RNA–Protein interactions for RNA: ENST00000554325.1

APEX1-207, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-207ENST00000554325 SVIPQ8NHG7 77 aa4.68□□□□□ -1.66
APEX1-207ENST00000554325 KRTAP2-2Q9BYT5 123 aa4.68□□□□□ -1.66
APEX1-207ENST00000554325 KRTAP2-1Q9BYU5 128 aa4.68□□□□□ -1.66
APEX1-207ENST00000554325 BRK1Q8WUW1 75 aa4.65□□□□□ -1.67
APEX1-207ENST00000554325 KRTAP19-3Q7Z4W3 81 aa4.62□□□□□ -1.67
APEX1-207ENST00000554325 GPR98Q8WXG9 6306 aa4.6□□□□□ -1.67
APEX1-207ENST00000554325 KRTAP12-3P60328 96 aa4.6□□□□□ -1.67
APEX1-207ENST00000554325 KRTAP23-1A1A580 65 aa4.58□□□□□ -1.68
APEX1-207ENST00000554325 PP632Q6XCG6 107 aa4.58□□□□□ -1.68
APEX1-207ENST00000554325 LCE5AQ5TCM9 118 aa4.56□□□□□ -1.68
APEX1-207ENST00000554325 MT1GP13640 62 aa4.55□□□□□ -1.68
APEX1-207ENST00000554325 LCE3BQ5TA77 95 aa4.53□□□□□ -1.68
APEX1-207ENST00000554325 MT1LQ93083 61 aa4.53□□□□□ -1.68
APEX1-207ENST00000554325 MT1MQ8N339 61 aa4.46□□□□□ -1.7
APEX1-207ENST00000554325 KRTAP15-1Q3LI76 137 aa4.39□□□□□ -1.71
APEX1-207ENST00000554325 PMAIP1Q13794 54 aa4.38□□□□□ -1.71
APEX1-207ENST00000554325 KRTAP19-4Q3LI73 84 aa4.35□□□□□ -1.71
APEX1-207ENST00000554325 DSTQ03001 7570 aaKnown RBP4.34□□□□□ -1.72
APEX1-207ENST00000554325 KRTAP4-3Q9BYR4 195 aa4.32□□□□□ -1.72
APEX1-207ENST00000554325 KRTAP4-7Q9BYR0 210 aa4.31□□□□□ -1.72
APEX1-207ENST00000554325 PRO0628Q9UI54 55 aa4.27□□□□□ -1.73
APEX1-207ENST00000554325 LCE3CQ5T5A8 94 aa4.25□□□□□ -1.73
APEX1-207ENST00000554325 KRTAP4-9Q9BYQ8 210 aa4.21□□□□□ -1.74
APEX1-207ENST00000554325 LCE4AQ5TA78 99 aa4.15□□□□□ -1.75
APEX1-207ENST00000554325 HMCN1Q96RW7 5635 aa4.14□□□□□ -1.75
APEX1-207ENST00000554325 AHNAK2Q8IVF2 5795 aa4.14□□□□□ -1.75
APEX1-207ENST00000554325 PRAC1Q96KF2 57 aa4.11□□□□□ -1.75
APEX1-207ENST00000554325 MT4P47944 62 aa4.08□□□□□ -1.76
APEX1-207ENST00000554325 LCE1DQ5T752 114 aa4.08□□□□□ -1.76
APEX1-207ENST00000554325 LOC100996750A0A140TA64 210 aa4.07□□□□□ -1.76
APEX1-207ENST00000554325 KRTAP5-4Q6L8H1 288 aa4.05□□□□□ -1.76
APEX1-207ENST00000554325 KRTAP5-10Q6L8G5 202 aa4.03□□□□□ -1.76
APEX1-207ENST00000554325 KTN1-AS1Q86SY8 53 aa4.03□□□□□ -1.76
APEX1-207ENST00000554325 KRTAP5-5Q701N2 237 aaPredicted RBP4.01□□□□□ -1.77
APEX1-207ENST00000554325 KRTAP12-4P60329 112 aa3.96□□□□□ -1.78
APEX1-207ENST00000554325 KRTAP5-7Q6L8G8 165 aa3.95□□□□□ -1.78
APEX1-207ENST00000554325 KRTAP4-6Q9BYQ5 205 aa3.93□□□□□ -1.78
APEX1-207ENST00000554325 KRTAP9-6A8MVA2 160 aa3.92□□□□□ -1.78
APEX1-207ENST00000554325 MT1AP04731 61 aa3.88□□□□□ -1.79
APEX1-207ENST00000554325 SPRR5A0A1B0GTR4 108 aa3.87□□□□□ -1.79
APEX1-207ENST00000554325 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
APEX1-207ENST00000554325 KRTAP20-2Q3LI61 65 aa3.84□□□□□ -1.79
APEX1-207ENST00000554325 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
APEX1-207ENST00000554325 KRTAP5-3Q6L8H2 238 aa3.82□□□□□ -1.8
APEX1-207ENST00000554325 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
APEX1-207ENST00000554325 KRTAP6-2Q3LI66 62 aa3.62□□□□□ -1.83
APEX1-207ENST00000554325 KRTAP5-2Q701N4 177 aa3.6□□□□□ -1.83
APEX1-207ENST00000554325 AHNAKQ09666 5890 aaKnown RBP3.59□□□□□ -1.83
APEX1-207ENST00000554325 MT3P25713 68 aa3.57□□□□□ -1.84
APEX1-207ENST00000554325 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
APEX1-207ENST00000554325 MUC5ACP98088 5654 aa3.49□□□□□ -1.85
APEX1-207ENST00000554325 MUC5BQ9HC84 5762 aaPredicted RBP3.46□□□□□ -1.86
APEX1-207ENST00000554325 KRTAP4-11Q9BYQ6 195 aa3.45□□□□□ -1.86
APEX1-207ENST00000554325 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
APEX1-207ENST00000554325 OBSCNQ5VST9 7968 aa3.3□□□□□ -1.88
APEX1-207ENST00000554325 H3BS24 57 aa3.23□□□□□ -1.89
APEX1-207ENST00000554325 KRTAP9-9Q9BYP9 154 aa3.23□□□□□ -1.89
APEX1-207ENST00000554325 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
APEX1-207ENST00000554325 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
APEX1-207ENST00000554325 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
APEX1-207ENST00000554325 NDUFAF8A1L188 74 aa3.04□□□□□ -1.92
APEX1-207ENST00000554325 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
APEX1-207ENST00000554325 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
APEX1-207ENST00000554325 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
APEX1-207ENST00000554325 KRTAP4-2Q9BYR5 136 aa2.94□□□□□ -1.94
APEX1-207ENST00000554325 A0A0A0MQY5 61 aa2.82□□□□□ -1.96
APEX1-207ENST00000554325 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.68□□□□□ -1.98
APEX1-207ENST00000554325 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
APEX1-207ENST00000554325 KRTAP4-12Q9BQ66 201 aa2.61□□□□□ -1.99
APEX1-207ENST00000554325 INE1O15225 51 aa2.51□□□□□ -2.01
APEX1-207ENST00000554325 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
APEX1-207ENST00000554325 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
APEX1-207ENST00000554325 PRM1P04553 51 aa2.41□□□□□ -2.02
APEX1-207ENST00000554325 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
APEX1-207ENST00000554325 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
APEX1-207ENST00000554325 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
APEX1-207ENST00000554325 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
APEX1-207ENST00000554325 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms