RNA–Protein interactions for RNA: ENST00000546048.5

MDM2-234, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5

Gene MDM2, Length 363 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-234ENST00000546048 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
MDM2-234ENST00000546048 KRTAP5-5Q701N2 237 aaPredicted RBP1.97□□□□□ -2.09
MDM2-234ENST00000546048 SPTSSBQ8NFR3 76 aa1.97□□□□□ -2.09
MDM2-234ENST00000546048 SPATA8Q6RVD6 105 aa1.96□□□□□ -2.1
MDM2-234ENST00000546048 A0A0D9SG42 100 aa1.95□□□□□ -2.1
MDM2-234ENST00000546048 CCDC179H3BU77 68 aa1.95□□□□□ -2.1
MDM2-234ENST00000546048 KRTAP2-3P0C7H8 128 aa1.95□□□□□ -2.1
MDM2-234ENST00000546048 KRTAP2-4Q9BYR9 128 aa1.95□□□□□ -2.1
MDM2-234ENST00000546048 KRTAP12-1P59990 96 aa1.93□□□□□ -2.1
MDM2-234ENST00000546048 KRTAP19-7Q3SYF9 63 aa1.93□□□□□ -2.1
MDM2-234ENST00000546048 SPRR2DP22532 72 aa1.92□□□□□ -2.1
MDM2-234ENST00000546048 A0A1B0GU33 70 aa1.91□□□□□ -2.1
MDM2-234ENST00000546048 ANAPC13Q9BS18 74 aa1.91□□□□□ -2.1
MDM2-234ENST00000546048 CAMK2N1Q7Z7J9 78 aa1.9□□□□□ -2.11
MDM2-234ENST00000546048 MT1EP04732 61 aa1.89□□□□□ -2.11
MDM2-234ENST00000546048 SPINT4Q6UDR6 99 aa1.89□□□□□ -2.11
MDM2-234ENST00000546048 KRTAP2-1Q9BYU5 128 aa1.89□□□□□ -2.11
MDM2-234ENST00000546048 SERP1Q9Y6X1 66 aa1.89□□□□□ -2.11
MDM2-234ENST00000546048 SEC61GP60059 68 aa1.87□□□□□ -2.11
MDM2-234ENST00000546048 DSTQ03001 7570 aaKnown RBP1.87□□□□□ -2.11
MDM2-234ENST00000546048 KRTAP19-5Q3LI72 72 aa1.87□□□□□ -2.11
MDM2-234ENST00000546048 C10orf95Q9H7T3 257 aa1.86□□□□□ -2.11
MDM2-234ENST00000546048 A0A1B0GU69 56 aa1.85□□□□□ -2.11
MDM2-234ENST00000546048 KRTAP19-3Q7Z4W3 81 aa1.85□□□□□ -2.11
MDM2-234ENST00000546048 LCE1CQ5T751 118 aa1.83□□□□□ -2.12
MDM2-234ENST00000546048 LCE1BQ5T7P3 118 aa1.83□□□□□ -2.12
MDM2-234ENST00000546048 LINC01558Q9Y6Z2 57 aa1.82□□□□□ -2.12
MDM2-234ENST00000546048 SMIM26A0A096LP01 95 aa1.81□□□□□ -2.12
MDM2-234ENST00000546048 MT1LQ93083 61 aa1.81□□□□□ -2.12
MDM2-234ENST00000546048 ATP5EP56381 51 aaPredicted RBP1.79□□□□□ -2.12
MDM2-234ENST00000546048 MT1MQ8N339 61 aa1.79□□□□□ -2.12
MDM2-234ENST00000546048 GPR98Q8WXG9 6306 aa1.79□□□□□ -2.12
MDM2-234ENST00000546048 MT1GP13640 62 aa1.78□□□□□ -2.12
MDM2-234ENST00000546048 TMEM258P61165 79 aa1.78□□□□□ -2.12
MDM2-234ENST00000546048 LCE3DQ9BYE3 92 aa1.78□□□□□ -2.12
MDM2-234ENST00000546048 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
MDM2-234ENST00000546048 PRR15LQ9BU68 103 aa1.76□□□□□ -2.13
MDM2-234ENST00000546048 TNP1P09430 55 aa1.75□□□□□ -2.13
MDM2-234ENST00000546048 UQCR11O14957 56 aa1.73□□□□□ -2.13
MDM2-234ENST00000546048 AHNAK2Q8IVF2 5795 aa1.73□□□□□ -2.13
MDM2-234ENST00000546048 PSPHP1O15172 72 aa1.72□□□□□ -2.13
MDM2-234ENST00000546048 KRTAP12-3P60328 96 aa1.72□□□□□ -2.13
MDM2-234ENST00000546048 MIR22HGQ0VDD5 57 aa1.72□□□□□ -2.13
MDM2-234ENST00000546048 KRTAP5-8O75690 187 aa1.71□□□□□ -2.14
MDM2-234ENST00000546048 MT4P47944 62 aa1.71□□□□□ -2.14
MDM2-234ENST00000546048 Q1T7F1 81 aa1.7□□□□□ -2.14
MDM2-234ENST00000546048 PP632Q6XCG6 107 aa1.7□□□□□ -2.14
MDM2-234ENST00000546048 SYNE1Q8NF91 8797 aaKnown RBP1.68□□□□□ -2.14
MDM2-234ENST00000546048 KRTAP25-1Q3LHN0 102 aa1.66□□□□□ -2.14
MDM2-234ENST00000546048 V9GYY9 64 aa1.63□□□□□ -2.15
MDM2-234ENST00000546048 A6NED7 52 aa1.62□□□□□ -2.15
MDM2-234ENST00000546048 RPS28P62857 69 aaKnown RBP1.61□□□□□ -2.15
MDM2-234ENST00000546048 KRTAP20-2Q3LI61 65 aa1.6□□□□□ -2.15
MDM2-234ENST00000546048 KRTAP5-10Q6L8G5 202 aa1.6□□□□□ -2.15
MDM2-234ENST00000546048 K7ERS5 55 aa1.59□□□□□ -2.15
MDM2-234ENST00000546048 ROMO1P60602 79 aa1.57□□□□□ -2.16
MDM2-234ENST00000546048 CDC42SE1Q9NRR8 79 aa1.56□□□□□ -2.16
MDM2-234ENST00000546048 SPRR5A0A1B0GTR4 108 aa1.55□□□□□ -2.16
MDM2-234ENST00000546048 KRTAP6-1Q3LI64 71 aa1.55□□□□□ -2.16
MDM2-234ENST00000546048 KRTAP5-7Q6L8G8 165 aa1.54□□□□□ -2.16
MDM2-234ENST00000546048 KRTAP12-4P60329 112 aa1.53□□□□□ -2.16
MDM2-234ENST00000546048 MT1AP04731 61 aa1.51□□□□□ -2.17
MDM2-234ENST00000546048 KRTAP6-2Q3LI66 62 aa1.46□□□□□ -2.18
MDM2-234ENST00000546048 MUC19Q7Z5P9 8384 aa1.44□□□□□ -2.18
MDM2-234ENST00000546048 AHNAKQ09666 5890 aaKnown RBP1.43□□□□□ -2.18
MDM2-234ENST00000546048 MUC5ACP98088 5654 aa1.43□□□□□ -2.18
MDM2-234ENST00000546048 MUC5BQ9HC84 5762 aaPredicted RBP1.41□□□□□ -2.18
MDM2-234ENST00000546048 BRK1Q8WUW1 75 aa1.4□□□□□ -2.19
MDM2-234ENST00000546048 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
MDM2-234ENST00000546048 PMAIP1Q13794 54 aa1.31□□□□□ -2.2
MDM2-234ENST00000546048 PRO0628Q9UI54 55 aa1.2□□□□□ -2.22
MDM2-234ENST00000546048 KTN1-AS1Q86SY8 53 aa1.15□□□□□ -2.23
MDM2-234ENST00000546048 LUZP6Q538Z0 58 aa1□□□□□ -2.25
MDM2-234ENST00000546048 PHGR1C9JFL3 82 aa0.93□□□□□ -2.26
MDM2-234ENST00000546048 PRM1P04553 51 aa0.83□□□□□ -2.28
MDM2-234ENST00000546048 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
MDM2-234ENST00000546048 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
MDM2-234ENST00000546048 INE1O15225 51 aa0.62□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 104 ms