RNA–Protein interactions for RNA: ENST00000550678.1

LINC02388-201, Transcript of long intergenic non-protein coding RNA 2388, humanhuman

TSL 2 BASIC

Gene LINC02388, Length 1,975 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02388-201ENST00000550678 MT1HL1P0DM35 61 aa2.44□□□□□ -2.02
LINC02388-201ENST00000550678 LCE3AQ5TA76 89 aa2.43□□□□□ -2.02
LINC02388-201ENST00000550678 KRTAP12-4P60329 112 aa2.41□□□□□ -2.02
LINC02388-201ENST00000550678 MUC17Q685J3 4493 aa2.39□□□□□ -2.03
LINC02388-201ENST00000550678 KRTAP8-1Q8IUC2 63 aa2.38□□□□□ -2.03
LINC02388-201ENST00000550678 HMCN2Q8NDA2 5059 aa2.38□□□□□ -2.03
LINC02388-201ENST00000550678 KRTAP19-2Q3LHN2 52 aa2.38□□□□□ -2.03
LINC02388-201ENST00000550678 UBR4Q5T4S7 5183 aa2.37□□□□□ -2.03
LINC02388-201ENST00000550678 KRTAP4-1Q9BYQ7 146 aa2.36□□□□□ -2.03
LINC02388-201ENST00000550678 KRTAP12-3P60328 96 aa2.3□□□□□ -2.04
LINC02388-201ENST00000550678 RNF213Q63HN8 5207 aa2.29□□□□□ -2.04
LINC02388-201ENST00000550678 SPRR2GQ9BYE4 73 aa2.29□□□□□ -2.04
LINC02388-201ENST00000550678 MUC2Q02817 5179 aa2.28□□□□□ -2.04
LINC02388-201ENST00000550678 KRTAP10-5P60370 271 aa2.27□□□□□ -2.05
LINC02388-201ENST00000550678 LCE3DQ9BYE3 92 aa2.25□□□□□ -2.05
LINC02388-201ENST00000550678 KRTAP4-3Q9BYR4 195 aa2.23□□□□□ -2.05
LINC02388-201ENST00000550678 FAT4Q6V0I7 4981 aa2.21□□□□□ -2.06
LINC02388-201ENST00000550678 KRTAP2-3P0C7H8 128 aa2.21□□□□□ -2.06
LINC02388-201ENST00000550678 KRTAP2-4Q9BYR9 128 aa2.21□□□□□ -2.06
LINC02388-201ENST00000550678 KRTAP2-1Q9BYU5 128 aa2.21□□□□□ -2.06
LINC02388-201ENST00000550678 MT1XP80297 61 aa2.15□□□□□ -2.07
LINC02388-201ENST00000550678 KRTAP9-6A8MVA2 160 aa2.14□□□□□ -2.07
LINC02388-201ENST00000550678 KRTAP19-8Q3LI54 63 aa2.14□□□□□ -2.07
LINC02388-201ENST00000550678 M0R2T5 61 aa2.12□□□□□ -2.07
LINC02388-201ENST00000550678 KRTAP19-5Q3LI72 72 aa2.1□□□□□ -2.07
LINC02388-201ENST00000550678 MT1BP07438 61 aa2.09□□□□□ -2.08
LINC02388-201ENST00000550678 MT1HP80294 61 aa2.09□□□□□ -2.08
LINC02388-201ENST00000550678 CRCT1Q9UGL9 99 aa2.09□□□□□ -2.08
LINC02388-201ENST00000550678 MT1FP04733 61 aa2.07□□□□□ -2.08
LINC02388-201ENST00000550678 MT2AP02795 61 aa2.06□□□□□ -2.08
LINC02388-201ENST00000550678 OBSCNQ5VST9 7968 aa2.05□□□□□ -2.08
LINC02388-201ENST00000550678 FSIP2Q5CZC0 6907 aa2.01□□□□□ -2.09
LINC02388-201ENST00000550678 USH2AO75445 5202 aa1.96□□□□□ -2.1
LINC02388-201ENST00000550678 GPR98Q8WXG9 6306 aa1.95□□□□□ -2.1
LINC02388-201ENST00000550678 PRM1P04553 51 aa1.92□□□□□ -2.1
LINC02388-201ENST00000550678 KRTAP19-7Q3SYF9 63 aa1.91□□□□□ -2.1
LINC02388-201ENST00000550678 SSPOA2VEC9 5147 aa1.9□□□□□ -2.11
LINC02388-201ENST00000550678 MT1LQ93083 61 aa1.89□□□□□ -2.11
