RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 COX7BP24311 80 aa2.05□□□□□ -2.08
CPSF6-206ENST00000550987 KRTAP12-4P60329 112 aa2.05□□□□□ -2.08
CPSF6-206ENST00000550987 Q6ZRX8 168 aa2.05□□□□□ -2.08
CPSF6-206ENST00000550987 SMIM27A0A1W2PRY6 76 aa2.04□□□□□ -2.08
CPSF6-206ENST00000550987 UNQ6190/PRO20217Q6UXQ8 127 aa2.04□□□□□ -2.08
CPSF6-206ENST00000550987 LINC00959A0A1B0GUT2 108 aa2.03□□□□□ -2.08
CPSF6-206ENST00000550987 MT2AP02795 61 aa2.03□□□□□ -2.08
CPSF6-206ENST00000550987 ARL14EPLP0DKL9 152 aa2.03□□□□□ -2.08
CPSF6-206ENST00000550987 MT1FP04733 61 aa2.02□□□□□ -2.09
CPSF6-206ENST00000550987 KCNQ1DNQ9H478 68 aa2.02□□□□□ -2.09
CPSF6-206ENST00000550987 KRTAP4-3Q9BYR4 195 aa2.01□□□□□ -2.09
CPSF6-206ENST00000550987 ETDCA0A1B0GVM5 59 aa2□□□□□ -2.09
CPSF6-206ENST00000550987 TMEM167BQ9NRX6 74 aa2□□□□□ -2.09
CPSF6-206ENST00000550987 LINC01546A6NGU7 62 aa1.99□□□□□ -2.09
CPSF6-206ENST00000550987 IGIPA6NJ69 53 aa1.99□□□□□ -2.09
CPSF6-206ENST00000550987 SSBP3-AS1Q7Z2R9 100 aa1.99□□□□□ -2.09
CPSF6-206ENST00000550987 C6orf48Q9UBA6 75 aa1.98□□□□□ -2.09
CPSF6-206ENST00000550987 H0YGX0 51 aa1.97□□□□□ -2.09
CPSF6-206ENST00000550987 I3L3M4 83 aa1.97□□□□□ -2.09
CPSF6-206ENST00000550987 NDUFA1O15239 70 aa1.97□□□□□ -2.09
CPSF6-206ENST00000550987 KRTAP5-2Q701N4 177 aa1.97□□□□□ -2.09
CPSF6-206ENST00000550987 RPL39LQ96EH5 51 aaKnown RBP1.97□□□□□ -2.09
CPSF6-206ENST00000550987 RPL37P61927 97 aaKnown RBP1.96□□□□□ -2.1
CPSF6-206ENST00000550987 COX6B2Q6YFQ2 88 aa1.95□□□□□ -2.1
CPSF6-206ENST00000550987 POLR2KP53803 58 aaKnown RBP1.93□□□□□ -2.1
CPSF6-206ENST00000550987 SPINK1P00995 79 aa1.92□□□□□ -2.1
CPSF6-206ENST00000550987 PRLHP81277 87 aa1.92□□□□□ -2.1
CPSF6-206ENST00000550987 CNFNQ9BYD5 112 aa1.92□□□□□ -2.1
CPSF6-206ENST00000550987 KRTAP5-8O75690 187 aa1.91□□□□□ -2.1
CPSF6-206ENST00000550987 RPL39P62891 51 aaKnown RBP1.9□□□□□ -2.11
CPSF6-206ENST00000550987 C9orf92A6NGG3 77 aa1.89□□□□□ -2.11
CPSF6-206ENST00000550987 CRIPTQ9P021 101 aa1.89□□□□□ -2.11
CPSF6-206ENST00000550987 TOMM7Q9P0U1 55 aa1.89□□□□□ -2.11
CPSF6-206ENST00000550987 RPS29P62273 56 aaKnown RBP1.87□□□□□ -2.11
CPSF6-206ENST00000550987 Q8IZM0 81 aa1.86□□□□□ -2.11
CPSF6-206ENST00000550987 K7EQZ3 153 aa1.84□□□□□ -2.11
CPSF6-206ENST00000550987 CDKN2A-AS1Q9UH64 79 aa1.84□□□□□ -2.11
CPSF6-206ENST00000550987 TP53AIP1Q9HCN2 124 aa1.83□□□□□ -2.12
CPSF6-206ENST00000550987 LINC00158P58513 81 aa1.82□□□□□ -2.12
CPSF6-206ENST00000550987 SMIM2Q9BVW6 85 aa1.82□□□□□ -2.12
CPSF6-206ENST00000550987 SPRR1AP35321 89 aa1.8□□□□□ -2.12
CPSF6-206ENST00000550987 MRPL34Q9BQ48 92 aaKnown RBP1.8□□□□□ -2.12
CPSF6-206ENST00000550987 LINC00308Q8TCZ7 52 aa1.78□□□□□ -2.12
CPSF6-206ENST00000550987 KRTAP8-1Q8IUC2 63 aa1.77□□□□□ -2.13
CPSF6-206ENST00000550987 SYNE1Q8NF91 8797 aaKnown RBP1.74□□□□□ -2.13
CPSF6-206ENST00000550987 SPRR1BP22528 89 aa1.73□□□□□ -2.13
CPSF6-206ENST00000550987 DEFB105AQ8NG35 78 aa1.7□□□□□ -2.14
CPSF6-206ENST00000550987 KRTAP20-2Q3LI61 65 aa1.69□□□□□ -2.14
CPSF6-206ENST00000550987 C10orf95Q9H7T3 257 aa1.68□□□□□ -2.14
CPSF6-206ENST00000550987 H0YAA0 97 aa1.67□□□□□ -2.14
CPSF6-206ENST00000550987 MT1BP07438 61 aa1.65□□□□□ -2.15
CPSF6-206ENST00000550987 IGLV5-48A0A075B6I7 105 aa1.64□□□□□ -2.15
CPSF6-206ENST00000550987 MUC19Q7Z5P9 8384 aa1.64□□□□□ -2.15
CPSF6-206ENST00000550987 KRTAP19-8Q3LI54 63 aa1.6□□□□□ -2.15
CPSF6-206ENST00000550987 H1FX-AS1Q4G0G2 97 aa1.6□□□□□ -2.15
CPSF6-206ENST00000550987 WFDC13Q8IUB5 93 aa1.6□□□□□ -2.15
CPSF6-206ENST00000550987 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
CPSF6-206ENST00000550987 SPRR2GQ9BYE4 73 aa1.57□□□□□ -2.16
CPSF6-206ENST00000550987 A0A0D9SG42 100 aa1.53□□□□□ -2.16
CPSF6-206ENST00000550987 MT1XP80297 61 aa1.49□□□□□ -2.17
CPSF6-206ENST00000550987 MMP24-AS1A0A0U1RRL7 71 aa1.47□□□□□ -2.17
CPSF6-206ENST00000550987 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
CPSF6-206ENST00000550987 S4R3F8 94 aa1.43□□□□□ -2.18
CPSF6-206ENST00000550987 KRTAP19-3Q7Z4W3 81 aa1.37□□□□□ -2.19
CPSF6-206ENST00000550987 MT1EP04732 61 aa1.33□□□□□ -2.2
CPSF6-206ENST00000550987 KRTAP19-7Q3SYF9 63 aa1.33□□□□□ -2.2
CPSF6-206ENST00000550987 MT1GP13640 62 aa1.31□□□□□ -2.2
CPSF6-206ENST00000550987 M0QZ58 72 aa1.28□□□□□ -2.2
CPSF6-206ENST00000550987 MT1MQ8N339 61 aa1.28□□□□□ -2.2
CPSF6-206ENST00000550987 KRTAP19-5Q3LI72 72 aa1.24□□□□□ -2.21
CPSF6-206ENST00000550987 MT1LQ93083 61 aa1.24□□□□□ -2.21
CPSF6-206ENST00000550987 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
CPSF6-206ENST00000550987 TNP1P09430 55 aa1.13□□□□□ -2.23
CPSF6-206ENST00000550987 KRTAP6-1Q3LI64 71 aa1.07□□□□□ -2.24
CPSF6-206ENST00000550987 KRTAP6-2Q3LI66 62 aa1.06□□□□□ -2.24
CPSF6-206ENST00000550987 MT1AP04731 61 aa1.03□□□□□ -2.24
CPSF6-206ENST00000550987 PRM1P04553 51 aa0.98□□□□□ -2.25
CPSF6-206ENST00000550987 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 74.6 ms