RNA–Protein interactions for RNA: ENST00000552943.5

WDR90-224, Transcript of WD repeat domain 90, humanhuman

TSL 1 (best)

Gene WDR90, Length 5,498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR90-224ENST00000552943 LCE2AQ5TA79 106 aaPredicted RBP6.11□□□□□ -1.43
WDR90-224ENST00000552943 RNF213Q63HN8 5207 aa6.1□□□□□ -1.43
WDR90-224ENST00000552943 HMCN2Q8NDA2 5059 aa6.04□□□□□ -1.44
WDR90-224ENST00000552943 LOC100996750A0A140TA64 210 aa6.02□□□□□ -1.45
WDR90-224ENST00000552943 KRTAP19-7Q3SYF9 63 aa6.02□□□□□ -1.45
WDR90-224ENST00000552943 KRTAP4-3Q9BYR4 195 aa5.99□□□□□ -1.45
WDR90-224ENST00000552943 UBR4Q5T4S7 5183 aa5.98□□□□□ -1.45
WDR90-224ENST00000552943 LCE2DQ5TA82 110 aaPredicted RBP5.96□□□□□ -1.46
WDR90-224ENST00000552943 KRTAP9-2Q9BYQ4 174 aa5.95□□□□□ -1.46
WDR90-224ENST00000552943 MT3P25713 68 aa5.93□□□□□ -1.46
WDR90-224ENST00000552943 PRM1P04553 51 aa5.8□□□□□ -1.48
WDR90-224ENST00000552943 MT4P47944 62 aa5.78□□□□□ -1.48
WDR90-224ENST00000552943 FSIP2Q5CZC0 6907 aa5.78□□□□□ -1.48
WDR90-224ENST00000552943 MT1AP04731 61 aa5.74□□□□□ -1.49
WDR90-224ENST00000552943 KRTAP2-3P0C7H8 128 aa5.73□□□□□ -1.49
WDR90-224ENST00000552943 KRTAP2-4Q9BYR9 128 aa5.73□□□□□ -1.49
WDR90-224ENST00000552943 KRTAP2-1Q9BYU5 128 aa5.73□□□□□ -1.49
WDR90-224ENST00000552943 SYNE1Q8NF91 8797 aaKnown RBP5.69□□□□□ -1.5
WDR90-224ENST00000552943 MUC2Q02817 5179 aa5.61□□□□□ -1.51
WDR90-224ENST00000552943 KRTAP9-6A0A140TA67 174 aa5.54□□□□□ -1.52
WDR90-224ENST00000552943 KRTAP9-6A8MVA2 160 aa5.54□□□□□ -1.52
WDR90-224ENST00000552943 KRTAP4-9Q9BYQ8 210 aa5.54□□□□□ -1.52
WDR90-224ENST00000552943 LCE1DQ5T752 114 aa5.51□□□□□ -1.53
WDR90-224ENST00000552943 LCE1AQ5T7P2 110 aa5.5□□□□□ -1.53
WDR90-224ENST00000552943 LCE1BQ5T7P3 118 aa5.49□□□□□ -1.53
WDR90-224ENST00000552943 LCE5AQ5TCM9 118 aa5.46□□□□□ -1.54
WDR90-224ENST00000552943 KRTAP6-1Q3LI64 71 aa5.41□□□□□ -1.54
WDR90-224ENST00000552943 KRTAP6-3Q3LI67 103 aa5.39□□□□□ -1.55
WDR90-224ENST00000552943 SYNE2Q8WXH0 6885 aaKnown RBP5.34□□□□□ -1.55
WDR90-224ENST00000552943 KRTAP9-4Q9BYQ2 154 aa5.3□□□□□ -1.56
WDR90-224ENST00000552943 KRTAP6-2Q3LI66 62 aa5.27□□□□□ -1.57
WDR90-224ENST00000552943 KRTAP9-7A8MTY7 169 aa5.26□□□□□ -1.57
WDR90-224ENST00000552943 OBSCNQ5VST9 7968 aa5.24□□□□□ -1.57
WDR90-224ENST00000552943 KRTAP20-1Q3LI63 56 aa5.24□□□□□ -1.57
WDR90-224ENST00000552943 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.2□□□□□ -1.58
WDR90-224ENST00000552943 USH2AO75445 5202 aa5.15□□□□□ -1.58
WDR90-224ENST00000552943 LCE4AQ5TA78 99 aa5.15□□□□□ -1.59
WDR90-224ENST00000552943 KRTAP2-2Q9BYT5 123 aa5.01□□□□□ -1.61
