RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 KRTAP4-3Q9BYR4 195 aa5.74□□□□□ -1.49
PPP4R3A-202ENST00000554390 LOC100996750A0A140TA64 210 aa5.74□□□□□ -1.49
PPP4R3A-202ENST00000554390 MT1LQ93083 61 aa5.71□□□□□ -1.49
PPP4R3A-202ENST00000554390 CRCT1Q9UGL9 99 aa5.7□□□□□ -1.5
PPP4R3A-202ENST00000554390 MT1EP04732 61 aa5.67□□□□□ -1.5
PPP4R3A-202ENST00000554390 SYNE1Q8NF91 8797 aaKnown RBP5.65□□□□□ -1.51
PPP4R3A-202ENST00000554390 MT1GP13640 62 aa5.57□□□□□ -1.52
PPP4R3A-202ENST00000554390 KRTAP19-4Q3LI73 84 aa5.57□□□□□ -1.52
PPP4R3A-202ENST00000554390 OBSCNQ5VST9 7968 aa5.52□□□□□ -1.53
PPP4R3A-202ENST00000554390 KRTAP12-4P60329 112 aa5.45□□□□□ -1.54
PPP4R3A-202ENST00000554390 LCE2DQ5TA82 110 aaPredicted RBP5.45□□□□□ -1.54
PPP4R3A-202ENST00000554390 SYNE2Q8WXH0 6885 aaKnown RBP5.38□□□□□ -1.55
PPP4R3A-202ENST00000554390 KRTAP19-6Q3LI70 58 aa5.37□□□□□ -1.55
PPP4R3A-202ENST00000554390 MACF1Q9UPN3 7388 aaKnown RBP5.31□□□□□ -1.56
PPP4R3A-202ENST00000554390 MT1MQ8N339 61 aa5.31□□□□□ -1.56
PPP4R3A-202ENST00000554390 KRTAP4-9Q9BYQ8 210 aa5.29□□□□□ -1.56
PPP4R3A-202ENST00000554390 MDN1Q9NU22 5596 aa5.28□□□□□ -1.56
PPP4R3A-202ENST00000554390 KRTAP19-3Q7Z4W3 81 aa5.25□□□□□ -1.57
PPP4R3A-202ENST00000554390 LCE3BQ5TA77 95 aa5.24□□□□□ -1.57
PPP4R3A-202ENST00000554390 SPRR2FQ96RM1 72 aa5.19□□□□□ -1.58
PPP4R3A-202ENST00000554390 LCE5AQ5TCM9 118 aa5.03□□□□□ -1.6
PPP4R3A-202ENST00000554390 KRTAP9-2Q9BYQ4 174 aa4.98□□□□□ -1.61
PPP4R3A-202ENST00000554390 KRTAP6-1Q3LI64 71 aa4.97□□□□□ -1.61
PPP4R3A-202ENST00000554390 MT1AP04731 61 aa4.91□□□□□ -1.62
PPP4R3A-202ENST00000554390 KRTAP9-7A8MTY7 169 aa4.91□□□□□ -1.62
PPP4R3A-202ENST00000554390 PRM1P04553 51 aa4.89□□□□□ -1.63
PPP4R3A-202ENST00000554390 LCE3DQ9BYE3 92 aa4.87□□□□□ -1.63
PPP4R3A-202ENST00000554390 KRTAP5-5Q701N2 237 aaPredicted RBP4.86□□□□□ -1.63
PPP4R3A-202ENST00000554390 LCE3EQ5T5B0 92 aa4.84□□□□□ -1.63
PPP4R3A-202ENST00000554390 LCE1AQ5T7P2 110 aa4.66□□□□□ -1.66
PPP4R3A-202ENST00000554390 SPRR2EP22531 72 aa4.6□□□□□ -1.67
PPP4R3A-202ENST00000554390 SPRR2BP35325 72 aa4.6□□□□□ -1.67
PPP4R3A-202ENST00000554390 SPRR2AP35326 72 aa4.6□□□□□ -1.67
PPP4R3A-202ENST00000554390 KRTAP9-6A0A140TA67 174 aa4.59□□□□□ -1.67
PPP4R3A-202ENST00000554390 KRTAP6-2Q3LI66 62 aa4.59□□□□□ -1.68
PPP4R3A-202ENST00000554390 KRTAP6-3Q3LI67 103 aa4.56□□□□□ -1.68
PPP4R3A-202ENST00000554390 KRTAP5-9P26371 169 aa4.49□□□□□ -1.69
PPP4R3A-202ENST00000554390 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
PPP4R3A-202ENST00000554390 SPRR2DP22532 72 aa4.37□□□□□ -1.71
PPP4R3A-202ENST00000554390 KRTAP2-2Q9BYT5 123 aa4.35□□□□□ -1.71