LINC02388-201ENST00000550678 KRTAP19-6Q3LI70 58 aa1.89□□□□□ -2.11
LINC02388-201ENST00000550678 MT1EP04732 61 aa1.85□□□□□ -2.11
LINC02388-201ENST00000550678 KMT2DO14686 5537 aa1.82□□□□□ -2.12
LINC02388-201ENST00000550678 FCGBPQ9Y6R7 5405 aaPredicted RBP1.8□□□□□ -2.12
LINC02388-201ENST00000550678 MACF1Q9UPN3 7388 aaKnown RBP1.79□□□□□ -2.12
LINC02388-201ENST00000550678 MT1AP04731 61 aa1.79□□□□□ -2.12
LINC02388-201ENST00000550678 MT1GP13640 62 aa1.79□□□□□ -2.12
LINC02388-201ENST00000550678 KRTAP5-5Q701N2 237 aaPredicted RBP1.79□□□□□ -2.12
LINC02388-201ENST00000550678 SYNE2Q8WXH0 6885 aaKnown RBP1.77□□□□□ -2.13
LINC02388-201ENST00000550678 NEBP20929 6669 aa1.74□□□□□ -2.13
LINC02388-201ENST00000550678 KRTAP20-1Q3LI63 56 aa1.72□□□□□ -2.13
LINC02388-201ENST00000550678 MT1MQ8N339 61 aa1.69□□□□□ -2.14
LINC02388-201ENST00000550678 SYNE1Q8NF91 8797 aaKnown RBP1.67□□□□□ -2.14
LINC02388-201ENST00000550678 LCE1CQ5T751 118 aa1.67□□□□□ -2.14
LINC02388-201ENST00000550678 LCE1BQ5T7P3 118 aa1.67□□□□□ -2.14
LINC02388-201ENST00000550678 KRTAP6-2Q3LI66 62 aa1.67□□□□□ -2.14
LINC02388-201ENST00000550678 KRTAP19-3Q7Z4W3 81 aa1.64□□□□□ -2.15
LINC02388-201ENST00000550678 SPRR2EP22531 72 aa1.63□□□□□ -2.15
LINC02388-201ENST00000550678 SPRR2BP35325 72 aa1.63□□□□□ -2.15
LINC02388-201ENST00000550678 SPRR2AP35326 72 aa1.63□□□□□ -2.15
LINC02388-201ENST00000550678 SPRR2FQ96RM1 72 aa1.63□□□□□ -2.15
LINC02388-201ENST00000550678 MUC12Q9UKN1 5478 aa1.63□□□□□ -2.15
LINC02388-201ENST00000550678 MUC5BQ9HC84 5762 aaPredicted RBP1.61□□□□□ -2.15
LINC02388-201ENST00000550678 KRTAP6-1Q3LI64 71 aa1.61□□□□□ -2.15
LINC02388-201ENST00000550678 MDN1Q9NU22 5596 aa1.6□□□□□ -2.15
LINC02388-201ENST00000550678 SPRR2DP22532 72 aa1.59□□□□□ -2.15
LINC02388-201ENST00000550678 AHNAKQ09666 5890 aaKnown RBP1.57□□□□□ -2.16
LINC02388-201ENST00000550678 DSTQ03001 7570 aaKnown RBP1.46□□□□□ -2.17
LINC02388-201ENST00000550678 AHNAK2Q8IVF2 5795 aa1.46□□□□□ -2.18
LINC02388-201ENST00000550678 MUC19Q7Z5P9 8384 aa1.44□□□□□ -2.18
LINC02388-201ENST00000550678 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
LINC02388-201ENST00000550678 MT4P47944 62 aa1.34□□□□□ -2.19
LINC02388-201ENST00000550678 KRTAP5-10Q6L8G5 202 aa1.32□□□□□ -2.2
LINC02388-201ENST00000550678 KRTAP5-7Q6L8G8 165 aa1.3□□□□□ -2.2
LINC02388-201ENST00000550678 KRTAP20-2Q3LI61 65 aa1.28□□□□□ -2.2
LINC02388-201ENST00000550678 MUC5ACP98088 5654 aa1.23□□□□□ -2.21
LINC02388-201ENST00000550678 KRTAP21-2Q3LI59 83 aa1.08□□□□□ -2.24
LINC02388-201ENST00000550678 PHGR1C9JFL3 82 aa0.77□□□□□ -2.29
LINC02388-201ENST00000550678 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 106.4 ms