RNA–Protein interactions for RNA: ENST00000548032.6

SEC23A-204, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-204ENST00000548032 MT1EP04732 61 aa5.39□□□□□ -1.55
SEC23A-204ENST00000548032 KRTAP15-1Q3LI76 137 aa5.38□□□□□ -1.55
SEC23A-204ENST00000548032 DSTQ03001 7570 aaKnown RBP5.37□□□□□ -1.55
SEC23A-204ENST00000548032 GPR98Q8WXG9 6306 aa5.37□□□□□ -1.55
SEC23A-204ENST00000548032 LINC01558Q9Y6Z2 57 aa5.36□□□□□ -1.55
SEC23A-204ENST00000548032 TMEM258P61165 79 aa5.35□□□□□ -1.55
SEC23A-204ENST00000548032 KRTAP19-5Q3LI72 72 aa5.34□□□□□ -1.55
SEC23A-204ENST00000548032 KRTAP19-3Q7Z4W3 81 aa5.34□□□□□ -1.55
SEC23A-204ENST00000548032 LCE4AQ5TA78 99 aa5.33□□□□□ -1.56
SEC23A-204ENST00000548032 LCE5AQ5TCM9 118 aa5.33□□□□□ -1.56
SEC23A-204ENST00000548032 C10orf95Q9H7T3 257 aa5.3□□□□□ -1.56
SEC23A-204ENST00000548032 TNP1P09430 55 aa5.28□□□□□ -1.56
SEC23A-204ENST00000548032 UQCR11O14957 56 aa5.24□□□□□ -1.57
SEC23A-204ENST00000548032 LCE3AQ5TA76 89 aa5.24□□□□□ -1.57
SEC23A-204ENST00000548032 MT1GP13640 62 aa5.2□□□□□ -1.58
SEC23A-204ENST00000548032 PP632Q6XCG6 107 aa5.18□□□□□ -1.58
SEC23A-204ENST00000548032 MT1LQ93083 61 aa5.16□□□□□ -1.58
SEC23A-204ENST00000548032 MIR22HGQ0VDD5 57 aa5.14□□□□□ -1.59
SEC23A-204ENST00000548032 MT1MQ8N339 61 aa5.13□□□□□ -1.59
SEC23A-204ENST00000548032 PSPHP1O15172 72 aa5.08□□□□□ -1.6
SEC23A-204ENST00000548032 V9GYY9 64 aa5.06□□□□□ -1.6
SEC23A-204ENST00000548032 K7ERS5 55 aa5.04□□□□□ -1.6
SEC23A-204ENST00000548032 KRTAP12-3P60328 96 aa5.04□□□□□ -1.6
SEC23A-204ENST00000548032 PRAC1Q96KF2 57 aa5.04□□□□□ -1.6
SEC23A-204ENST00000548032 KRTAP4-3Q9BYR4 195 aa5.04□□□□□ -1.6
SEC23A-204ENST00000548032 Q1T7F1 81 aa5.01□□□□□ -1.61
SEC23A-204ENST00000548032 MT4P47944 62 aa5□□□□□ -1.61
SEC23A-204ENST00000548032 HMCN1Q96RW7 5635 aa4.99□□□□□ -1.61
SEC23A-204ENST00000548032 KRTAP25-1Q3LHN0 102 aa4.98□□□□□ -1.61
SEC23A-204ENST00000548032 A6NED7 52 aa4.9□□□□□ -1.63
SEC23A-204ENST00000548032 AHNAK2Q8IVF2 5795 aa4.87□□□□□ -1.63
SEC23A-204ENST00000548032 KRTAP5-4Q6L8H1 288 aa4.86□□□□□ -1.63
SEC23A-204ENST00000548032 KRTAP5-10Q6L8G5 202 aa4.85□□□□□ -1.63
SEC23A-204ENST00000548032 RPS28P62857 69 aaKnown RBP4.83□□□□□ -1.64
SEC23A-204ENST00000548032 CDC42SE1Q9NRR8 79 aa4.77□□□□□ -1.65
SEC23A-204ENST00000548032 ROMO1P60602 79 aa4.7□□□□□ -1.66
SEC23A-204ENST00000548032 KRTAP5-7Q6L8G8 165 aa4.69□□□□□ -1.66
SEC23A-204ENST00000548032 KRTAP5-5Q701N2 237 aaPredicted RBP4.68□□□□□ -1.66
SEC23A-204ENST00000548032 LCE3CQ5T5A8 94 aa4.63□□□□□ -1.67
SEC23A-204ENST00000548032 KRTAP20-2Q3LI61 65 aa4.61□□□□□ -1.67
