RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 SNURFQ9Y675 71 aa0.78□□□□□ -2.28
CPSF6-207ENST00000551516 NREPQ16612 68 aa0.77□□□□□ -2.29
CPSF6-207ENST00000551516 CASC2Q6XLA1 102 aa0.77□□□□□ -2.29
CPSF6-207ENST00000551516 VPS25Q9BRG1 176 aa0.77□□□□□ -2.29
CPSF6-207ENST00000551516 DNAL4O96015 105 aa0.76□□□□□ -2.29
CPSF6-207ENST00000551516 K7EP34 96 aa0.75□□□□□ -2.29
CPSF6-207ENST00000551516 SNCGO76070 127 aa0.75□□□□□ -2.29
CPSF6-207ENST00000551516 PLAC4Q8WY50 150 aa0.75□□□□□ -2.29
CPSF6-207ENST00000551516 VAMP8Q9BV40 100 aa0.75□□□□□ -2.29
CPSF6-207ENST00000551516 TAX1BP3O14907 124 aa0.74□□□□□ -2.29
CPSF6-207ENST00000551516 COX6CP09669 75 aa0.74□□□□□ -2.29
CPSF6-207ENST00000551516 M0QZ58 72 aa0.73□□□□□ -2.29
CPSF6-207ENST00000551516 NDUFC1O43677 76 aa0.73□□□□□ -2.29
CPSF6-207ENST00000551516 ATXN8Q156A1 80 aa0.73□□□□□ -2.29
CPSF6-207ENST00000551516 TP53AIP1Q9HCN2 124 aa0.73□□□□□ -2.29
CPSF6-207ENST00000551516 UQCR10Q9UDW1 63 aa0.73□□□□□ -2.29
CPSF6-207ENST00000551516 LOC101927531A0A1B0GV80 90 aa0.72□□□□□ -2.29
CPSF6-207ENST00000551516 MUC19Q7Z5P9 8384 aa0.72□□□□□ -2.29
CPSF6-207ENST00000551516 TRAV22A0A0B4J277 110 aa0.71□□□□□ -2.3
CPSF6-207ENST00000551516 DMAC1Q96GE9 116 aa0.71□□□□□ -2.3
CPSF6-207ENST00000551516 A0A0D9SG42 100 aa0.7□□□□□ -2.3
CPSF6-207ENST00000551516 A0A1W2PPM0 123 aa0.7□□□□□ -2.3
CPSF6-207ENST00000551516 KRTAP6-1Q3LI64 71 aa0.7□□□□□ -2.3
CPSF6-207ENST00000551516 SMIM20Q8N5G0 67 aa0.7□□□□□ -2.3
CPSF6-207ENST00000551516 CDC42SE1Q9NRR8 79 aa0.7□□□□□ -2.3
CPSF6-207ENST00000551516 S100A1P23297 94 aa0.69□□□□□ -2.3
CPSF6-207ENST00000551516 C10orf95Q9H7T3 257 aa0.69□□□□□ -2.3
CPSF6-207ENST00000551516 UQCRQO14949 82 aa0.68□□□□□ -2.3
CPSF6-207ENST00000551516 INE1O15225 51 aa0.68□□□□□ -2.3
CPSF6-207ENST00000551516 MT1AP04731 61 aa0.67□□□□□ -2.3
CPSF6-207ENST00000551516 ACYP1P07311 99 aa0.67□□□□□ -2.3
CPSF6-207ENST00000551516 ROMO1P60602 79 aa0.67□□□□□ -2.3
CPSF6-207ENST00000551516 KRTAP21-2Q3LI59 83 aa0.67□□□□□ -2.3
CPSF6-207ENST00000551516 SPCS1Q9Y6A9 102 aa0.67□□□□□ -2.3
CPSF6-207ENST00000551516 H0Y9P7 68 aa0.66□□□□□ -2.3
CPSF6-207ENST00000551516 M0R143 59 aa0.66□□□□□ -2.3
CPSF6-207ENST00000551516 C20orf197Q8N268 126 aa0.66□□□□□ -2.3
CPSF6-207ENST00000551516 UBL5Q9BZL1 73 aa0.66□□□□□ -2.3
CPSF6-207ENST00000551516 ATOX1O00244 68 aa0.65□□□□□ -2.31
