RNA–Protein interactions for RNA: ENST00000546500.5

HNRNPA1-203, Transcript of heterogeneous nuclear ribonucleoprotein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNRNPA1, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1-203ENST00000546500 MACF1Q9UPN3 7388 aaKnown RBP3.57□□□□□ -1.84
HNRNPA1-203ENST00000546500 KRTAP4-7Q9BYR0 210 aa3.57□□□□□ -1.84
HNRNPA1-203ENST00000546500 MT1GP13640 62 aa3.56□□□□□ -1.84
HNRNPA1-203ENST00000546500 KRTAP19-3Q7Z4W3 81 aa3.56□□□□□ -1.84
HNRNPA1-203ENST00000546500 SPRR2FQ96RM1 72 aa3.53□□□□□ -1.84
HNRNPA1-203ENST00000546500 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
HNRNPA1-203ENST00000546500 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.51□□□□□ -1.85
HNRNPA1-203ENST00000546500 SYNE2Q8WXH0 6885 aaKnown RBP3.51□□□□□ -1.85
HNRNPA1-203ENST00000546500 MT1MQ8N339 61 aa3.51□□□□□ -1.85
HNRNPA1-203ENST00000546500 LCE5AQ5TCM9 118 aa3.43□□□□□ -1.86
HNRNPA1-203ENST00000546500 MUC12Q9UKN1 5478 aa3.43□□□□□ -1.86
HNRNPA1-203ENST00000546500 KRTAP2-3P0C7H8 128 aa3.41□□□□□ -1.86
HNRNPA1-203ENST00000546500 KRTAP2-4Q9BYR9 128 aa3.41□□□□□ -1.86
HNRNPA1-203ENST00000546500 KRTAP2-1Q9BYU5 128 aa3.41□□□□□ -1.86
HNRNPA1-203ENST00000546500 KRTAP9-7A8MTY7 169 aa3.41□□□□□ -1.86
HNRNPA1-203ENST00000546500 KRTAP4-3Q9BYR4 195 aa3.4□□□□□ -1.86
HNRNPA1-203ENST00000546500 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
HNRNPA1-203ENST00000546500 LOC100996750A0A140TA64 210 aa3.34□□□□□ -1.88
HNRNPA1-203ENST00000546500 MDN1Q9NU22 5596 aa3.31□□□□□ -1.88
HNRNPA1-203ENST00000546500 SPRR2EP22531 72 aa3.3□□□□□ -1.88
HNRNPA1-203ENST00000546500 SPRR2BP35325 72 aa3.3□□□□□ -1.88
HNRNPA1-203ENST00000546500 SPRR2AP35326 72 aa3.3□□□□□ -1.88
HNRNPA1-203ENST00000546500 LCE1AQ5T7P2 110 aa3.3□□□□□ -1.88
HNRNPA1-203ENST00000546500 KRTAP6-3Q3LI67 103 aa3.24□□□□□ -1.89
HNRNPA1-203ENST00000546500 NEBP20929 6669 aa3.22□□□□□ -1.89
HNRNPA1-203ENST00000546500 SYNE1Q8NF91 8797 aaKnown RBP3.19□□□□□ -1.9
HNRNPA1-203ENST00000546500 OBSCNQ5VST9 7968 aa3.19□□□□□ -1.9
HNRNPA1-203ENST00000546500 SPRR2DP22532 72 aa3.18□□□□□ -1.9
HNRNPA1-203ENST00000546500 MT1AP04731 61 aa3.16□□□□□ -1.9
HNRNPA1-203ENST00000546500 LCE3BQ5TA77 95 aa3.1□□□□□ -1.91
HNRNPA1-203ENST00000546500 KRTAP6-1Q3LI64 71 aa3.09□□□□□ -1.91
HNRNPA1-203ENST00000546500 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.92
HNRNPA1-203ENST00000546500 DSTQ03001 7570 aaKnown RBP3.02□□□□□ -1.93
HNRNPA1-203ENST00000546500 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
HNRNPA1-203ENST00000546500 KRTAP9-4Q9BYQ2 154 aa2.97□□□□□ -1.93
HNRNPA1-203ENST00000546500 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
HNRNPA1-203ENST00000546500 KRTAP4-6Q9BYQ5 205 aa2.92□□□□□ -1.94
HNRNPA1-203ENST00000546500 KRTAP20-1Q3LI63 56 aa2.91□□□□□ -1.94
