RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 AHNAK2Q8IVF2 5795 aa4.08□□□□□ -1.76
PRPF40B-212ENST00000551111 PP632Q6XCG6 107 aa4.07□□□□□ -1.76
PRPF40B-212ENST00000551111 COA5Q86WW8 74 aa4.06□□□□□ -1.76
PRPF40B-212ENST00000551111 KRTAP5-4Q6L8H1 288 aa4.05□□□□□ -1.76
PRPF40B-212ENST00000551111 KRTAP5-10Q6L8G5 202 aa4.03□□□□□ -1.76
PRPF40B-212ENST00000551111 A0A1B0GU33 70 aa4.01□□□□□ -1.77
PRPF40B-212ENST00000551111 C10orf95Q9H7T3 257 aa4.01□□□□□ -1.77
PRPF40B-212ENST00000551111 LCE3AQ5TA76 89 aa4□□□□□ -1.77
PRPF40B-212ENST00000551111 SERP2Q8N6R1 65 aa4□□□□□ -1.77
PRPF40B-212ENST00000551111 SERP1Q9Y6X1 66 aa4□□□□□ -1.77
PRPF40B-212ENST00000551111 K7ERU9 68 aa3.99□□□□□ -1.77
PRPF40B-212ENST00000551111 SEC61GP60059 68 aa3.98□□□□□ -1.77
PRPF40B-212ENST00000551111 A8MU10 97 aa3.95□□□□□ -1.78
PRPF40B-212ENST00000551111 KRTAP5-7Q6L8G8 165 aa3.87□□□□□ -1.79
PRPF40B-212ENST00000551111 TNP1P09430 55 aa3.86□□□□□ -1.79
PRPF40B-212ENST00000551111 SMIM26A0A096LP01 95 aa3.85□□□□□ -1.79
PRPF40B-212ENST00000551111 H7BZZ5 65 aa3.85□□□□□ -1.79
PRPF40B-212ENST00000551111 KRTAP20-2Q3LI61 65 aa3.84□□□□□ -1.79
PRPF40B-212ENST00000551111 A0A1B0GU69 56 aa3.82□□□□□ -1.8
PRPF40B-212ENST00000551111 COX7CP15954 63 aa3.82□□□□□ -1.8
PRPF40B-212ENST00000551111 KRTAP12-3P60328 96 aa3.81□□□□□ -1.8
PRPF40B-212ENST00000551111 KRTAP5-5Q701N2 237 aaPredicted RBP3.81□□□□□ -1.8
PRPF40B-212ENST00000551111 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
PRPF40B-212ENST00000551111 SPRR5A0A1B0GTR4 108 aa3.74□□□□□ -1.81
PRPF40B-212ENST00000551111 KRTAP12-4P60329 112 aa3.69□□□□□ -1.82
PRPF40B-212ENST00000551111 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.65□□□□□ -1.83
PRPF40B-212ENST00000551111 LINC01558Q9Y6Z2 57 aa3.59□□□□□ -1.83
PRPF40B-212ENST00000551111 PRR15LQ9BU68 103 aa3.58□□□□□ -1.84
PRPF40B-212ENST00000551111 CCDC179H3BU77 68 aa3.57□□□□□ -1.84
PRPF40B-212ENST00000551111 ANAPC13Q9BS18 74 aa3.55□□□□□ -1.84
PRPF40B-212ENST00000551111 KRTAP25-1Q3LHN0 102 aa3.53□□□□□ -1.84
PRPF40B-212ENST00000551111 KRTAP5-2Q701N4 177 aa3.52□□□□□ -1.85
PRPF40B-212ENST00000551111 KRTAP6-1Q3LI64 71 aa3.51□□□□□ -1.85
PRPF40B-212ENST00000551111 UQCR11O14957 56 aa3.5□□□□□ -1.85
PRPF40B-212ENST00000551111 LCE3CQ5T5A8 94 aa3.49□□□□□ -1.85
PRPF40B-212ENST00000551111 MT1AP04731 61 aa3.46□□□□□ -1.86
PRPF40B-212ENST00000551111 KRTAP5-8O75690 187 aa3.45□□□□□ -1.86
PRPF40B-212ENST00000551111 ATP5EP56381 51 aaPredicted RBP3.45□□□□□ -1.86
PRPF40B-212ENST00000551111 PRAC1Q96KF2 57 aa3.45□□□□□ -1.86
PRPF40B-212ENST00000551111 MT3P25713 68 aa3.44□□□□□ -1.86
PRPF40B-212ENST00000551111 MIR22HGQ0VDD5 57 aa3.43□□□□□ -1.86
