RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 KRTAP19-7Q3SYF9 63 aa4.32□□□□□ -1.72
HDAC7-230ENST00000552960 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
HDAC7-230ENST00000552960 KRTAP9-2Q9BYQ4 174 aa4.31□□□□□ -1.72
HDAC7-230ENST00000552960 CRCT1Q9UGL9 99 aa4.25□□□□□ -1.73
HDAC7-230ENST00000552960 MDN1Q9NU22 5596 aa4.21□□□□□ -1.74
HDAC7-230ENST00000552960 KRTAP2-3P0C7H8 128 aa4.21□□□□□ -1.74
HDAC7-230ENST00000552960 KRTAP2-4Q9BYR9 128 aa4.21□□□□□ -1.74
HDAC7-230ENST00000552960 KRTAP2-1Q9BYU5 128 aa4.21□□□□□ -1.74
HDAC7-230ENST00000552960 MT1EP04732 61 aa4.19□□□□□ -1.74
HDAC7-230ENST00000552960 MT1LQ93083 61 aa4.16□□□□□ -1.74
HDAC7-230ENST00000552960 SPRR2FQ96RM1 72 aa4.13□□□□□ -1.75
HDAC7-230ENST00000552960 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
HDAC7-230ENST00000552960 LOC100996750A0A140TA64 210 aa4.1□□□□□ -1.75
HDAC7-230ENST00000552960 MT1GP13640 62 aa4.04□□□□□ -1.76
HDAC7-230ENST00000552960 KRTAP12-4P60329 112 aa3.99□□□□□ -1.77
HDAC7-230ENST00000552960 KRTAP19-3Q7Z4W3 81 aa3.97□□□□□ -1.77
HDAC7-230ENST00000552960 KRTAP19-4Q3LI73 84 aa3.94□□□□□ -1.78
HDAC7-230ENST00000552960 MT1MQ8N339 61 aa3.94□□□□□ -1.78
HDAC7-230ENST00000552960 LCE5AQ5TCM9 118 aa3.89□□□□□ -1.79
HDAC7-230ENST00000552960 KRTAP9-6A0A140TA67 174 aa3.84□□□□□ -1.79
HDAC7-230ENST00000552960 KRTAP5-9P26371 169 aa3.83□□□□□ -1.8
HDAC7-230ENST00000552960 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.83□□□□□ -1.8
HDAC7-230ENST00000552960 LCE1AQ5T7P2 110 aa3.83□□□□□ -1.8
HDAC7-230ENST00000552960 LCE3BQ5TA77 95 aa3.82□□□□□ -1.8
HDAC7-230ENST00000552960 KRTAP4-9Q9BYQ8 210 aa3.8□□□□□ -1.8
HDAC7-230ENST00000552960 SPRR2EP22531 72 aa3.78□□□□□ -1.8
HDAC7-230ENST00000552960 SPRR2BP35325 72 aa3.78□□□□□ -1.8
HDAC7-230ENST00000552960 SPRR2AP35326 72 aa3.78□□□□□ -1.8
HDAC7-230ENST00000552960 KRTAP6-3Q3LI67 103 aa3.67□□□□□ -1.82
HDAC7-230ENST00000552960 NEBP20929 6669 aa3.62□□□□□ -1.83
HDAC7-230ENST00000552960 SPRR2DP22532 72 aa3.62□□□□□ -1.83
HDAC7-230ENST00000552960 KRTAP9-7A8MTY7 169 aa3.59□□□□□ -1.83
HDAC7-230ENST00000552960 KRTAP6-1Q3LI64 71 aa3.59□□□□□ -1.84
HDAC7-230ENST00000552960 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
HDAC7-230ENST00000552960 PRM1P04553 51 aa3.56□□□□□ -1.84
HDAC7-230ENST00000552960 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
HDAC7-230ENST00000552960 KRTAP5-5Q701N2 237 aaPredicted RBP3.51□□□□□ -1.85
HDAC7-230ENST00000552960 MT1AP04731 61 aa3.48□□□□□ -1.85
HDAC7-230ENST00000552960 MT4P47944 62 aa3.35□□□□□ -1.87