CPSF6-207ENST00000551516 KRTAP6-2Q3LI66 62 aa0.65□□□□□ -2.31
CPSF6-207ENST00000551516 LOC105371267A0A1B0GV96 52 aa0.64□□□□□ -2.31
CPSF6-207ENST00000551516 F8W1H4 67 aa0.64□□□□□ -2.31
CPSF6-207ENST00000551516 COX7CP15954 63 aa0.64□□□□□ -2.31
CPSF6-207ENST00000551516 ETDBQ3ZM63 59 aa0.64□□□□□ -2.31
CPSF6-207ENST00000551516 LINC00208Q96KT6 92 aa0.64□□□□□ -2.31
CPSF6-207ENST00000551516 SMIM6P0DI80 62 aa0.63□□□□□ -2.31
CPSF6-207ENST00000551516 ATP5EP2Q5VTU8 51 aa0.61□□□□□ -2.31
CPSF6-207ENST00000551516 SPATA8Q6RVD6 105 aa0.61□□□□□ -2.31
CPSF6-207ENST00000551516 TSTD3H0UI37 97 aa0.6□□□□□ -2.31
CPSF6-207ENST00000551516 MT-ATP8P03928 68 aa0.59□□□□□ -2.31
CPSF6-207ENST00000551516 LINC00643Q86TS7 51 aa0.59□□□□□ -2.31
CPSF6-207ENST00000551516 ACYP2P14621 99 aa0.58□□□□□ -2.32
CPSF6-207ENST00000551516 MIR22HGQ0VDD5 57 aa0.58□□□□□ -2.32
CPSF6-207ENST00000551516 COL5A1-AS1Q5SY13 56 aa0.58□□□□□ -2.32
CPSF6-207ENST00000551516 TNP1P09430 55 aa0.56□□□□□ -2.32
CPSF6-207ENST00000551516 BRK1Q8WUW1 75 aa0.55□□□□□ -2.32
CPSF6-207ENST00000551516 GTF2H5Q6ZYL4 71 aa0.53□□□□□ -2.32
CPSF6-207ENST00000551516 SPTSSBQ8NFR3 76 aa0.53□□□□□ -2.32
CPSF6-207ENST00000551516 RPS28P62857 69 aaKnown RBP0.52□□□□□ -2.33
CPSF6-207ENST00000551516 H7BZZ5 65 aa0.5□□□□□ -2.33
CPSF6-207ENST00000551516 SCGB1A1P11684 91 aa0.49□□□□□ -2.33
CPSF6-207ENST00000551516 CHKB-CPT1BH3BT56 60 aa0.48□□□□□ -2.33
CPSF6-207ENST00000551516 A0A1B0GV90 55 aa0.47□□□□□ -2.33
CPSF6-207ENST00000551516 PHGR1C9JFL3 82 aa0.47□□□□□ -2.33
CPSF6-207ENST00000551516 SERP2Q8N6R1 65 aa0.47□□□□□ -2.33
CPSF6-207ENST00000551516 SERP1Q9Y6X1 66 aa0.46□□□□□ -2.34
CPSF6-207ENST00000551516 LINC01558Q9Y6Z2 57 aa0.45□□□□□ -2.34
CPSF6-207ENST00000551516 A0A1B0GU69 56 aa0.43□□□□□ -2.34
CPSF6-207ENST00000551516 J3QR89 54 aa0.41□□□□□ -2.34
CPSF6-207ENST00000551516 CCDC179H3BU77 68 aa0.4□□□□□ -2.35
CPSF6-207ENST00000551516 UQCR11O14957 56 aa0.38□□□□□ -2.35
CPSF6-207ENST00000551516 K7ERU9 68 aa0.37□□□□□ -2.35
CPSF6-207ENST00000551516 KRTAP21-1Q3LI58 79 aa0.37□□□□□ -2.35
CPSF6-207ENST00000551516 PRR15LQ9BU68 103 aa0.37□□□□□ -2.35
CPSF6-207ENST00000551516 MUC16Q8WXI7 14507 aa0.36□□□□□ -2.35
CPSF6-207ENST00000551516 ATP5EP56381 51 aaPredicted RBP0.3□□□□□ -2.36
CPSF6-207ENST00000551516 PRM1P04553 51 aa0.17□□□□□ -2.38
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms