RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 KRTAP2-3P0C7H8 128 aa8.44□□□□□ -1.06
SMARCD1-203ENST00000547247 KRTAP2-4Q9BYR9 128 aa8.44□□□□□ -1.06
SMARCD1-203ENST00000547247 KRTAP23-1A1A580 65 aa8.44□□□□□ -1.06
SMARCD1-203ENST00000547247 KRTAP12-3P60328 96 aa8.38□□□□□ -1.07
SMARCD1-203ENST00000547247 KRTAP19-3Q7Z4W3 81 aa8.38□□□□□ -1.07
SMARCD1-203ENST00000547247 LCE5AQ5TCM9 118 aa8.31□□□□□ -1.08
SMARCD1-203ENST00000547247 MT1LQ93083 61 aa8.27□□□□□ -1.09
SMARCD1-203ENST00000547247 MT1GP13640 62 aa8.26□□□□□ -1.09
SMARCD1-203ENST00000547247 PP632Q6XCG6 107 aa8.26□□□□□ -1.09
SMARCD1-203ENST00000547247 KRTAP2-2Q9BYT5 123 aa8.2□□□□□ -1.1
SMARCD1-203ENST00000547247 KRTAP2-1Q9BYU5 128 aa8.2□□□□□ -1.1
SMARCD1-203ENST00000547247 LCE3BQ5TA77 95 aa8.19□□□□□ -1.1
SMARCD1-203ENST00000547247 PMAIP1Q13794 54 aa8.14□□□□□ -1.11
SMARCD1-203ENST00000547247 MT1MQ8N339 61 aa8.1□□□□□ -1.11
SMARCD1-203ENST00000547247 KRTAP15-1Q3LI76 137 aa8.02□□□□□ -1.13
SMARCD1-203ENST00000547247 PRO0628Q9UI54 55 aa8.02□□□□□ -1.13
SMARCD1-203ENST00000547247 DSTQ03001 7570 aaKnown RBP7.97□□□□□ -1.13
SMARCD1-203ENST00000547247 KRTAP19-4Q3LI73 84 aa7.95□□□□□ -1.14
SMARCD1-203ENST00000547247 KRTAP4-7Q9BYR0 210 aa7.9□□□□□ -1.14
SMARCD1-203ENST00000547247 KRTAP4-3Q9BYR4 195 aa7.88□□□□□ -1.15
SMARCD1-203ENST00000547247 LCE3CQ5T5A8 94 aa7.76□□□□□ -1.17
SMARCD1-203ENST00000547247 PRAC1Q96KF2 57 aa7.67□□□□□ -1.18
SMARCD1-203ENST00000547247 KRTAP4-9Q9BYQ8 210 aa7.55□□□□□ -1.2
SMARCD1-203ENST00000547247 KTN1-AS1Q86SY8 53 aa7.54□□□□□ -1.2
SMARCD1-203ENST00000547247 LCE4AQ5TA78 99 aa7.47□□□□□ -1.21
SMARCD1-203ENST00000547247 LOC100996750A0A140TA64 210 aa7.46□□□□□ -1.22
SMARCD1-203ENST00000547247 LCE1DQ5T752 114 aa7.41□□□□□ -1.22
SMARCD1-203ENST00000547247 KRTAP5-4Q6L8H1 288 aa7.39□□□□□ -1.23
SMARCD1-203ENST00000547247 MT4P47944 62 aa7.38□□□□□ -1.23
SMARCD1-203ENST00000547247 KRTAP5-5Q701N2 237 aaPredicted RBP7.37□□□□□ -1.23
SMARCD1-203ENST00000547247 KRTAP9-6A8MVA2 160 aa7.29□□□□□ -1.24
SMARCD1-203ENST00000547247 HMCN1Q96RW7 5635 aa7.24□□□□□ -1.25
SMARCD1-203ENST00000547247 KRTAP4-6Q9BYQ5 205 aa7.2□□□□□ -1.26
SMARCD1-203ENST00000547247 KRTAP12-4P60329 112 aa7.07□□□□□ -1.28
SMARCD1-203ENST00000547247 SYNE1Q8NF91 8797 aaKnown RBP7.06□□□□□ -1.28
SMARCD1-203ENST00000547247 MT1AP04731 61 aa7.05□□□□□ -1.28
SMARCD1-203ENST00000547247 SPRR5A0A1B0GTR4 108 aa6.99□□□□□ -1.29
SMARCD1-203ENST00000547247 KRTAP6-1Q3LI64 71 aa6.98□□□□□ -1.29
SMARCD1-203ENST00000547247 KRTAP20-2Q3LI61 65 aa6.97□□□□□ -1.29
