RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 KRTAP6-3Q3LI67 103 aa1.99□□□□□ -2.09
SCAF11-212ENST00000549162 CHKB-CPT1BH3BT56 60 aa1.98□□□□□ -2.09
SCAF11-212ENST00000549162 MT1EP04732 61 aa1.98□□□□□ -2.09
SCAF11-212ENST00000549162 MUC5BQ9HC84 5762 aaPredicted RBP1.97□□□□□ -2.09
SCAF11-212ENST00000549162 LCE3EQ5T5B0 92 aa1.93□□□□□ -2.1
SCAF11-212ENST00000549162 KRTAP4-8A0A0G2JLE6 195 aa1.93□□□□□ -2.1
SCAF11-212ENST00000549162 INE1O15225 51 aa1.92□□□□□ -2.1
SCAF11-212ENST00000549162 KRTAP4-11Q9BYQ6 195 aa1.91□□□□□ -2.1
SCAF11-212ENST00000549162 KRTAP10-7P60409 375 aaPredicted RBP1.89□□□□□ -2.11
SCAF11-212ENST00000549162 KRTAP19-7Q3SYF9 63 aa1.89□□□□□ -2.11
SCAF11-212ENST00000549162 KRTAP5-5Q701N2 237 aaPredicted RBP1.89□□□□□ -2.11
SCAF11-212ENST00000549162 KRTAP5-4Q6L8H1 288 aa1.88□□□□□ -2.11
SCAF11-212ENST00000549162 KRTAP4-9Q9BYQ8 210 aa1.88□□□□□ -2.11
SCAF11-212ENST00000549162 KRTAP20-1Q3LI63 56 aa1.87□□□□□ -2.11
SCAF11-212ENST00000549162 TNP1P09430 55 aa1.86□□□□□ -2.11
SCAF11-212ENST00000549162 KRTAP4-7Q9BYR0 210 aa1.86□□□□□ -2.11
SCAF11-212ENST00000549162 KRTAP5-3Q6L8H2 238 aa1.85□□□□□ -2.11
SCAF11-212ENST00000549162 LCE1EQ5T753 118 aa1.84□□□□□ -2.12
SCAF11-212ENST00000549162 MT1LQ93083 61 aa1.82□□□□□ -2.12
SCAF11-212ENST00000549162 KRTAP19-5Q3LI72 72 aa1.82□□□□□ -2.12
SCAF11-212ENST00000549162 PLAC4Q8WY50 150 aa1.82□□□□□ -2.12
SCAF11-212ENST00000549162 MT1GP13640 62 aa1.81□□□□□ -2.12
SCAF11-212ENST00000549162 MT1MQ8N339 61 aa1.8□□□□□ -2.12
SCAF11-212ENST00000549162 KRTAP19-3Q7Z4W3 81 aa1.77□□□□□ -2.13
SCAF11-212ENST00000549162 KRTAP4-2Q9BYR5 136 aa1.76□□□□□ -2.13
SCAF11-212ENST00000549162 NEBP20929 6669 aa1.76□□□□□ -2.13
SCAF11-212ENST00000549162 KRTAP5-2Q701N4 177 aa1.75□□□□□ -2.13
SCAF11-212ENST00000549162 HMCN1Q96RW7 5635 aa1.75□□□□□ -2.13
SCAF11-212ENST00000549162 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
SCAF11-212ENST00000549162 LCE3DQ9BYE3 92 aa1.74□□□□□ -2.13
SCAF11-212ENST00000549162 KRTAP2-3P0C7H8 128 aa1.74□□□□□ -2.13
SCAF11-212ENST00000549162 KRTAP2-4Q9BYR9 128 aa1.74□□□□□ -2.13
SCAF11-212ENST00000549162 KRTAP2-1Q9BYU5 128 aa1.74□□□□□ -2.13
SCAF11-212ENST00000549162 MT1AP04731 61 aa1.7□□□□□ -2.14
SCAF11-212ENST00000549162 LCE3AQ5TA76 89 aa1.7□□□□□ -2.14
SCAF11-212ENST00000549162 KRTAP12-3P60328 96 aa1.69□□□□□ -2.14
SCAF11-212ENST00000549162 KRTAP5-7Q6L8G8 165 aa1.69□□□□□ -2.14
SCAF11-212ENST00000549162 KMT2DO14686 5537 aa1.65□□□□□ -2.15
SCAF11-212ENST00000549162 SYNE2Q8WXH0 6885 aaKnown RBP1.63□□□□□ -2.15