HDAC7-230ENST00000552960 KRTAP6-2Q3LI66 62 aa3.32□□□□□ -1.88
HDAC7-230ENST00000552960 KRTAP9-4Q9BYQ2 154 aa3.28□□□□□ -1.88
HDAC7-230ENST00000552960 KRTAP4-6Q9BYQ5 205 aa3.27□□□□□ -1.89
HDAC7-230ENST00000552960 HMCN1Q96RW7 5635 aa3.26□□□□□ -1.89
HDAC7-230ENST00000552960 KRTAP5-4Q6L8H1 288 aa3.23□□□□□ -1.89
HDAC7-230ENST00000552960 KRTAP2-2Q9BYT5 123 aa3.17□□□□□ -1.9
HDAC7-230ENST00000552960 MT3P25713 68 aa3.13□□□□□ -1.91
HDAC7-230ENST00000552960 LCE1DQ5T752 114 aa3.12□□□□□ -1.91
HDAC7-230ENST00000552960 KRTAP20-1Q3LI63 56 aa3.11□□□□□ -1.91
HDAC7-230ENST00000552960 KRTAP20-2Q3LI61 65 aa3.08□□□□□ -1.92
HDAC7-230ENST00000552960 LCE1EQ5T753 118 aa3.06□□□□□ -1.92
HDAC7-230ENST00000552960 LCE4AQ5TA78 99 aa3.06□□□□□ -1.92
HDAC7-230ENST00000552960 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
HDAC7-230ENST00000552960 KRTAP5-2Q701N4 177 aa2.95□□□□□ -1.94
HDAC7-230ENST00000552960 KRTAP5-3Q6L8H2 238 aa2.95□□□□□ -1.94
HDAC7-230ENST00000552960 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
HDAC7-230ENST00000552960 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
HDAC7-230ENST00000552960 MUC5ACP98088 5654 aa2.8□□□□□ -1.96
HDAC7-230ENST00000552960 KRTAP4-11Q9BYQ6 195 aa2.73□□□□□ -1.97
HDAC7-230ENST00000552960 AHNAK2Q8IVF2 5795 aa2.72□□□□□ -1.97
HDAC7-230ENST00000552960 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
HDAC7-230ENST00000552960 KRTAP5-8O75690 187 aa2.54□□□□□ -2
HDAC7-230ENST00000552960 KRTAP4-2Q9BYR5 136 aa2.54□□□□□ -2
HDAC7-230ENST00000552960 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
HDAC7-230ENST00000552960 KRTAP5-10Q6L8G5 202 aa2.51□□□□□ -2.01
HDAC7-230ENST00000552960 KRTAP9-9Q9BYP9 154 aa2.49□□□□□ -2.01
HDAC7-230ENST00000552960 GPR98Q8WXG9 6306 aa2.46□□□□□ -2.02
HDAC7-230ENST00000552960 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
HDAC7-230ENST00000552960 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
HDAC7-230ENST00000552960 KRTAP4-12Q9BQ66 201 aa2.36□□□□□ -2.03
HDAC7-230ENST00000552960 KRTAP5-7Q6L8G8 165 aa2.35□□□□□ -2.03
HDAC7-230ENST00000552960 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
HDAC7-230ENST00000552960 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
HDAC7-230ENST00000552960 KRTAP5-11Q6L8G4 156 aa2.13□□□□□ -2.07
HDAC7-230ENST00000552960 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
HDAC7-230ENST00000552960 AHNAKQ09666 5890 aaKnown RBP1.98□□□□□ -2.09
HDAC7-230ENST00000552960 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
HDAC7-230ENST00000552960 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 90.8 ms