RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 LCE3AQ5TA76 89 aa4.07□□□□□ -1.76
PAAF1-216ENST00000546039 KRTAP4-12Q9BQ66 201 aa4.06□□□□□ -1.76
PAAF1-216ENST00000546039 LCE3BQ5TA77 95 aa4.05□□□□□ -1.76
PAAF1-216ENST00000546039 MDN1Q9NU22 5596 aa4.03□□□□□ -1.76
PAAF1-216ENST00000546039 KRTAP15-1Q3LI76 137 aa4.02□□□□□ -1.77
PAAF1-216ENST00000546039 KRTAP19-7Q3SYF9 63 aa4.02□□□□□ -1.77
PAAF1-216ENST00000546039 KRTAP19-5Q3LI72 72 aa4□□□□□ -1.77
PAAF1-216ENST00000546039 GPR98Q8WXG9 6306 aa3.99□□□□□ -1.77
PAAF1-216ENST00000546039 MT1EP04732 61 aa3.98□□□□□ -1.77
PAAF1-216ENST00000546039 SPRR2EP22531 72 aa3.97□□□□□ -1.77
PAAF1-216ENST00000546039 SPRR2BP35325 72 aa3.97□□□□□ -1.77
PAAF1-216ENST00000546039 SPRR2AP35326 72 aa3.97□□□□□ -1.77
PAAF1-216ENST00000546039 LCE1AQ5T7P2 110 aa3.95□□□□□ -1.78
PAAF1-216ENST00000546039 PP632Q6XCG6 107 aa3.95□□□□□ -1.78
PAAF1-216ENST00000546039 KRTAP9-9Q9BYP9 154 aa3.95□□□□□ -1.78
PAAF1-216ENST00000546039 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
PAAF1-216ENST00000546039 KRTAP2-3P0C7H8 128 aa3.93□□□□□ -1.78
PAAF1-216ENST00000546039 KRTAP2-4Q9BYR9 128 aa3.93□□□□□ -1.78
PAAF1-216ENST00000546039 KRTAP12-3P60328 96 aa3.92□□□□□ -1.78
PAAF1-216ENST00000546039 KRTAP19-3Q7Z4W3 81 aa3.88□□□□□ -1.79
PAAF1-216ENST00000546039 MT1LQ93083 61 aa3.85□□□□□ -1.79
PAAF1-216ENST00000546039 SPRR2DP22532 72 aa3.84□□□□□ -1.79
PAAF1-216ENST00000546039 LCE5AQ5TCM9 118 aa3.84□□□□□ -1.79
PAAF1-216ENST00000546039 MT1GP13640 62 aa3.83□□□□□ -1.8
PAAF1-216ENST00000546039 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
PAAF1-216ENST00000546039 KRTAP2-2Q9BYT5 123 aa3.78□□□□□ -1.8
PAAF1-216ENST00000546039 KRTAP2-1Q9BYU5 128 aa3.78□□□□□ -1.8
PAAF1-216ENST00000546039 MT1MQ8N339 61 aa3.77□□□□□ -1.81
PAAF1-216ENST00000546039 KRTAP4-7Q9BYR0 210 aa3.76□□□□□ -1.81
PAAF1-216ENST00000546039 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
PAAF1-216ENST00000546039 LUZP6Q538Z0 58 aa3.69□□□□□ -1.82
PAAF1-216ENST00000546039 KRTAP4-9Q9BYQ8 210 aa3.67□□□□□ -1.82
PAAF1-216ENST00000546039 LCE4AQ5TA78 99 aa3.66□□□□□ -1.82
PAAF1-216ENST00000546039 LCE3CQ5T5A8 94 aa3.64□□□□□ -1.83
PAAF1-216ENST00000546039 KRTAP4-3Q9BYR4 195 aa3.63□□□□□ -1.83
PAAF1-216ENST00000546039 KRTAP4-2Q9BYR5 136 aa3.6□□□□□ -1.83
PAAF1-216ENST00000546039 SPRR5A0A1B0GTR4 108 aa3.55□□□□□ -1.84
PAAF1-216ENST00000546039 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
PAAF1-216ENST00000546039 DSTQ03001 7570 aaKnown RBP3.51□□□□□ -1.85
PAAF1-216ENST00000546039 AHNAK2Q8IVF2 5795 aa3.47□□□□□ -1.85
PAAF1-216ENST00000546039 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
PAAF1-216ENST00000546039 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
PAAF1-216ENST00000546039 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.86
PAAF1-216ENST00000546039 KRTAP9-6A8MVA2 160 aa3.4□□□□□ -1.87
PAAF1-216ENST00000546039 KRTAP5-10Q6L8G5 202 aa3.35□□□□□ -1.87
PAAF1-216ENST00000546039 KRTAP5-7Q6L8G8 165 aa3.33□□□□□ -1.88
PAAF1-216ENST00000546039 MT4P47944 62 aa3.31□□□□□ -1.88
PAAF1-216ENST00000546039 MT1AP04731 61 aa3.29□□□□□ -1.88
PAAF1-216ENST00000546039 MT3P25713 68 aa3.29□□□□□ -1.88
PAAF1-216ENST00000546039 KRTAP12-4P60329 112 aa3.26□□□□□ -1.89
PAAF1-216ENST00000546039 INE1O15225 51 aa3.24□□□□□ -1.89
PAAF1-216ENST00000546039 KRTAP6-1Q3LI64 71 aa3.24□□□□□ -1.89
PAAF1-216ENST00000546039 KRTAP5-3Q6L8H2 238 aa3.21□□□□□ -1.9
PAAF1-216ENST00000546039 KRTAP20-2Q3LI61 65 aa3.19□□□□□ -1.9
PAAF1-216ENST00000546039 SYNE1Q8NF91 8797 aaKnown RBP3.15□□□□□ -1.91
PAAF1-216ENST00000546039 AHNAKQ09666 5890 aaKnown RBP3.1□□□□□ -1.91
PAAF1-216ENST00000546039 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
PAAF1-216ENST00000546039 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
PAAF1-216ENST00000546039 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
PAAF1-216ENST00000546039 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
PAAF1-216ENST00000546039 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
PAAF1-216ENST00000546039 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
PAAF1-216ENST00000546039 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
PAAF1-216ENST00000546039 LCE1EQ5T753 118 aa2.68□□□□□ -1.98
PAAF1-216ENST00000546039 KRTAP5-1Q6L8H4 278 aa2.66□□□□□ -1.98
PAAF1-216ENST00000546039 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
PAAF1-216ENST00000546039 LCE3EQ5T5B0 92 aa2.59□□□□□ -1.99
PAAF1-216ENST00000546039 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
PAAF1-216ENST00000546039 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
PAAF1-216ENST00000546039 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.4□□□□□ -2.03
PAAF1-216ENST00000546039 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
PAAF1-216ENST00000546039 PRM1P04553 51 aa2.19□□□□□ -2.06
PAAF1-216ENST00000546039 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
PAAF1-216ENST00000546039 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
PAAF1-216ENST00000546039 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
PAAF1-216ENST00000546039 MUC19Q7Z5P9 8384 aa1.61□□□□□ -2.15
PAAF1-216ENST00000546039 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
PAAF1-216ENST00000546039 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 22.1 ms