HNRNPC-211ENST00000554455 DSTQ03001 7570 aaKnown RBP2.22□□□□□ -2.05
HNRNPC-211ENST00000554455 KRTAP6-1Q3LI64 71 aa2.21□□□□□ -2.06
HNRNPC-211ENST00000554455 KRTAP5-10Q6L8G5 202 aa2.12□□□□□ -2.07
HNRNPC-211ENST00000554455 MT4P47944 62 aa2.1□□□□□ -2.07
HNRNPC-211ENST00000554455 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
HNRNPC-211ENST00000554455 AHNAK2Q8IVF2 5795 aa2.06□□□□□ -2.08
HNRNPC-211ENST00000554455 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
HNRNPC-211ENST00000554455 LCE1CQ5T751 118 aa1.85□□□□□ -2.11
HNRNPC-211ENST00000554455 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
HNRNPC-211ENST00000554455 KRTAP20-2Q3LI61 65 aa1.83□□□□□ -2.12
HNRNPC-211ENST00000554455 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
HNRNPC-211ENST00000554455 MUC5ACP98088 5654 aa1.8□□□□□ -2.12
HNRNPC-211ENST00000554455 MUC5BQ9HC84 5762 aaPredicted RBP1.73□□□□□ -2.13
HNRNPC-211ENST00000554455 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
HNRNPC-211ENST00000554455 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
HNRNPC-211ENST00000554455 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
HNRNPC-211ENST00000554455 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 118.3 ms