RNA–Protein interactions for RNA: ENST00000554417.1

HNRNPC-210, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-210ENST00000554417 PSPHP1O15172 72 aa3.04□□□□□ -1.92
HNRNPC-210ENST00000554417 MT1XP80297 61 aa3.02□□□□□ -1.93
HNRNPC-210ENST00000554417 A6NED7 52 aa3.01□□□□□ -1.93
HNRNPC-210ENST00000554417 KRTAP12-1P59990 96 aa3.01□□□□□ -1.93
HNRNPC-210ENST00000554417 KRTAP12-2P59991 146 aa3□□□□□ -1.93
HNRNPC-210ENST00000554417 A8MU10 97 aa2.99□□□□□ -1.93
HNRNPC-210ENST00000554417 FCGBPQ9Y6R7 5405 aaPredicted RBP2.99□□□□□ -1.93
HNRNPC-210ENST00000554417 KRTAP6-3Q3LI67 103 aa2.93□□□□□ -1.94
HNRNPC-210ENST00000554417 CDC42SE1Q9NRR8 79 aa2.93□□□□□ -1.94
HNRNPC-210ENST00000554417 TNP1P09430 55 aa2.92□□□□□ -1.94
HNRNPC-210ENST00000554417 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
HNRNPC-210ENST00000554417 MACF1Q9UPN3 7388 aaKnown RBP2.9□□□□□ -1.95
HNRNPC-210ENST00000554417 KRTAP8-1Q8IUC2 63 aa2.88□□□□□ -1.95
HNRNPC-210ENST00000554417 KRTAP25-1Q3LHN0 102 aa2.86□□□□□ -1.95
HNRNPC-210ENST00000554417 C10orf95Q9H7T3 257 aa2.85□□□□□ -1.95
HNRNPC-210ENST00000554417 LCE3AQ5TA76 89 aa2.84□□□□□ -1.95
HNRNPC-210ENST00000554417 SYNE2Q8WXH0 6885 aaKnown RBP2.82□□□□□ -1.96
HNRNPC-210ENST00000554417 ROMO1P60602 79 aa2.8□□□□□ -1.96
HNRNPC-210ENST00000554417 SPRR2FQ96RM1 72 aa2.8□□□□□ -1.96
HNRNPC-210ENST00000554417 BRK1Q8WUW1 75 aa2.79□□□□□ -1.96
HNRNPC-210ENST00000554417 LCE3CQ5T5A8 94 aa2.77□□□□□ -1.97
HNRNPC-210ENST00000554417 PP632Q6XCG6 107 aa2.76□□□□□ -1.97
HNRNPC-210ENST00000554417 SPRR2EP22531 72 aa2.71□□□□□ -1.98
HNRNPC-210ENST00000554417 SPRR2BP35325 72 aa2.71□□□□□ -1.98
HNRNPC-210ENST00000554417 SPRR2AP35326 72 aa2.71□□□□□ -1.98
HNRNPC-210ENST00000554417 KMT2DO14686 5537 aa2.71□□□□□ -1.98
HNRNPC-210ENST00000554417 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
HNRNPC-210ENST00000554417 KRTAP19-7Q3SYF9 63 aa2.7□□□□□ -1.98
HNRNPC-210ENST00000554417 MT1EP04732 61 aa2.68□□□□□ -1.98
HNRNPC-210ENST00000554417 KRTAP19-5Q3LI72 72 aa2.68□□□□□ -1.98
HNRNPC-210ENST00000554417 KRTAP12-3P60328 96 aa2.67□□□□□ -1.98
HNRNPC-210ENST00000554417 PMAIP1Q13794 54 aa2.67□□□□□ -1.98
HNRNPC-210ENST00000554417 MUC12Q9UKN1 5478 aa2.66□□□□□ -1.98
HNRNPC-210ENST00000554417 MT1GP13640 62 aa2.66□□□□□ -1.98
HNRNPC-210ENST00000554417 KRTAP5-5Q701N2 237 aaPredicted RBP2.66□□□□□ -1.98
HNRNPC-210ENST00000554417 KRTAP19-3Q7Z4W3 81 aa2.65□□□□□ -1.99
HNRNPC-210ENST00000554417 PRO0628Q9UI54 55 aa2.65□□□□□ -1.99
HNRNPC-210ENST00000554417 KRTAP2-3P0C7H8 128 aa2.63□□□□□ -1.99
HNRNPC-210ENST00000554417 SPRR2DP22532 72 aa2.63□□□□□ -1.99
