RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 LCE3BQ5TA77 95 aa4.76□□□□□ -1.65
CKAP4-202ENST00000552828 KRTAP10-12P60413 245 aa4.74□□□□□ -1.65
CKAP4-202ENST00000552828 KRTAP10-7P60409 375 aaPredicted RBP4.73□□□□□ -1.65
CKAP4-202ENST00000552828 GPR98Q8WXG9 6306 aa4.73□□□□□ -1.65
CKAP4-202ENST00000552828 A0A0D9SG42 100 aa4.72□□□□□ -1.65
CKAP4-202ENST00000552828 CAMK2N1Q7Z7J9 78 aa4.68□□□□□ -1.66
CKAP4-202ENST00000552828 KRTAP12-1P59990 96 aa4.67□□□□□ -1.66
CKAP4-202ENST00000552828 SPINT4Q6UDR6 99 aa4.64□□□□□ -1.67
CKAP4-202ENST00000552828 DSTQ03001 7570 aaKnown RBP4.61□□□□□ -1.67
CKAP4-202ENST00000552828 LCE5AQ5TCM9 118 aa4.51□□□□□ -1.69
CKAP4-202ENST00000552828 KRTAP4-9Q9BYQ8 210 aa4.49□□□□□ -1.69
CKAP4-202ENST00000552828 C10orf95Q9H7T3 257 aa4.47□□□□□ -1.69
CKAP4-202ENST00000552828 KRTAP19-7Q3SYF9 63 aa4.46□□□□□ -1.7
CKAP4-202ENST00000552828 KRTAP19-3Q7Z4W3 81 aa4.44□□□□□ -1.7
CKAP4-202ENST00000552828 MT1EP04732 61 aa4.43□□□□□ -1.7
CKAP4-202ENST00000552828 KRTAP15-1Q3LI76 137 aa4.41□□□□□ -1.7
CKAP4-202ENST00000552828 HMCN1Q96RW7 5635 aa4.39□□□□□ -1.71
CKAP4-202ENST00000552828 LCE1DQ5T752 114 aa4.37□□□□□ -1.71
CKAP4-202ENST00000552828 TNP1P09430 55 aa4.36□□□□□ -1.71
CKAP4-202ENST00000552828 PP632Q6XCG6 107 aa4.34□□□□□ -1.71
CKAP4-202ENST00000552828 MT1GP13640 62 aa4.32□□□□□ -1.72
CKAP4-202ENST00000552828 LCE4AQ5TA78 99 aa4.31□□□□□ -1.72
CKAP4-202ENST00000552828 AHNAK2Q8IVF2 5795 aa4.29□□□□□ -1.72
CKAP4-202ENST00000552828 MT4P47944 62 aa4.26□□□□□ -1.73
CKAP4-202ENST00000552828 KRTAP19-5Q3LI72 72 aa4.26□□□□□ -1.73
CKAP4-202ENST00000552828 LCE3AQ5TA76 89 aa4.24□□□□□ -1.73
CKAP4-202ENST00000552828 MT1MQ8N339 61 aa4.23□□□□□ -1.73
CKAP4-202ENST00000552828 KRTAP5-10Q6L8G5 202 aa4.21□□□□□ -1.74
CKAP4-202ENST00000552828 KRTAP5-4Q6L8H1 288 aa4.21□□□□□ -1.74
CKAP4-202ENST00000552828 MT1LQ93083 61 aa4.19□□□□□ -1.74
CKAP4-202ENST00000552828 KRTAP4-6Q9BYQ5 205 aa4.15□□□□□ -1.75
CKAP4-202ENST00000552828 NDUFAF8A1L188 74 aa4.13□□□□□ -1.75
CKAP4-202ENST00000552828 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
CKAP4-202ENST00000552828 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
CKAP4-202ENST00000552828 KRTAP12-3P60328 96 aa4.1□□□□□ -1.75
CKAP4-202ENST00000552828 KRTAP5-7Q6L8G8 165 aa4.09□□□□□ -1.75
CKAP4-202ENST00000552828 LOC100996750A0A140TA64 210 aa4.07□□□□□ -1.76
CKAP4-202ENST00000552828 KRTAP4-12Q9BQ66 201 aa4.06□□□□□ -1.76
CKAP4-202ENST00000552828 KRTAP5-3Q6L8H2 238 aa4.04□□□□□ -1.76
CKAP4-202ENST00000552828 SPRR5A0A1B0GTR4 108 aa4□□□□□ -1.77
CKAP4-202ENST00000552828 KRTAP9-9Q9BYP9 154 aa4□□□□□ -1.77
CKAP4-202ENST00000552828 LUZP6Q538Z0 58 aa3.99□□□□□ -1.77
CKAP4-202ENST00000552828 KRTAP20-2Q3LI61 65 aa3.97□□□□□ -1.77
CKAP4-202ENST00000552828 KRTAP4-7Q9BYR0 210 aa3.95□□□□□ -1.78
CKAP4-202ENST00000552828 KRTAP5-5Q701N2 237 aaPredicted RBP3.93□□□□□ -1.78
CKAP4-202ENST00000552828 KRTAP12-4P60329 112 aa3.86□□□□□ -1.79
CKAP4-202ENST00000552828 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.79
CKAP4-202ENST00000552828 LCE3CQ5T5A8 94 aa3.8□□□□□ -1.8
CKAP4-202ENST00000552828 KRTAP4-11Q9BYQ6 195 aa3.69□□□□□ -1.82
CKAP4-202ENST00000552828 AHNAKQ09666 5890 aaKnown RBP3.65□□□□□ -1.82
CKAP4-202ENST00000552828 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.83
CKAP4-202ENST00000552828 MUC5BQ9HC84 5762 aaPredicted RBP3.62□□□□□ -1.83
CKAP4-202ENST00000552828 MUC5ACP98088 5654 aa3.6□□□□□ -1.83
CKAP4-202ENST00000552828 MT3P25713 68 aa3.59□□□□□ -1.83
CKAP4-202ENST00000552828 KRTAP5-8O75690 187 aa3.58□□□□□ -1.84
CKAP4-202ENST00000552828 MT1AP04731 61 aa3.56□□□□□ -1.84
CKAP4-202ENST00000552828 KRTAP9-6A8MVA2 160 aa3.55□□□□□ -1.84
CKAP4-202ENST00000552828 KRTAP6-1Q3LI64 71 aa3.55□□□□□ -1.84
CKAP4-202ENST00000552828 INE1O15225 51 aa3.5□□□□□ -1.85
CKAP4-202ENST00000552828 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
CKAP4-202ENST00000552828 KRTAP6-2Q3LI66 62 aa3.44□□□□□ -1.86
CKAP4-202ENST00000552828 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
CKAP4-202ENST00000552828 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
CKAP4-202ENST00000552828 KRTAP4-2Q9BYR5 136 aa3.19□□□□□ -1.9
CKAP4-202ENST00000552828 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
CKAP4-202ENST00000552828 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
CKAP4-202ENST00000552828 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
CKAP4-202ENST00000552828 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
CKAP4-202ENST00000552828 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
CKAP4-202ENST00000552828 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
CKAP4-202ENST00000552828 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -1.99
CKAP4-202ENST00000552828 PRM1P04553 51 aa2.49□□□□□ -2.01
CKAP4-202ENST00000552828 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
CKAP4-202ENST00000552828 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
CKAP4-202ENST00000552828 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
CKAP4-202ENST00000552828 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
CKAP4-202ENST00000552828 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
CKAP4-202ENST00000552828 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 112.8 ms