SEC23A-204ENST00000548032 KRTAP12-4P60329 112 aa4.58□□□□□ -1.68
SEC23A-204ENST00000548032 SPRR5A0A1B0GTR4 108 aa4.55□□□□□ -1.68
SEC23A-204ENST00000548032 SYNE1Q8NF91 8797 aaKnown RBP4.54□□□□□ -1.68
SEC23A-204ENST00000548032 NDUFAF8A1L188 74 aa4.5□□□□□ -1.69
SEC23A-204ENST00000548032 MT1AP04731 61 aa4.39□□□□□ -1.71
SEC23A-204ENST00000548032 KRTAP6-1Q3LI64 71 aa4.37□□□□□ -1.71
SEC23A-204ENST00000548032 KRTAP9-6A8MVA2 160 aa4.36□□□□□ -1.71
SEC23A-204ENST00000548032 BRK1Q8WUW1 75 aa4.27□□□□□ -1.73
SEC23A-204ENST00000548032 KRTAP5-2Q701N4 177 aa4.24□□□□□ -1.73
SEC23A-204ENST00000548032 MT3P25713 68 aa4.23□□□□□ -1.73
SEC23A-204ENST00000548032 KRTAP6-2Q3LI66 62 aa4.18□□□□□ -1.74
SEC23A-204ENST00000548032 PRO0628Q9UI54 55 aa4.17□□□□□ -1.74
SEC23A-204ENST00000548032 KRTAP5-8O75690 187 aa4.13□□□□□ -1.75
SEC23A-204ENST00000548032 MUC5ACP98088 5654 aa4.1□□□□□ -1.75
SEC23A-204ENST00000548032 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
SEC23A-204ENST00000548032 AHNAKQ09666 5890 aaKnown RBP4.09□□□□□ -1.75
SEC23A-204ENST00000548032 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
SEC23A-204ENST00000548032 MUC5BQ9HC84 5762 aaPredicted RBP4.07□□□□□ -1.76
SEC23A-204ENST00000548032 PMAIP1Q13794 54 aa4.03□□□□□ -1.76
SEC23A-204ENST00000548032 LCE1FQ5T754 118 aa4.03□□□□□ -1.76
SEC23A-204ENST00000548032 KTN1-AS1Q86SY8 53 aa3.88□□□□□ -1.79
SEC23A-204ENST00000548032 KRTAP5-1Q6L8H4 278 aa3.82□□□□□ -1.8
SEC23A-204ENST00000548032 KRTAP5-11Q6L8G4 156 aa3.69□□□□□ -1.82
SEC23A-204ENST00000548032 LUZP6Q538Z0 58 aa3.68□□□□□ -1.82
SEC23A-204ENST00000548032 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
SEC23A-204ENST00000548032 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
SEC23A-204ENST00000548032 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
SEC23A-204ENST00000548032 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
SEC23A-204ENST00000548032 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
SEC23A-204ENST00000548032 LCE3DQ9BYE3 92 aa3.35□□□□□ -1.87
SEC23A-204ENST00000548032 KRTAP21-2Q3LI59 83 aa2.86□□□□□ -1.95
SEC23A-204ENST00000548032 PHGR1C9JFL3 82 aa2.85□□□□□ -1.95
SEC23A-204ENST00000548032 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
SEC23A-204ENST00000548032 INE1O15225 51 aa2.44□□□□□ -2.02
SEC23A-204ENST00000548032 PRM1P04553 51 aa2.42□□□□□ -2.02
SEC23A-204ENST00000548032 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
SEC23A-204ENST00000548032 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 89 ms