SMARCD1-203ENST00000547247 GPR98Q8WXG9 6306 aa6.95□□□□□ -1.3
SMARCD1-203ENST00000547247 AHNAK2Q8IVF2 5795 aa6.84□□□□□ -1.31
SMARCD1-203ENST00000547247 KRTAP9-4Q9BYQ2 154 aa6.76□□□□□ -1.33
SMARCD1-203ENST00000547247 KRTAP5-3Q6L8H2 238 aa6.74□□□□□ -1.33
SMARCD1-203ENST00000547247 KRTAP5-10Q6L8G5 202 aa6.7□□□□□ -1.34
SMARCD1-203ENST00000547247 KRTAP5-2Q701N4 177 aa6.57□□□□□ -1.36
SMARCD1-203ENST00000547247 KRTAP6-2Q3LI66 62 aa6.55□□□□□ -1.36
SMARCD1-203ENST00000547247 H3BS24 57 aa6.45□□□□□ -1.38
SMARCD1-203ENST00000547247 MT3P25713 68 aa6.44□□□□□ -1.38
SMARCD1-203ENST00000547247 LUZP6Q538Z0 58 aa6.42□□□□□ -1.38
SMARCD1-203ENST00000547247 KRTAP5-7Q6L8G8 165 aa6.39□□□□□ -1.39
SMARCD1-203ENST00000547247 KRTAP4-11Q9BYQ6 195 aa6.28□□□□□ -1.4
SMARCD1-203ENST00000547247 OBSCNQ5VST9 7968 aa6.14□□□□□ -1.43
SMARCD1-203ENST00000547247 KRTAP5-8O75690 187 aa6.06□□□□□ -1.44
SMARCD1-203ENST00000547247 KRTAP5-1Q6L8H4 278 aa5.8□□□□□ -1.48
SMARCD1-203ENST00000547247 LCE1EQ5T753 118 aa5.77□□□□□ -1.49
SMARCD1-203ENST00000547247 LCE3DQ9BYE3 92 aa5.72□□□□□ -1.49
SMARCD1-203ENST00000547247 NDUFAF8A1L188 74 aa5.71□□□□□ -1.5
SMARCD1-203ENST00000547247 KRTAP4-12Q9BQ66 201 aa5.7□□□□□ -1.5
SMARCD1-203ENST00000547247 KRTAP9-9Q9BYP9 154 aa5.69□□□□□ -1.5
SMARCD1-203ENST00000547247 A0A0A0MQY5 61 aa5.65□□□□□ -1.5
SMARCD1-203ENST00000547247 MUC5ACP98088 5654 aa5.62□□□□□ -1.51
SMARCD1-203ENST00000547247 MUC5BQ9HC84 5762 aaPredicted RBP5.55□□□□□ -1.52
SMARCD1-203ENST00000547247 LCE3EQ5T5B0 92 aa5.48□□□□□ -1.53
SMARCD1-203ENST00000547247 AHNAKQ09666 5890 aaKnown RBP5.47□□□□□ -1.53
SMARCD1-203ENST00000547247 LCE1BQ5T7P3 118 aa5.39□□□□□ -1.55
SMARCD1-203ENST00000547247 KRTAP4-2Q9BYR5 136 aa5.38□□□□□ -1.55
SMARCD1-203ENST00000547247 LCE1CQ5T751 118 aa5.35□□□□□ -1.55
SMARCD1-203ENST00000547247 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.94□□□□□ -1.62
SMARCD1-203ENST00000547247 KRTAP5-11Q6L8G4 156 aa4.79□□□□□ -1.64
SMARCD1-203ENST00000547247 INE1O15225 51 aa4.74□□□□□ -1.65
SMARCD1-203ENST00000547247 KRTAP21-2Q3LI59 83 aa4.58□□□□□ -1.68
SMARCD1-203ENST00000547247 LCE1FQ5T754 118 aa4.53□□□□□ -1.68
SMARCD1-203ENST00000547247 PRM1P04553 51 aa4.44□□□□□ -1.7
SMARCD1-203ENST00000547247 PHGR1C9JFL3 82 aa4.12□□□□□ -1.75
SMARCD1-203ENST00000547247 KRTAP4-4Q9BYR3 166 aa4.11□□□□□ -1.75
SMARCD1-203ENST00000547247 MUC19Q7Z5P9 8384 aa3.75□□□□□ -1.81
SMARCD1-203ENST00000547247 KRTAP21-1Q3LI58 79 aa2.93□□□□□ -1.94
SMARCD1-203ENST00000547247 MUC16Q8WXI7 14507 aa2.67□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms