RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 RPS28P62857 69 aaKnown RBP4.76□□□□□ -1.65
NPAS3-209ENST00000551008 DSTQ03001 7570 aaKnown RBP4.76□□□□□ -1.65
NPAS3-209ENST00000551008 A8MU10 97 aa4.74□□□□□ -1.65
NPAS3-209ENST00000551008 A0A1B0GU69 56 aa4.7□□□□□ -1.66
NPAS3-209ENST00000551008 MT1GP13640 62 aa4.67□□□□□ -1.66
NPAS3-209ENST00000551008 SMIM26A0A096LP01 95 aa4.66□□□□□ -1.66
NPAS3-209ENST00000551008 MT1LQ93083 61 aa4.66□□□□□ -1.66
NPAS3-209ENST00000551008 C10orf95Q9H7T3 257 aa4.66□□□□□ -1.66
NPAS3-209ENST00000551008 A0A0A0MQY5 61 aa4.65□□□□□ -1.67
NPAS3-209ENST00000551008 LCE3AQ5TA76 89 aa4.64□□□□□ -1.67
NPAS3-209ENST00000551008 MT1MQ8N339 61 aa4.64□□□□□ -1.67
NPAS3-209ENST00000551008 TMEM258P61165 79 aa4.61□□□□□ -1.67
NPAS3-209ENST00000551008 KRTAP4-3Q9BYR4 195 aa4.58□□□□□ -1.68
NPAS3-209ENST00000551008 PP632Q6XCG6 107 aa4.57□□□□□ -1.68
NPAS3-209ENST00000551008 TNP1P09430 55 aa4.55□□□□□ -1.68
NPAS3-209ENST00000551008 ATP5EP56381 51 aaPredicted RBP4.54□□□□□ -1.68
NPAS3-209ENST00000551008 LINC01558Q9Y6Z2 57 aa4.54□□□□□ -1.68
NPAS3-209ENST00000551008 PRO0628Q9UI54 55 aa4.51□□□□□ -1.69
NPAS3-209ENST00000551008 GPR98Q8WXG9 6306 aa4.49□□□□□ -1.69
NPAS3-209ENST00000551008 KRTAP5-4Q6L8H1 288 aa4.48□□□□□ -1.69
NPAS3-209ENST00000551008 PRR15LQ9BU68 103 aa4.48□□□□□ -1.69
NPAS3-209ENST00000551008 MT3P25713 68 aa4.47□□□□□ -1.69
NPAS3-209ENST00000551008 MT4P47944 62 aa4.46□□□□□ -1.7
NPAS3-209ENST00000551008 HMCN1Q96RW7 5635 aa4.45□□□□□ -1.7
NPAS3-209ENST00000551008 KRTAP12-3P60328 96 aa4.42□□□□□ -1.7
NPAS3-209ENST00000551008 V9GYY9 64 aa4.39□□□□□ -1.71
NPAS3-209ENST00000551008 UQCR11O14957 56 aa4.38□□□□□ -1.71
NPAS3-209ENST00000551008 AHNAK2Q8IVF2 5795 aa4.34□□□□□ -1.71
NPAS3-209ENST00000551008 KRTAP5-5Q701N2 237 aaPredicted RBP4.3□□□□□ -1.72
NPAS3-209ENST00000551008 MIR22HGQ0VDD5 57 aa4.29□□□□□ -1.72
NPAS3-209ENST00000551008 BRK1Q8WUW1 75 aa4.29□□□□□ -1.72
NPAS3-209ENST00000551008 KRTAP25-1Q3LHN0 102 aa4.28□□□□□ -1.72
NPAS3-209ENST00000551008 PMAIP1Q13794 54 aa4.27□□□□□ -1.73
NPAS3-209ENST00000551008 KRTAP5-10Q6L8G5 202 aa4.27□□□□□ -1.73
NPAS3-209ENST00000551008 Q1T7F1 81 aa4.25□□□□□ -1.73
NPAS3-209ENST00000551008 PSPHP1O15172 72 aa4.21□□□□□ -1.74
NPAS3-209ENST00000551008 KRTAP20-2Q3LI61 65 aa4.21□□□□□ -1.74
NPAS3-209ENST00000551008 SPRR5A0A1B0GTR4 108 aa4.15□□□□□ -1.75
NPAS3-209ENST00000551008 K7ERS5 55 aa4.12□□□□□ -1.75
NPAS3-209ENST00000551008 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
NPAS3-209ENST00000551008 KRTAP5-7Q6L8G8 165 aa4.09□□□□□ -1.75
NPAS3-209ENST00000551008 KTN1-AS1Q86SY8 53 aa4.09□□□□□ -1.75
NPAS3-209ENST00000551008 SYNE1Q8NF91 8797 aaKnown RBP4.08□□□□□ -1.76
NPAS3-209ENST00000551008 KRTAP12-4P60329 112 aa4.07□□□□□ -1.76
NPAS3-209ENST00000551008 LCE3CQ5T5A8 94 aa4.07□□□□□ -1.76
NPAS3-209ENST00000551008 KRTAP5-11Q6L8G4 156 aa4.06□□□□□ -1.76
NPAS3-209ENST00000551008 A6NED7 52 aa4.01□□□□□ -1.77
NPAS3-209ENST00000551008 CDC42SE1Q9NRR8 79 aa4□□□□□ -1.77
NPAS3-209ENST00000551008 NDUFAF8A1L188 74 aa3.95□□□□□ -1.78
NPAS3-209ENST00000551008 KRTAP9-6A8MVA2 160 aa3.95□□□□□ -1.78
NPAS3-209ENST00000551008 KRTAP6-1Q3LI64 71 aa3.95□□□□□ -1.78
NPAS3-209ENST00000551008 MT1AP04731 61 aa3.94□□□□□ -1.78
NPAS3-209ENST00000551008 ROMO1P60602 79 aa3.93□□□□□ -1.78
NPAS3-209ENST00000551008 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
NPAS3-209ENST00000551008 KRTAP5-2Q701N4 177 aa3.93□□□□□ -1.78
NPAS3-209ENST00000551008 PRAC1Q96KF2 57 aa3.89□□□□□ -1.79
NPAS3-209ENST00000551008 LCE1FQ5T754 118 aa3.87□□□□□ -1.79
NPAS3-209ENST00000551008 KRTAP6-2Q3LI66 62 aa3.76□□□□□ -1.81
NPAS3-209ENST00000551008 KRTAP5-8O75690 187 aa3.74□□□□□ -1.81
NPAS3-209ENST00000551008 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
NPAS3-209ENST00000551008 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
NPAS3-209ENST00000551008 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
NPAS3-209ENST00000551008 MUC5BQ9HC84 5762 aaPredicted RBP3.53□□□□□ -1.85
NPAS3-209ENST00000551008 AHNAKQ09666 5890 aaKnown RBP3.52□□□□□ -1.85
NPAS3-209ENST00000551008 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
NPAS3-209ENST00000551008 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
NPAS3-209ENST00000551008 LUZP6Q538Z0 58 aa3.13□□□□□ -1.91
NPAS3-209ENST00000551008 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
NPAS3-209ENST00000551008 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
NPAS3-209ENST00000551008 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
NPAS3-209ENST00000551008 INE1O15225 51 aa2.8□□□□□ -1.96
NPAS3-209ENST00000551008 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
NPAS3-209ENST00000551008 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
NPAS3-209ENST00000551008 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
NPAS3-209ENST00000551008 PRM1P04553 51 aa2.03□□□□□ -2.08
NPAS3-209ENST00000551008 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
NPAS3-209ENST00000551008 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 96 ms