RNA–Protein interactions for RNA: ENST00000545930.5

DDB1-225, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,278 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-225ENST00000545930 KRTAP12-2P59991 146 aa4.08□□□□□ -1.76
DDB1-225ENST00000545930 FSIP2Q5CZC0 6907 aa4.06□□□□□ -1.76
DDB1-225ENST00000545930 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
DDB1-225ENST00000545930 MT1XP80297 61 aa4.02□□□□□ -1.77
DDB1-225ENST00000545930 BRK1Q8WUW1 75 aa4.01□□□□□ -1.77
DDB1-225ENST00000545930 FCGBPQ9Y6R7 5405 aaPredicted RBP3.98□□□□□ -1.77
DDB1-225ENST00000545930 TNP1P09430 55 aa3.91□□□□□ -1.78
DDB1-225ENST00000545930 C10orf95Q9H7T3 257 aa3.89□□□□□ -1.79
DDB1-225ENST00000545930 ROMO1P60602 79 aa3.87□□□□□ -1.79
DDB1-225ENST00000545930 KRTAP25-1Q3LHN0 102 aa3.85□□□□□ -1.79
DDB1-225ENST00000545930 PRO0628Q9UI54 55 aa3.84□□□□□ -1.79
DDB1-225ENST00000545930 LCE3CQ5T5A8 94 aa3.83□□□□□ -1.8
DDB1-225ENST00000545930 PMAIP1Q13794 54 aa3.82□□□□□ -1.8
DDB1-225ENST00000545930 MACF1Q9UPN3 7388 aaKnown RBP3.8□□□□□ -1.8
DDB1-225ENST00000545930 A0A0A0MQY5 61 aa3.79□□□□□ -1.8
DDB1-225ENST00000545930 KRTAP8-1Q8IUC2 63 aa3.75□□□□□ -1.81
DDB1-225ENST00000545930 KRTAP4-3Q9BYR4 195 aa3.75□□□□□ -1.81
DDB1-225ENST00000545930 KMT2DO14686 5537 aa3.74□□□□□ -1.81
DDB1-225ENST00000545930 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
DDB1-225ENST00000545930 KRTAP6-3Q3LI67 103 aa3.71□□□□□ -1.82
DDB1-225ENST00000545930 PP632Q6XCG6 107 aa3.71□□□□□ -1.82
DDB1-225ENST00000545930 LCE3AQ5TA76 89 aa3.69□□□□□ -1.82
DDB1-225ENST00000545930 SYNE2Q8WXH0 6885 aaKnown RBP3.64□□□□□ -1.83
DDB1-225ENST00000545930 SPRR2FQ96RM1 72 aa3.63□□□□□ -1.83
DDB1-225ENST00000545930 KRTAP19-5Q3LI72 72 aa3.6□□□□□ -1.83
DDB1-225ENST00000545930 KRTAP12-3P60328 96 aa3.58□□□□□ -1.84
DDB1-225ENST00000545930 KRTAP19-7Q3SYF9 63 aa3.58□□□□□ -1.84
DDB1-225ENST00000545930 KTN1-AS1Q86SY8 53 aa3.58□□□□□ -1.84
DDB1-225ENST00000545930 MUC12Q9UKN1 5478 aa3.57□□□□□ -1.84
DDB1-225ENST00000545930 MT1EP04732 61 aa3.55□□□□□ -1.84
DDB1-225ENST00000545930 KRTAP5-2Q701N4 177 aa3.52□□□□□ -1.85
DDB1-225ENST00000545930 MDN1Q9NU22 5596 aa3.51□□□□□ -1.85
DDB1-225ENST00000545930 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
DDB1-225ENST00000545930 SPRR2EP22531 72 aa3.5□□□□□ -1.85
DDB1-225ENST00000545930 SPRR2BP35325 72 aa3.5□□□□□ -1.85
DDB1-225ENST00000545930 SPRR2AP35326 72 aa3.5□□□□□ -1.85
DDB1-225ENST00000545930 PRAC1Q96KF2 57 aa3.49□□□□□ -1.85
DDB1-225ENST00000545930 MT1GP13640 62 aa3.47□□□□□ -1.85
DDB1-225ENST00000545930 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
