RNA–Protein interactions for RNA: ENST00000550188.1

ARFGAP1-223, Transcript of ADP ribosylation factor GTPase activating protein 1, human

TSL 5

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARFGAP1-223	ENST00000550188	SPRR2E	P22531	72 aa		4.72	□□□□□ -1.65
ARFGAP1-223	ENST00000550188	SPRR2B	P35325	72 aa		4.72	□□□□□ -1.65
ARFGAP1-223	ENST00000550188	SPRR2A	P35326	72 aa		4.72	□□□□□ -1.65
ARFGAP1-223	ENST00000550188	KRTAP23-1	A1A580	65 aa		4.71	□□□□□ -1.66
ARFGAP1-223	ENST00000550188	KRTAP20-1	Q3LI63	56 aa		4.71	□□□□□ -1.66
ARFGAP1-223	ENST00000550188	LCE1A	Q5T7P2	110 aa		4.66	□□□□□ -1.66
ARFGAP1-223	ENST00000550188	BRK1	Q8WUW1	75 aa		4.65	□□□□□ -1.67
ARFGAP1-223	ENST00000550188	TNP1	P09430	55 aa		4.64	□□□□□ -1.67
ARFGAP1-223	ENST00000550188	KRTAP2-3	P0C7H8	128 aa		4.61	□□□□□ -1.67
ARFGAP1-223	ENST00000550188	KRTAP2-4	Q9BYR9	128 aa		4.61	□□□□□ -1.67
ARFGAP1-223	ENST00000550188	C10orf95	Q9H7T3	257 aa		4.61	□□□□□ -1.67
ARFGAP1-223	ENST00000550188	KRTAP25-1	Q3LHN0	102 aa		4.57	□□□□□ -1.68
ARFGAP1-223	ENST00000550188	SPRR2D	P22532	72 aa		4.56	□□□□□ -1.68
ARFGAP1-223	ENST00000550188	ROMO1	P60602	79 aa		4.55	□□□□□ -1.68
ARFGAP1-223	ENST00000550188	KRTAP5-3	Q6L8H2	238 aa		4.53	□□□□□ -1.68
ARFGAP1-223	ENST00000550188	KRTAP19-7	Q3SYF9	63 aa		4.48	□□□□□ -1.69
ARFGAP1-223	ENST00000550188	KRTAP2-2	Q9BYT5	123 aa		4.47	□□□□□ -1.69
ARFGAP1-223	ENST00000550188	KRTAP2-1	Q9BYU5	128 aa		4.47	□□□□□ -1.69
ARFGAP1-223	ENST00000550188	MT1E	P04732	61 aa		4.44	□□□□□ -1.7
ARFGAP1-223	ENST00000550188	PRO0628	Q9UI54	55 aa		4.44	□□□□□ -1.7
ARFGAP1-223	ENST00000550188	PMAIP1	Q13794	54 aa		4.43	□□□□□ -1.7
ARFGAP1-223	ENST00000550188	PP632	Q6XCG6	107 aa		4.4	□□□□□ -1.71
ARFGAP1-223	ENST00000550188	KRTAP19-5	Q3LI72	72 aa		4.39	□□□□□ -1.71
ARFGAP1-223	ENST00000550188	KRTAP19-3	Q7Z4W3	81 aa		4.39	□□□□□ -1.71
ARFGAP1-223	ENST00000550188	LCE3A	Q5TA76	89 aa		4.38	□□□□□ -1.71
ARFGAP1-223	ENST00000550188	MT1G	P13640	62 aa		4.3	□□□□□ -1.72
ARFGAP1-223	ENST00000550188	KRTAP12-3	P60328	96 aa		4.27	□□□□□ -1.73
ARFGAP1-223	ENST00000550188	MT1L	Q93083	61 aa		4.26	□□□□□ -1.73
ARFGAP1-223	ENST00000550188	DST	Q03001	7570 aa	Known RBP	4.24	□□□□□ -1.73
ARFGAP1-223	ENST00000550188	MT1M	Q8N339	61 aa		4.22	□□□□□ -1.73
ARFGAP1-223	ENST00000550188		A0A0A0MQY5	61 aa		4.21	□□□□□ -1.74
ARFGAP1-223	ENST00000550188	KRTAP15-1	Q3LI76	137 aa		4.17	□□□□□ -1.74
ARFGAP1-223	ENST00000550188	KTN1-AS1	Q86SY8	53 aa		4.14	□□□□□ -1.75
ARFGAP1-223	ENST00000550188	KRTAP4-3	Q9BYR4	195 aa		4.1	□□□□□ -1.75
ARFGAP1-223	ENST00000550188	GPR98	Q8WXG9	6306 aa		4.08	□□□□□ -1.76
ARFGAP1-223	ENST00000550188	PRAC1	Q96KF2	57 aa		4.05	□□□□□ -1.76
ARFGAP1-223	ENST00000550188	MT4	P47944	62 aa		3.97	□□□□□ -1.77
ARFGAP1-223	ENST00000550188	LCE3C	Q5T5A8	94 aa		3.97	□□□□□ -1.77
ARFGAP1-223	ENST00000550188	KRTAP5-4	Q6L8H1	288 aa		3.97	□□□□□ -1.77
ARFGAP1-223	ENST00000550188	HMCN1	Q96RW7	5635 aa		3.9	□□□□□ -1.78
ARFGAP1-223	ENST00000550188	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.86	□□□□□ -1.79
ARFGAP1-223	ENST00000550188	KRTAP12-4	P60329	112 aa		3.76	□□□□□ -1.81
ARFGAP1-223	ENST00000550188	SPRR5	A0A1B0GTR4	108 aa		3.75	□□□□□ -1.81
ARFGAP1-223	ENST00000550188	KRTAP20-2	Q3LI61	65 aa		3.75	□□□□□ -1.81
ARFGAP1-223	ENST00000550188	AHNAK2	Q8IVF2	5795 aa		3.7	□□□□□ -1.82
ARFGAP1-223	ENST00000550188	KRTAP5-10	Q6L8G5	202 aa		3.67	□□□□□ -1.82
ARFGAP1-223	ENST00000550188	KRTAP9-6	A8MVA2	160 aa		3.63	□□□□□ -1.83
ARFGAP1-223	ENST00000550188	MT1A	P04731	61 aa		3.63	□□□□□ -1.83
ARFGAP1-223	ENST00000550188	SYNE1	Q8NF91	8797 aa	Known RBP	3.61	□□□□□ -1.83
ARFGAP1-223	ENST00000550188	KRTAP6-1	Q3LI64	71 aa		3.59	□□□□□ -1.83
ARFGAP1-223	ENST00000550188	LUZP6	Q538Z0	58 aa		3.55	□□□□□ -1.84
ARFGAP1-223	ENST00000550188	KRTAP5-7	Q6L8G8	165 aa		3.52	□□□□□ -1.85
ARFGAP1-223	ENST00000550188	KRTAP5-2	Q701N4	177 aa		3.5	□□□□□ -1.85
ARFGAP1-223	ENST00000550188	KRTAP6-2	Q3LI66	62 aa		3.42	□□□□□ -1.86
ARFGAP1-223	ENST00000550188	KRTAP5-11	Q6L8G4	156 aa		3.38	□□□□□ -1.87
ARFGAP1-223	ENST00000550188	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.37	□□□□□ -1.87
ARFGAP1-223	ENST00000550188	MT3	P25713	68 aa		3.33	□□□□□ -1.88
ARFGAP1-223	ENST00000550188	KRTAP5-8	O75690	187 aa		3.28	□□□□□ -1.88
ARFGAP1-223	ENST00000550188	NDUFAF8	A1L188	74 aa		3.25	□□□□□ -1.89
ARFGAP1-223	ENST00000550188	OBSCN	Q5VST9	7968 aa		3.22	□□□□□ -1.89
ARFGAP1-223	ENST00000550188	LCE1E	Q5T753	118 aa		3.19	□□□□□ -1.9
ARFGAP1-223	ENST00000550188	AHNAK	Q09666	5890 aa	Known RBP	3.16	□□□□□ -1.9
ARFGAP1-223	ENST00000550188	KRTAP5-1	Q6L8H4	278 aa		3.11	□□□□□ -1.91
ARFGAP1-223	ENST00000550188	MUC5AC	P98088	5654 aa		3.06	□□□□□ -1.92
ARFGAP1-223	ENST00000550188	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.05	□□□□□ -1.92
ARFGAP1-223	ENST00000550188	LCE1F	Q5T754	118 aa		3	□□□□□ -1.93
ARFGAP1-223	ENST00000550188	LCE3D	Q9BYE3	92 aa		2.96	□□□□□ -1.94
ARFGAP1-223	ENST00000550188	LCE3E	Q5T5B0	92 aa		2.85	□□□□□ -1.95
ARFGAP1-223	ENST00000550188	LCE1B	Q5T7P3	118 aa		2.84	□□□□□ -1.95
ARFGAP1-223	ENST00000550188	KRTAP4-4	Q9BYR3	166 aa		2.84	□□□□□ -1.95
ARFGAP1-223	ENST00000550188	LCE1C	Q5T751	118 aa		2.81	□□□□□ -1.96
ARFGAP1-223	ENST00000550188	INE1	O15225	51 aa		2.68	□□□□□ -1.98
ARFGAP1-223	ENST00000550188	KRTAP21-2	Q3LI59	83 aa		2.36	□□□□□ -2.03
ARFGAP1-223	ENST00000550188	PRM1	P04553	51 aa		2.3	□□□□□ -2.04
ARFGAP1-223	ENST00000550188	PHGR1	C9JFL3	82 aa		2.19	□□□□□ -2.06
ARFGAP1-223	ENST00000550188	MUC19	Q7Z5P9	8384 aa		1.97	□□□□□ -2.09
ARFGAP1-223	ENST00000550188	KRTAP21-1	Q3LI58	79 aa		1.64	□□□□□ -2.15
ARFGAP1-223	ENST00000550188	MUC16	Q8WXI7	14507 aa		1.47	□□□□□ -2.17

Retrieved 78 of 20,778 RNA–protein pairs in 127.2 ms