PPP4R3A-202ENST00000554390 MT3P25713 68 aa4.23□□□□□ -1.73
PPP4R3A-202ENST00000554390 MT4P47944 62 aa4.08□□□□□ -1.76
PPP4R3A-202ENST00000554390 KRTAP4-6Q9BYQ5 205 aa4.08□□□□□ -1.76
PPP4R3A-202ENST00000554390 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
PPP4R3A-202ENST00000554390 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.04□□□□□ -1.76
PPP4R3A-202ENST00000554390 NEBP20929 6669 aa3.9□□□□□ -1.78
PPP4R3A-202ENST00000554390 KRTAP5-4Q6L8H1 288 aa3.9□□□□□ -1.78
PPP4R3A-202ENST00000554390 HMCN1Q96RW7 5635 aa3.9□□□□□ -1.79
PPP4R3A-202ENST00000554390 MUC19Q7Z5P9 8384 aa3.87□□□□□ -1.79
PPP4R3A-202ENST00000554390 MUC5ACP98088 5654 aa3.86□□□□□ -1.79
PPP4R3A-202ENST00000554390 LCE1DQ5T752 114 aa3.86□□□□□ -1.79
PPP4R3A-202ENST00000554390 KRTAP20-2Q3LI61 65 aa3.77□□□□□ -1.81
PPP4R3A-202ENST00000554390 LCE1BQ5T7P3 118 aa3.7□□□□□ -1.82
PPP4R3A-202ENST00000554390 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
PPP4R3A-202ENST00000554390 KRTAP4-11Q9BYQ6 195 aa3.66□□□□□ -1.82
PPP4R3A-202ENST00000554390 LCE4AQ5TA78 99 aa3.61□□□□□ -1.83
PPP4R3A-202ENST00000554390 KRTAP5-3Q6L8H2 238 aa3.52□□□□□ -1.85
PPP4R3A-202ENST00000554390 KRTAP5-10Q6L8G5 202 aa3.5□□□□□ -1.85
PPP4R3A-202ENST00000554390 KRTAP20-1Q3LI63 56 aa3.43□□□□□ -1.86
PPP4R3A-202ENST00000554390 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.87
PPP4R3A-202ENST00000554390 KRTAP4-2Q9BYR5 136 aa3.27□□□□□ -1.89
PPP4R3A-202ENST00000554390 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
PPP4R3A-202ENST00000554390 LCE1CQ5T751 118 aa3.17□□□□□ -1.9
PPP4R3A-202ENST00000554390 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
PPP4R3A-202ENST00000554390 MUC5BQ9HC84 5762 aaPredicted RBP3.14□□□□□ -1.91
PPP4R3A-202ENST00000554390 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
PPP4R3A-202ENST00000554390 KRTAP21-1Q3LI58 79 aa3.09□□□□□ -1.92
PPP4R3A-202ENST00000554390 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
PPP4R3A-202ENST00000554390 KRTAP4-12Q9BQ66 201 aa2.95□□□□□ -1.94
PPP4R3A-202ENST00000554390 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
PPP4R3A-202ENST00000554390 KRTAP5-8O75690 187 aa2.92□□□□□ -1.94
PPP4R3A-202ENST00000554390 KRTAP5-7Q6L8G8 165 aa2.75□□□□□ -1.97
PPP4R3A-202ENST00000554390 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.98
PPP4R3A-202ENST00000554390 GPR98Q8WXG9 6306 aa2.54□□□□□ -2
PPP4R3A-202ENST00000554390 KRTAP9-9Q9BYP9 154 aa2.43□□□□□ -2.02
PPP4R3A-202ENST00000554390 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
PPP4R3A-202ENST00000554390 AHNAKQ09666 5890 aaKnown RBP2.21□□□□□ -2.06
PPP4R3A-202ENST00000554390 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 81.2 ms