RNA–Protein interactions for RNA: ENST00000548496.1

KRT18-205, Transcript of keratin 18, humanhuman

TSL 2

Gene KRT18, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-205ENST00000548496 MDN1Q9NU22 5596 aa4.48□□□□□ -1.69
KRT18-205ENST00000548496 MT1EP04732 61 aa4.48□□□□□ -1.69
KRT18-205ENST00000548496 LCE3BQ5TA77 95 aa4.47□□□□□ -1.69
KRT18-205ENST00000548496 CDC42SE1Q9NRR8 79 aa4.47□□□□□ -1.69
KRT18-205ENST00000548496 KRTAP20-1Q3LI63 56 aa4.45□□□□□ -1.7
KRT18-205ENST00000548496 KRTAP4-12Q9BQ66 201 aa4.45□□□□□ -1.7
KRT18-205ENST00000548496 SPRR2DP22532 72 aa4.44□□□□□ -1.7
KRT18-205ENST00000548496 KRTAP25-1Q3LHN0 102 aa4.41□□□□□ -1.7
KRT18-205ENST00000548496 KRTAP2-3P0C7H8 128 aa4.38□□□□□ -1.71
KRT18-205ENST00000548496 KRTAP2-4Q9BYR9 128 aa4.38□□□□□ -1.71
KRT18-205ENST00000548496 KRTAP19-3Q7Z4W3 81 aa4.37□□□□□ -1.71
KRT18-205ENST00000548496 ROMO1P60602 79 aa4.35□□□□□ -1.71
KRT18-205ENST00000548496 KRTAP4-7Q9BYR0 210 aa4.35□□□□□ -1.71
KRT18-205ENST00000548496 LCE5AQ5TCM9 118 aa4.34□□□□□ -1.71
KRT18-205ENST00000548496 KRTAP12-3P60328 96 aa4.33□□□□□ -1.72
KRT18-205ENST00000548496 BRK1Q8WUW1 75 aa4.33□□□□□ -1.72
KRT18-205ENST00000548496 MT1LQ93083 61 aa4.32□□□□□ -1.72
KRT18-205ENST00000548496 KTN1-AS1Q86SY8 53 aa4.31□□□□□ -1.72
KRT18-205ENST00000548496 MT1GP13640 62 aa4.29□□□□□ -1.72
KRT18-205ENST00000548496 KRTAP23-1A1A580 65 aa4.28□□□□□ -1.72
KRT18-205ENST00000548496 MT1MQ8N339 61 aa4.26□□□□□ -1.73
KRT18-205ENST00000548496 KRTAP2-2Q9BYT5 123 aa4.25□□□□□ -1.73
KRT18-205ENST00000548496 KRTAP2-1Q9BYU5 128 aa4.25□□□□□ -1.73
KRT18-205ENST00000548496 KRTAP4-3Q9BYR4 195 aa4.23□□□□□ -1.73
KRT18-205ENST00000548496 PP632Q6XCG6 107 aa4.22□□□□□ -1.73
KRT18-205ENST00000548496 KRTAP4-2Q9BYR5 136 aa4.21□□□□□ -1.74
KRT18-205ENST00000548496 LCE1DQ5T752 114 aa4.2□□□□□ -1.74
KRT18-205ENST00000548496 KRTAP4-9Q9BYQ8 210 aa4.17□□□□□ -1.74
KRT18-205ENST00000548496 DSTQ03001 7570 aaKnown RBP4.16□□□□□ -1.74
KRT18-205ENST00000548496 KRTAP15-1Q3LI76 137 aa4.12□□□□□ -1.75
KRT18-205ENST00000548496 KRTAP19-4Q3LI73 84 aa4.09□□□□□ -1.75
KRT18-205ENST00000548496 KRTAP5-3Q6L8H2 238 aa4.04□□□□□ -1.76
KRT18-205ENST00000548496 LCE3CQ5T5A8 94 aa4□□□□□ -1.77
KRT18-205ENST00000548496 KRTAP4-11Q9BYQ6 195 aa3.96□□□□□ -1.78
KRT18-205ENST00000548496 MT4P47944 62 aa3.92□□□□□ -1.78
KRT18-205ENST00000548496 PRAC1Q96KF2 57 aa3.91□□□□□ -1.78
KRT18-205ENST00000548496 LCE4AQ5TA78 99 aa3.89□□□□□ -1.79
KRT18-205ENST00000548496 KRTAP5-4Q6L8H1 288 aa3.87□□□□□ -1.79
KRT18-205ENST00000548496 GPR98Q8WXG9 6306 aa3.85□□□□□ -1.79
KRT18-205ENST00000548496 KRTAP5-5Q701N2 237 aaPredicted RBP3.84□□□□□ -1.79
KRT18-205ENST00000548496 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
KRT18-205ENST00000548496 LUZP6Q538Z0 58 aa3.8□□□□□ -1.8
KRT18-205ENST00000548496 SYNE1Q8NF91 8797 aaKnown RBP3.74□□□□□ -1.81
KRT18-205ENST00000548496 HMCN1Q96RW7 5635 aa3.68□□□□□ -1.82
KRT18-205ENST00000548496 KRTAP12-4P60329 112 aa3.68□□□□□ -1.82
KRT18-205ENST00000548496 MT1AP04731 61 aa3.67□□□□□ -1.82
KRT18-205ENST00000548496 KRTAP6-1Q3LI64 71 aa3.67□□□□□ -1.82
KRT18-205ENST00000548496 KRTAP20-2Q3LI61 65 aa3.66□□□□□ -1.82
KRT18-205ENST00000548496 SPRR5A0A1B0GTR4 108 aa3.62□□□□□ -1.83
KRT18-205ENST00000548496 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
KRT18-205ENST00000548496 AHNAK2Q8IVF2 5795 aa3.49□□□□□ -1.85
KRT18-205ENST00000548496 KRTAP6-2Q3LI66 62 aa3.46□□□□□ -1.86
KRT18-205ENST00000548496 KRTAP5-10Q6L8G5 202 aa3.45□□□□□ -1.86
KRT18-205ENST00000548496 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
KRT18-205ENST00000548496 MT3P25713 68 aa3.33□□□□□ -1.88
KRT18-205ENST00000548496 KRTAP5-7Q6L8G8 165 aa3.27□□□□□ -1.89
KRT18-205ENST00000548496 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
KRT18-205ENST00000548496 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
KRT18-205ENST00000548496 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
KRT18-205ENST00000548496 INE1O15225 51 aa2.99□□□□□ -1.93
KRT18-205ENST00000548496 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
KRT18-205ENST00000548496 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
KRT18-205ENST00000548496 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
KRT18-205ENST00000548496 MUC5ACP98088 5654 aa2.93□□□□□ -1.94
KRT18-205ENST00000548496 AHNAKQ09666 5890 aaKnown RBP2.89□□□□□ -1.95
KRT18-205ENST00000548496 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
KRT18-205ENST00000548496 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.95
KRT18-205ENST00000548496 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
KRT18-205ENST00000548496 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
KRT18-205ENST00000548496 KRTAP5-11Q6L8G4 156 aa2.7□□□□□ -1.98
KRT18-205ENST00000548496 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
KRT18-205ENST00000548496 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.03
KRT18-205ENST00000548496 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
KRT18-205ENST00000548496 PRM1P04553 51 aa2.28□□□□□ -2.04
KRT18-205ENST00000548496 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
KRT18-205ENST00000548496 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
KRT18-205ENST00000548496 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
KRT18-205ENST00000548496 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 97.6 ms