HNRNPC-210ENST00000554417 KRTAP2-4Q9BYR9 128 aa2.63□□□□□ -1.99
HNRNPC-210ENST00000554417 NEBP20929 6669 aa2.61□□□□□ -1.99
HNRNPC-210ENST00000554417 KRTAP20-1Q3LI63 56 aa2.61□□□□□ -1.99
HNRNPC-210ENST00000554417 MT1LQ93083 61 aa2.59□□□□□ -1.99
HNRNPC-210ENST00000554417 MDN1Q9NU22 5596 aa2.58□□□□□ -2
HNRNPC-210ENST00000554417 NDUFAF8A1L188 74 aa2.56□□□□□ -2
HNRNPC-210ENST00000554417 PRAC1Q96KF2 57 aa2.56□□□□□ -2
HNRNPC-210ENST00000554417 KRTAP2-1Q9BYU5 128 aa2.56□□□□□ -2
HNRNPC-210ENST00000554417 LCE1CQ5T751 118 aa2.54□□□□□ -2
HNRNPC-210ENST00000554417 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
HNRNPC-210ENST00000554417 MT1MQ8N339 61 aa2.53□□□□□ -2
HNRNPC-210ENST00000554417 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
HNRNPC-210ENST00000554417 KTN1-AS1Q86SY8 53 aa2.48□□□□□ -2.01
HNRNPC-210ENST00000554417 DSTQ03001 7570 aaKnown RBP2.39□□□□□ -2.03
HNRNPC-210ENST00000554417 KRTAP12-4P60329 112 aa2.29□□□□□ -2.04
HNRNPC-210ENST00000554417 SPRR5A0A1B0GTR4 108 aa2.25□□□□□ -2.05
HNRNPC-210ENST00000554417 MT1AP04731 61 aa2.24□□□□□ -2.05
HNRNPC-210ENST00000554417 MT4P47944 62 aa2.24□□□□□ -2.05
HNRNPC-210ENST00000554417 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
HNRNPC-210ENST00000554417 LUZP6Q538Z0 58 aa2.19□□□□□ -2.06
HNRNPC-210ENST00000554417 KRTAP20-2Q3LI61 65 aa2.17□□□□□ -2.06
HNRNPC-210ENST00000554417 KRTAP6-1Q3LI64 71 aa2.16□□□□□ -2.06
HNRNPC-210ENST00000554417 HMCN1Q96RW7 5635 aa2.14□□□□□ -2.07
HNRNPC-210ENST00000554417 SYNE1Q8NF91 8797 aaKnown RBP2.09□□□□□ -2.07
HNRNPC-210ENST00000554417 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
HNRNPC-210ENST00000554417 KRTAP6-2Q3LI66 62 aa2.04□□□□□ -2.08
HNRNPC-210ENST00000554417 KRTAP5-10Q6L8G5 202 aa2□□□□□ -2.09
HNRNPC-210ENST00000554417 AHNAK2Q8IVF2 5795 aa1.92□□□□□ -2.1
HNRNPC-210ENST00000554417 GPR98Q8WXG9 6306 aa1.92□□□□□ -2.1
HNRNPC-210ENST00000554417 LCE3DQ9BYE3 92 aa1.87□□□□□ -2.11
HNRNPC-210ENST00000554417 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
HNRNPC-210ENST00000554417 MUC5ACP98088 5654 aa1.67□□□□□ -2.14
HNRNPC-210ENST00000554417 INE1O15225 51 aa1.63□□□□□ -2.15
HNRNPC-210ENST00000554417 MUC5BQ9HC84 5762 aaPredicted RBP1.58□□□□□ -2.16
HNRNPC-210ENST00000554417 AHNAKQ09666 5890 aaKnown RBP1.52□□□□□ -2.17
HNRNPC-210ENST00000554417 PRM1P04553 51 aa1.4□□□□□ -2.19
HNRNPC-210ENST00000554417 PHGR1C9JFL3 82 aa1.31□□□□□ -2.2
HNRNPC-210ENST00000554417 KRTAP21-1Q3LI58 79 aa0.93□□□□□ -2.26
HNRNPC-210ENST00000554417 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 12.6 ms