RNA–Protein interactions for RNA: ENST00000546761.5

PRIM1-202, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-202ENST00000546761 LCE3AQ5TA76 89 aa2.26□□□□□ -2.05
PRIM1-202ENST00000546761 SPATA8Q6RVD6 105 aa2.26□□□□□ -2.05
PRIM1-202ENST00000546761 FSIP2Q5CZC0 6907 aa2.26□□□□□ -2.05
PRIM1-202ENST00000546761 A6NN06 94 aa2.25□□□□□ -2.05
PRIM1-202ENST00000546761 CDC42SE1Q9NRR8 79 aa2.25□□□□□ -2.05
PRIM1-202ENST00000546761 KRTAP13-4Q3LI77 160 aa2.24□□□□□ -2.05
PRIM1-202ENST00000546761 ROMO1P60602 79 aa2.22□□□□□ -2.05
PRIM1-202ENST00000546761 A0A0D9SG42 100 aa2.21□□□□□ -2.06
PRIM1-202ENST00000546761 KRTAP19-8Q3LI54 63 aa2.21□□□□□ -2.06
PRIM1-202ENST00000546761 PLAC4Q8WY50 150 aa2.21□□□□□ -2.06
PRIM1-202ENST00000546761 A8MU10 97 aa2.2□□□□□ -2.06
PRIM1-202ENST00000546761 KRTAP12-1P59990 96 aa2.18□□□□□ -2.06
PRIM1-202ENST00000546761 PRO2289Q9P1D8 64 aa2.17□□□□□ -2.06
PRIM1-202ENST00000546761 MT1BP07438 61 aa2.16□□□□□ -2.06
PRIM1-202ENST00000546761 KRTAP12-2P59991 146 aa2.16□□□□□ -2.06
PRIM1-202ENST00000546761 LCE3EQ5T5B0 92 aa2.16□□□□□ -2.06
PRIM1-202ENST00000546761 USH2AO75445 5202 aa2.14□□□□□ -2.07
PRIM1-202ENST00000546761 KRTAP19-6Q3LI70 58 aa2.09□□□□□ -2.07
PRIM1-202ENST00000546761 SSPOA2VEC9 5147 aa2.08□□□□□ -2.08
PRIM1-202ENST00000546761 MT1XP80297 61 aa2.08□□□□□ -2.08
PRIM1-202ENST00000546761 TNP1P09430 55 aa2.06□□□□□ -2.08
PRIM1-202ENST00000546761 C10orf95Q9H7T3 257 aa2.05□□□□□ -2.08
PRIM1-202ENST00000546761 FCGBPQ9Y6R7 5405 aaPredicted RBP2.03□□□□□ -2.08
PRIM1-202ENST00000546761 KRTAP5-5Q701N2 237 aaPredicted RBP2.01□□□□□ -2.09
PRIM1-202ENST00000546761 SYNE2Q8WXH0 6885 aaKnown RBP2□□□□□ -2.09
PRIM1-202ENST00000546761 PP632Q6XCG6 107 aa1.99□□□□□ -2.09
PRIM1-202ENST00000546761 KRTAP6-3Q3LI67 103 aa1.96□□□□□ -2.1
PRIM1-202ENST00000546761 LCE1CQ5T751 118 aa1.95□□□□□ -2.1
PRIM1-202ENST00000546761 LCE1BQ5T7P3 118 aa1.95□□□□□ -2.1
PRIM1-202ENST00000546761 SPRR5A0A1B0GTR4 108 aa1.94□□□□□ -2.1
PRIM1-202ENST00000546761 MACF1Q9UPN3 7388 aaKnown RBP1.94□□□□□ -2.1
PRIM1-202ENST00000546761 KRTAP8-1Q8IUC2 63 aa1.92□□□□□ -2.1
PRIM1-202ENST00000546761 KRTAP20-1Q3LI63 56 aa1.9□□□□□ -2.11
PRIM1-202ENST00000546761 KMT2DO14686 5537 aa1.89□□□□□ -2.11
PRIM1-202ENST00000546761 KRTAP5-8O75690 187 aa1.89□□□□□ -2.11
PRIM1-202ENST00000546761 KRTAP12-3P60328 96 aa1.87□□□□□ -2.11
PRIM1-202ENST00000546761 NEBP20929 6669 aa1.86□□□□□ -2.11
PRIM1-202ENST00000546761 KRTAP19-5Q3LI72 72 aa1.86□□□□□ -2.11
PRIM1-202ENST00000546761 INE1O15225 51 aa1.85□□□□□ -2.11