HNRNPA1-203ENST00000546500 KRTAP4-9Q9BYQ8 210 aa2.91□□□□□ -1.94
HNRNPA1-203ENST00000546500 MT3P25713 68 aa2.88□□□□□ -1.95
HNRNPA1-203ENST00000546500 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
HNRNPA1-203ENST00000546500 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
HNRNPA1-203ENST00000546500 KRTAP5-4Q6L8H1 288 aa2.86□□□□□ -1.95
HNRNPA1-203ENST00000546500 LCE4AQ5TA78 99 aa2.83□□□□□ -1.96
HNRNPA1-203ENST00000546500 KRTAP6-2Q3LI66 62 aa2.82□□□□□ -1.96
HNRNPA1-203ENST00000546500 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
HNRNPA1-203ENST00000546500 KRTAP9-9Q9BYP9 154 aa2.79□□□□□ -1.96
HNRNPA1-203ENST00000546500 KRTAP2-2Q9BYT5 123 aa2.76□□□□□ -1.97
HNRNPA1-203ENST00000546500 MT4P47944 62 aa2.73□□□□□ -1.97
HNRNPA1-203ENST00000546500 KRTAP20-2Q3LI61 65 aa2.68□□□□□ -1.98
HNRNPA1-203ENST00000546500 HMCN1Q96RW7 5635 aa2.66□□□□□ -1.98
HNRNPA1-203ENST00000546500 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
HNRNPA1-203ENST00000546500 LCE1DQ5T752 114 aa2.62□□□□□ -1.99
HNRNPA1-203ENST00000546500 PRM1P04553 51 aa2.59□□□□□ -1.99
HNRNPA1-203ENST00000546500 KRTAP5-3Q6L8H2 238 aa2.55□□□□□ -2
HNRNPA1-203ENST00000546500 AHNAK2Q8IVF2 5795 aa2.51□□□□□ -2.01
HNRNPA1-203ENST00000546500 KRTAP5-10Q6L8G5 202 aa2.49□□□□□ -2.01
HNRNPA1-203ENST00000546500 LCE1EQ5T753 118 aa2.42□□□□□ -2.02
HNRNPA1-203ENST00000546500 GPR98Q8WXG9 6306 aa2.42□□□□□ -2.02
HNRNPA1-203ENST00000546500 KRTAP5-7Q6L8G8 165 aa2.35□□□□□ -2.03
HNRNPA1-203ENST00000546500 KRTAP4-2Q9BYR5 136 aa2.35□□□□□ -2.03
HNRNPA1-203ENST00000546500 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
HNRNPA1-203ENST00000546500 KRTAP4-11Q9BYQ6 195 aa2.27□□□□□ -2.05
HNRNPA1-203ENST00000546500 LCE1FQ5T754 118 aa2.25□□□□□ -2.05
HNRNPA1-203ENST00000546500 LCE1CQ5T751 118 aa2.24□□□□□ -2.05
HNRNPA1-203ENST00000546500 KRTAP5-1Q6L8H4 278 aa2.23□□□□□ -2.05
HNRNPA1-203ENST00000546500 MUC5ACP98088 5654 aa2.22□□□□□ -2.05
HNRNPA1-203ENST00000546500 KRTAP5-8O75690 187 aa2.16□□□□□ -2.06
HNRNPA1-203ENST00000546500 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.11□□□□□ -2.07
HNRNPA1-203ENST00000546500 MUC5BQ9HC84 5762 aaPredicted RBP2.08□□□□□ -2.08
HNRNPA1-203ENST00000546500 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
HNRNPA1-203ENST00000546500 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
HNRNPA1-203ENST00000546500 KRTAP5-11Q6L8G4 156 aa1.96□□□□□ -2.1
HNRNPA1-203ENST00000546500 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
HNRNPA1-203ENST00000546500 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
HNRNPA1-203ENST00000546500 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
HNRNPA1-203ENST00000546500 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 62.9 ms