RNA–Protein interactions for RNA: ENST00000553716.5

PGF-203, Transcript of placental growth factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PGF, Length 1,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGF-203ENST00000553716 KRTAP19-3Q7Z4W3 81 aa7.93□□□□□ -1.14
PGF-203ENST00000553716 H3BS24 57 aa7.92□□□□□ -1.14
PGF-203ENST00000553716 SPRR2FQ96RM1 72 aa7.9□□□□□ -1.14
PGF-203ENST00000553716 KRTAP9-6A8MVA2 160 aa7.89□□□□□ -1.15
PGF-203ENST00000553716 MT1GP13640 62 aa7.87□□□□□ -1.15
PGF-203ENST00000553716 MT1MQ8N339 61 aa7.82□□□□□ -1.16
PGF-203ENST00000553716 KRTAP5-9P26371 169 aa7.81□□□□□ -1.16
PGF-203ENST00000553716 LCE5AQ5TCM9 118 aa7.79□□□□□ -1.16
PGF-203ENST00000553716 KRTAP4-3Q9BYR4 195 aa7.7□□□□□ -1.18
PGF-203ENST00000553716 SYNE2Q8WXH0 6885 aaKnown RBP7.67□□□□□ -1.18
PGF-203ENST00000553716 LCE1AQ5T7P2 110 aa7.59□□□□□ -1.19
PGF-203ENST00000553716 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.57□□□□□ -1.2
PGF-203ENST00000553716 MDN1Q9NU22 5596 aa7.52□□□□□ -1.21
PGF-203ENST00000553716 KRTAP6-3Q3LI67 103 aa7.51□□□□□ -1.21
PGF-203ENST00000553716 LOC100996750A0A140TA64 210 aa7.49□□□□□ -1.21
PGF-203ENST00000553716 SPRR2EP22531 72 aa7.41□□□□□ -1.22
PGF-203ENST00000553716 SPRR2BP35325 72 aa7.41□□□□□ -1.22
PGF-203ENST00000553716 SPRR2AP35326 72 aa7.41□□□□□ -1.22
PGF-203ENST00000553716 KRTAP2-3P0C7H8 128 aa7.39□□□□□ -1.23
PGF-203ENST00000553716 KRTAP2-4Q9BYR9 128 aa7.39□□□□□ -1.23
PGF-203ENST00000553716 KRTAP2-1Q9BYU5 128 aa7.39□□□□□ -1.23
PGF-203ENST00000553716 A0A0A0MQY5 61 aa7.32□□□□□ -1.24
PGF-203ENST00000553716 DSTQ03001 7570 aaKnown RBP7.27□□□□□ -1.25
PGF-203ENST00000553716 SPRR2DP22532 72 aa7.13□□□□□ -1.27
PGF-203ENST00000553716 KRTAP9-7A8MTY7 169 aa7.09□□□□□ -1.27
PGF-203ENST00000553716 KRTAP5-5Q701N2 237 aaPredicted RBP7.08□□□□□ -1.28
PGF-203ENST00000553716 MT1AP04731 61 aa6.96□□□□□ -1.3
PGF-203ENST00000553716 NEBP20929 6669 aa6.94□□□□□ -1.3
PGF-203ENST00000553716 KRTAP6-1Q3LI64 71 aa6.92□□□□□ -1.3
PGF-203ENST00000553716 INE1O15225 51 aa6.88□□□□□ -1.31
PGF-203ENST00000553716 LCE3BQ5TA77 95 aa6.84□□□□□ -1.31
PGF-203ENST00000553716 SYNE1Q8NF91 8797 aaKnown RBP6.66□□□□□ -1.34
PGF-203ENST00000553716 KRTAP5-4Q6L8H1 288 aa6.61□□□□□ -1.35
PGF-203ENST00000553716 KRTAP9-4Q9BYQ2 154 aa6.59□□□□□ -1.35
PGF-203ENST00000553716 KRTAP4-9Q9BYQ8 210 aa6.45□□□□□ -1.38
PGF-203ENST00000553716 KRTAP12-4P60329 112 aa6.38□□□□□ -1.39
PGF-203ENST00000553716 LCE4AQ5TA78 99 aa6.36□□□□□ -1.39