WDR90-224ENST00000552943 FCGBPQ9Y6R7 5405 aaPredicted RBP5□□□□□ -1.61
WDR90-224ENST00000552943 KMT2DO14686 5537 aa4.91□□□□□ -1.62
WDR90-224ENST00000552943 DSTQ03001 7570 aaKnown RBP4.78□□□□□ -1.64
WDR90-224ENST00000552943 KRTAP5-9P26371 169 aa4.77□□□□□ -1.65
WDR90-224ENST00000552943 SSPOA2VEC9 5147 aa4.73□□□□□ -1.65
WDR90-224ENST00000552943 MACF1Q9UPN3 7388 aaKnown RBP4.72□□□□□ -1.65
WDR90-224ENST00000552943 MUC12Q9UKN1 5478 aa4.57□□□□□ -1.68
WDR90-224ENST00000552943 LCE1CQ5T751 118 aa4.55□□□□□ -1.68
WDR90-224ENST00000552943 LCE1EQ5T753 118 aa4.55□□□□□ -1.68
WDR90-224ENST00000552943 LCE1FQ5T754 118 aa4.55□□□□□ -1.68
WDR90-224ENST00000552943 NEBP20929 6669 aa4.49□□□□□ -1.69
WDR90-224ENST00000552943 KRTAP4-6Q9BYQ5 205 aa4.46□□□□□ -1.7
WDR90-224ENST00000552943 KRTAP20-2Q3LI61 65 aa4.42□□□□□ -1.7
WDR90-224ENST00000552943 KRTAP9-9Q9BYP9 154 aa4.33□□□□□ -1.72
WDR90-224ENST00000552943 KRTAP4-11Q9BYQ6 195 aa4.25□□□□□ -1.73
WDR90-224ENST00000552943 MDN1Q9NU22 5596 aa4.24□□□□□ -1.73
WDR90-224ENST00000552943 MUC19Q7Z5P9 8384 aa4.22□□□□□ -1.73
WDR90-224ENST00000552943 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
WDR90-224ENST00000552943 KRTAP5-5Q701N2 237 aaPredicted RBP4.13□□□□□ -1.75
WDR90-224ENST00000552943 KRTAP4-4Q9BYR3 166 aa3.88□□□□□ -1.79
WDR90-224ENST00000552943 KRTAP4-12Q9BQ66 201 aa3.81□□□□□ -1.8
WDR90-224ENST00000552943 KRTAP4-2Q9BYR5 136 aa3.81□□□□□ -1.8
WDR90-224ENST00000552943 GPR98Q8WXG9 6306 aa3.75□□□□□ -1.81
WDR90-224ENST00000552943 MUC5ACP98088 5654 aa3.6□□□□□ -1.83
WDR90-224ENST00000552943 KRTAP5-3Q6L8H2 238 aa3.59□□□□□ -1.83
WDR90-224ENST00000552943 HMCN1Q96RW7 5635 aa3.41□□□□□ -1.86
WDR90-224ENST00000552943 KRTAP5-2Q701N4 177 aa3.38□□□□□ -1.87
WDR90-224ENST00000552943 KRTAP5-10Q6L8G5 202 aa3.31□□□□□ -1.88
WDR90-224ENST00000552943 AHNAK2Q8IVF2 5795 aa3.27□□□□□ -1.89
WDR90-224ENST00000552943 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
WDR90-224ENST00000552943 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
WDR90-224ENST00000552943 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
WDR90-224ENST00000552943 KRTAP5-1Q6L8H4 278 aa2.94□□□□□ -1.94
WDR90-224ENST00000552943 KRTAP21-2Q3LI59 83 aa2.86□□□□□ -1.95
WDR90-224ENST00000552943 AHNAKQ09666 5890 aaKnown RBP2.8□□□□□ -1.96
WDR90-224ENST00000552943 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
WDR90-224ENST00000552943 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
WDR90-224ENST00000552943 KRTAP21-1Q3LI58 79 aa2.56□□□□□ -2
WDR90-224ENST00000552943 KRTAP5-7Q6L8G8 165 aa2.4□□□□□ -2.02
WDR90-224ENST00000552943 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 10.5 ms