DDB1-225ENST00000545930 KRTAP19-3Q7Z4W3 81 aa3.47□□□□□ -1.85
DDB1-225ENST00000545930 MT1LQ93083 61 aa3.45□□□□□ -1.86
DDB1-225ENST00000545930 SPRR2DP22532 72 aa3.39□□□□□ -1.87
DDB1-225ENST00000545930 NEBP20929 6669 aa3.39□□□□□ -1.87
DDB1-225ENST00000545930 MT1MQ8N339 61 aa3.35□□□□□ -1.87
DDB1-225ENST00000545930 KRTAP5-5Q701N2 237 aaPredicted RBP3.31□□□□□ -1.88
DDB1-225ENST00000545930 KRTAP2-3P0C7H8 128 aa3.3□□□□□ -1.88
DDB1-225ENST00000545930 KRTAP2-4Q9BYR9 128 aa3.3□□□□□ -1.88
DDB1-225ENST00000545930 DSTQ03001 7570 aaKnown RBP3.27□□□□□ -1.89
DDB1-225ENST00000545930 KRTAP20-1Q3LI63 56 aa3.26□□□□□ -1.89
DDB1-225ENST00000545930 KRTAP2-1Q9BYU5 128 aa3.22□□□□□ -1.89
DDB1-225ENST00000545930 LCE1CQ5T751 118 aa3.2□□□□□ -1.9
DDB1-225ENST00000545930 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
DDB1-225ENST00000545930 SPRR5A0A1B0GTR4 108 aa3.12□□□□□ -1.91
DDB1-225ENST00000545930 LUZP6Q538Z0 58 aa3.03□□□□□ -1.92
DDB1-225ENST00000545930 KRTAP5-8O75690 187 aa2.96□□□□□ -1.94
DDB1-225ENST00000545930 MT1AP04731 61 aa2.96□□□□□ -1.94
DDB1-225ENST00000545930 KRTAP12-4P60329 112 aa2.95□□□□□ -1.94
DDB1-225ENST00000545930 SYNE1Q8NF91 8797 aaKnown RBP2.91□□□□□ -1.94
DDB1-225ENST00000545930 MT4P47944 62 aa2.9□□□□□ -1.95
DDB1-225ENST00000545930 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
DDB1-225ENST00000545930 HMCN1Q96RW7 5635 aa2.85□□□□□ -1.95
DDB1-225ENST00000545930 KRTAP20-2Q3LI61 65 aa2.81□□□□□ -1.96
DDB1-225ENST00000545930 GPR98Q8WXG9 6306 aa2.74□□□□□ -1.97
DDB1-225ENST00000545930 KRTAP6-2Q3LI66 62 aa2.7□□□□□ -1.98
DDB1-225ENST00000545930 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
DDB1-225ENST00000545930 AHNAK2Q8IVF2 5795 aa2.65□□□□□ -1.99
DDB1-225ENST00000545930 KRTAP5-7Q6L8G8 165 aa2.59□□□□□ -1.99
DDB1-225ENST00000545930 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
DDB1-225ENST00000545930 KRTAP5-10Q6L8G5 202 aa2.51□□□□□ -2.01
DDB1-225ENST00000545930 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
DDB1-225ENST00000545930 INE1O15225 51 aa2.32□□□□□ -2.04
DDB1-225ENST00000545930 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
DDB1-225ENST00000545930 MUC5BQ9HC84 5762 aaPredicted RBP2.14□□□□□ -2.07
DDB1-225ENST00000545930 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
DDB1-225ENST00000545930 PRM1P04553 51 aa1.96□□□□□ -2.1
DDB1-225ENST00000545930 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
DDB1-225ENST00000545930 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
DDB1-225ENST00000545930 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 72 ms