PRPF40B-212ENST00000551111 KRTAP9-6A8MVA2 160 aa3.39□□□□□ -1.87
PRPF40B-212ENST00000551111 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
PRPF40B-212ENST00000551111 KRTAP6-2Q3LI66 62 aa3.37□□□□□ -1.87
PRPF40B-212ENST00000551111 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
PRPF40B-212ENST00000551111 MUC5BQ9HC84 5762 aaPredicted RBP3.35□□□□□ -1.87
PRPF40B-212ENST00000551111 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.87
PRPF40B-212ENST00000551111 TMEM258P61165 79 aa3.32□□□□□ -1.88
PRPF40B-212ENST00000551111 K7ERS5 55 aa3.31□□□□□ -1.88
PRPF40B-212ENST00000551111 PSPHP1O15172 72 aa3.29□□□□□ -1.88
PRPF40B-212ENST00000551111 NDUFAF8A1L188 74 aa3.27□□□□□ -1.89
PRPF40B-212ENST00000551111 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
PRPF40B-212ENST00000551111 Q1T7F1 81 aa3.2□□□□□ -1.9
PRPF40B-212ENST00000551111 KRTAP5-1Q6L8H4 278 aa3.2□□□□□ -1.9
PRPF40B-212ENST00000551111 CDC42SE1Q9NRR8 79 aa3.16□□□□□ -1.9
PRPF40B-212ENST00000551111 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
PRPF40B-212ENST00000551111 RPS28P62857 69 aaKnown RBP3.14□□□□□ -1.91
PRPF40B-212ENST00000551111 V9GYY9 64 aa3.14□□□□□ -1.91
PRPF40B-212ENST00000551111 ROMO1P60602 79 aa3.12□□□□□ -1.91
PRPF40B-212ENST00000551111 A6NED7 52 aa3.11□□□□□ -1.91
PRPF40B-212ENST00000551111 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
PRPF40B-212ENST00000551111 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
PRPF40B-212ENST00000551111 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
PRPF40B-212ENST00000551111 PRO0628Q9UI54 55 aa2.74□□□□□ -1.97
PRPF40B-212ENST00000551111 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
PRPF40B-212ENST00000551111 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
PRPF40B-212ENST00000551111 PMAIP1Q13794 54 aa2.63□□□□□ -1.99
PRPF40B-212ENST00000551111 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.02
PRPF40B-212ENST00000551111 KTN1-AS1Q86SY8 53 aa2.45□□□□□ -2.02
PRPF40B-212ENST00000551111 BRK1Q8WUW1 75 aa2.41□□□□□ -2.02
PRPF40B-212ENST00000551111 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
PRPF40B-212ENST00000551111 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
PRPF40B-212ENST00000551111 LUZP6Q538Z0 58 aa2.29□□□□□ -2.04
PRPF40B-212ENST00000551111 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
PRPF40B-212ENST00000551111 INE1O15225 51 aa1.78□□□□□ -2.12
PRPF40B-212ENST00000551111 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
PRPF40B-212ENST00000551111 PRM1P04553 51 aa1.63□□□□□ -2.15
PRPF40B-212ENST00000551111 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 63.4 ms