PGF-203ENST00000553716 KRTAP2-2Q9BYT5 123 aa6.36□□□□□ -1.39
PGF-203ENST00000553716 KRTAP6-2Q3LI66 62 aa6.3□□□□□ -1.4
PGF-203ENST00000553716 MT3P25713 68 aa6.26□□□□□ -1.41
PGF-203ENST00000553716 KRTAP20-1Q3LI63 56 aa6.24□□□□□ -1.41
PGF-203ENST00000553716 KRTAP4-6Q9BYQ5 205 aa6.24□□□□□ -1.41
PGF-203ENST00000553716 LCE3DQ9BYE3 92 aa6.2□□□□□ -1.42
PGF-203ENST00000553716 MT4P47944 62 aa6.18□□□□□ -1.42
PGF-203ENST00000553716 KRTAP20-2Q3LI61 65 aa6.14□□□□□ -1.43
PGF-203ENST00000553716 LCE1DQ5T752 114 aa6.07□□□□□ -1.44
PGF-203ENST00000553716 LCE3EQ5T5B0 92 aa6.07□□□□□ -1.44
PGF-203ENST00000553716 KRTAP5-2Q701N4 177 aa6.07□□□□□ -1.44
PGF-203ENST00000553716 HMCN1Q96RW7 5635 aa6.04□□□□□ -1.44
PGF-203ENST00000553716 KRTAP5-3Q6L8H2 238 aa5.94□□□□□ -1.46
PGF-203ENST00000553716 OBSCNQ5VST9 7968 aa5.73□□□□□ -1.49
PGF-203ENST00000553716 GPR98Q8WXG9 6306 aa5.45□□□□□ -1.54
PGF-203ENST00000553716 PRM1P04553 51 aa5.43□□□□□ -1.54
PGF-203ENST00000553716 LCE1EQ5T753 118 aa5.4□□□□□ -1.54
PGF-203ENST00000553716 AHNAK2Q8IVF2 5795 aa5.26□□□□□ -1.57
PGF-203ENST00000553716 KRTAP4-11Q9BYQ6 195 aa5.24□□□□□ -1.57
PGF-203ENST00000553716 KRTAP5-1Q6L8H4 278 aa5.2□□□□□ -1.58
PGF-203ENST00000553716 MUC5ACP98088 5654 aa5.15□□□□□ -1.59
PGF-203ENST00000553716 KRTAP5-10Q6L8G5 202 aa5.14□□□□□ -1.59
PGF-203ENST00000553716 KRTAP5-8O75690 187 aa5.07□□□□□ -1.6
PGF-203ENST00000553716 KRTAP4-2Q9BYR5 136 aa5.07□□□□□ -1.6
PGF-203ENST00000553716 LCE1CQ5T751 118 aa5.05□□□□□ -1.6
PGF-203ENST00000553716 LCE1BQ5T7P3 118 aa5.05□□□□□ -1.6
PGF-203ENST00000553716 KRTAP5-7Q6L8G8 165 aa4.99□□□□□ -1.61
PGF-203ENST00000553716 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.77□□□□□ -1.65
PGF-203ENST00000553716 KRTAP21-2Q3LI59 83 aa4.54□□□□□ -1.68
PGF-203ENST00000553716 KRTAP5-11Q6L8G4 156 aa4.43□□□□□ -1.7
PGF-203ENST00000553716 KRTAP9-9Q9BYP9 154 aa4.42□□□□□ -1.7
PGF-203ENST00000553716 MUC5BQ9HC84 5762 aaPredicted RBP4.32□□□□□ -1.72
PGF-203ENST00000553716 AHNAKQ09666 5890 aaKnown RBP4.16□□□□□ -1.74
PGF-203ENST00000553716 KRTAP4-12Q9BQ66 201 aa4.09□□□□□ -1.76
PGF-203ENST00000553716 KRTAP4-4Q9BYR3 166 aa3.98□□□□□ -1.77
PGF-203ENST00000553716 LCE1FQ5T754 118 aa3.9□□□□□ -1.79
PGF-203ENST00000553716 PHGR1C9JFL3 82 aa3.81□□□□□ -1.8
PGF-203ENST00000553716 KRTAP21-1Q3LI58 79 aa3.41□□□□□ -1.86
PGF-203ENST00000553716 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.87
PGF-203ENST00000553716 MUC16Q8WXI7 14507 aa2.53□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 112.5 ms