PRIM1-202ENST00000546761 KRTAP19-7Q3SYF9 63 aa1.85□□□□□ -2.11
PRIM1-202ENST00000546761 SPRR2FQ96RM1 72 aa1.84□□□□□ -2.11
PRIM1-202ENST00000546761 MT1EP04732 61 aa1.83□□□□□ -2.12
PRIM1-202ENST00000546761 MUC12Q9UKN1 5478 aa1.83□□□□□ -2.12
PRIM1-202ENST00000546761 KRTAP2-3P0C7H8 128 aa1.8□□□□□ -2.12
PRIM1-202ENST00000546761 KRTAP2-4Q9BYR9 128 aa1.8□□□□□ -2.12
PRIM1-202ENST00000546761 KRTAP19-3Q7Z4W3 81 aa1.79□□□□□ -2.12
PRIM1-202ENST00000546761 MT1LQ93083 61 aa1.79□□□□□ -2.12
PRIM1-202ENST00000546761 MT1GP13640 62 aa1.78□□□□□ -2.12
PRIM1-202ENST00000546761 SPRR2EP22531 72 aa1.77□□□□□ -2.13
PRIM1-202ENST00000546761 SPRR2BP35325 72 aa1.77□□□□□ -2.13
PRIM1-202ENST00000546761 SPRR2AP35326 72 aa1.77□□□□□ -2.13
PRIM1-202ENST00000546761 LCE3DQ9BYE3 92 aa1.75□□□□□ -2.13
PRIM1-202ENST00000546761 MDN1Q9NU22 5596 aa1.74□□□□□ -2.13
PRIM1-202ENST00000546761 KRTAP2-1Q9BYU5 128 aa1.74□□□□□ -2.13
PRIM1-202ENST00000546761 MT1MQ8N339 61 aa1.73□□□□□ -2.13
PRIM1-202ENST00000546761 SPRR2DP22532 72 aa1.71□□□□□ -2.14
PRIM1-202ENST00000546761 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
PRIM1-202ENST00000546761 DSTQ03001 7570 aaKnown RBP1.62□□□□□ -2.15
PRIM1-202ENST00000546761 GPR98Q8WXG9 6306 aa1.58□□□□□ -2.16
PRIM1-202ENST00000546761 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
PRIM1-202ENST00000546761 MT1AP04731 61 aa1.54□□□□□ -2.16
PRIM1-202ENST00000546761 KRTAP12-4P60329 112 aa1.51□□□□□ -2.17
PRIM1-202ENST00000546761 KRTAP6-1Q3LI64 71 aa1.49□□□□□ -2.17
PRIM1-202ENST00000546761 HMCN1Q96RW7 5635 aa1.48□□□□□ -2.17
PRIM1-202ENST00000546761 MT4P47944 62 aa1.48□□□□□ -2.17
PRIM1-202ENST00000546761 KRTAP5-10Q6L8G5 202 aa1.48□□□□□ -2.17
PRIM1-202ENST00000546761 SYNE1Q8NF91 8797 aaKnown RBP1.47□□□□□ -2.17
PRIM1-202ENST00000546761 AHNAK2Q8IVF2 5795 aa1.45□□□□□ -2.18
PRIM1-202ENST00000546761 KRTAP20-2Q3LI61 65 aa1.43□□□□□ -2.18
PRIM1-202ENST00000546761 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
PRIM1-202ENST00000546761 KRTAP6-2Q3LI66 62 aa1.39□□□□□ -2.19
PRIM1-202ENST00000546761 AHNAKQ09666 5890 aaKnown RBP1.23□□□□□ -2.21
PRIM1-202ENST00000546761 MUC5ACP98088 5654 aa1.22□□□□□ -2.21
PRIM1-202ENST00000546761 MUC5BQ9HC84 5762 aaPredicted RBP1.22□□□□□ -2.21
PRIM1-202ENST00000546761 PRM1P04553 51 aa1.06□□□□□ -2.24
PRIM1-202ENST00000546761 PHGR1C9JFL3 82 aa0.88□□□□□ -2.27
PRIM1-202ENST00000546761 KRTAP21-1Q3LI58 79 aa0.67□□□□□ -2.3
PRIM1-202ENST00000546761 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 246 ms