SCAF11-212ENST00000549162 M0R2T5 61 aa1.62□□□□□ -2.15
SCAF11-212ENST00000549162 FCGBPQ9Y6R7 5405 aaPredicted RBP1.61□□□□□ -2.15
SCAF11-212ENST00000549162 FSIP2Q5CZC0 6907 aa1.6□□□□□ -2.15
SCAF11-212ENST00000549162 A0A0D9SG42 100 aa1.6□□□□□ -2.15
SCAF11-212ENST00000549162 MUC12Q9UKN1 5478 aa1.59□□□□□ -2.15
SCAF11-212ENST00000549162 KRTAP5-8O75690 187 aa1.59□□□□□ -2.15
SCAF11-212ENST00000549162 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.57□□□□□ -2.16
SCAF11-212ENST00000549162 AHNAK2Q8IVF2 5795 aa1.55□□□□□ -2.16
SCAF11-212ENST00000549162 KRTAP12-4P60329 112 aa1.54□□□□□ -2.16
SCAF11-212ENST00000549162 KRTAP9-6A8MVA2 160 aa1.53□□□□□ -2.17
SCAF11-212ENST00000549162 KRTAP5-10Q6L8G5 202 aa1.52□□□□□ -2.17
SCAF11-212ENST00000549162 MACF1Q9UPN3 7388 aaKnown RBP1.51□□□□□ -2.17
SCAF11-212ENST00000549162 KRTAP5-1Q6L8H4 278 aa1.47□□□□□ -2.17
SCAF11-212ENST00000549162 DSTQ03001 7570 aaKnown RBP1.46□□□□□ -2.18
SCAF11-212ENST00000549162 MDN1Q9NU22 5596 aa1.46□□□□□ -2.18
SCAF11-212ENST00000549162 SPRR2EP22531 72 aa1.45□□□□□ -2.18
SCAF11-212ENST00000549162 SPRR2BP35325 72 aa1.45□□□□□ -2.18
SCAF11-212ENST00000549162 SPRR2AP35326 72 aa1.45□□□□□ -2.18
SCAF11-212ENST00000549162 KRTAP20-2Q3LI61 65 aa1.44□□□□□ -2.18
SCAF11-212ENST00000549162 SPRR2DP22532 72 aa1.44□□□□□ -2.18
SCAF11-212ENST00000549162 MUC5ACP98088 5654 aa1.41□□□□□ -2.18
SCAF11-212ENST00000549162 SPRR2FQ96RM1 72 aa1.41□□□□□ -2.18
SCAF11-212ENST00000549162 LCE1CQ5T751 118 aa1.38□□□□□ -2.19
SCAF11-212ENST00000549162 LCE1BQ5T7P3 118 aa1.38□□□□□ -2.19
SCAF11-212ENST00000549162 KRTAP6-1Q3LI64 71 aa1.36□□□□□ -2.19
SCAF11-212ENST00000549162 KRTAP5-11Q6L8G4 156 aa1.32□□□□□ -2.2
SCAF11-212ENST00000549162 OBSCNQ5VST9 7968 aa1.29□□□□□ -2.2
SCAF11-212ENST00000549162 KRTAP4-3Q9BYR4 195 aa1.24□□□□□ -2.21
SCAF11-212ENST00000549162 KRTAP6-2Q3LI66 62 aa1.18□□□□□ -2.22
SCAF11-212ENST00000549162 MUC19Q7Z5P9 8384 aa1.18□□□□□ -2.22
SCAF11-212ENST00000549162 MT4P47944 62 aa1.15□□□□□ -2.22
SCAF11-212ENST00000549162 KRTAP4-4Q9BYR3 166 aa1.11□□□□□ -2.23
SCAF11-212ENST00000549162 KRTAP21-2Q3LI59 83 aa1.1□□□□□ -2.23
SCAF11-212ENST00000549162 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
SCAF11-212ENST00000549162 SYNE1Q8NF91 8797 aaKnown RBP0.96□□□□□ -2.26
SCAF11-212ENST00000549162 KRTAP21-1Q3LI58 79 aa0.88□□□□□ -2.27
SCAF11-212ENST00000549162 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
SCAF11-212ENST00000549162 PRM1P04553 51 aa0.79□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 46.1 ms