RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 KRTAP4-8A0A0G2JLE6 195 aa4.15□□□□□ -1.74
DDB1-224ENST00000545894 KRTAP4-8Q9BYQ9 185 aa4.15□□□□□ -1.74
DDB1-224ENST00000545894 KRTAP9-7A8MTY7 169 aa4.15□□□□□ -1.75
DDB1-224ENST00000545894 KRTAP6-3Q3LI67 103 aa4.11□□□□□ -1.75
DDB1-224ENST00000545894 KRTAP9-6A8MVA2 160 aa4.06□□□□□ -1.76
DDB1-224ENST00000545894 KRTAP5-9P26371 169 aa4.05□□□□□ -1.76
DDB1-224ENST00000545894 KRTAP19-7Q3SYF9 63 aa4.01□□□□□ -1.77
DDB1-224ENST00000545894 SPRR2FQ96RM1 72 aa4.01□□□□□ -1.77
DDB1-224ENST00000545894 MUC12Q9UKN1 5478 aa3.99□□□□□ -1.77
DDB1-224ENST00000545894 KRTAP2-3P0C7H8 128 aa3.98□□□□□ -1.77
DDB1-224ENST00000545894 KRTAP2-4Q9BYR9 128 aa3.98□□□□□ -1.77
DDB1-224ENST00000545894 KRTAP2-1Q9BYU5 128 aa3.98□□□□□ -1.77
DDB1-224ENST00000545894 KRTAP19-4Q3LI73 84 aa3.97□□□□□ -1.77
DDB1-224ENST00000545894 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
DDB1-224ENST00000545894 KRTAP4-7Q9BYR0 210 aa3.96□□□□□ -1.78
DDB1-224ENST00000545894 MDN1Q9NU22 5596 aa3.94□□□□□ -1.78
DDB1-224ENST00000545894 LCE3BQ5TA77 95 aa3.92□□□□□ -1.78
DDB1-224ENST00000545894 MT1LQ93083 61 aa3.92□□□□□ -1.78
DDB1-224ENST00000545894 MT1EP04732 61 aa3.9□□□□□ -1.79
DDB1-224ENST00000545894 SPRR2EP22531 72 aa3.88□□□□□ -1.79
DDB1-224ENST00000545894 SPRR2BP35325 72 aa3.88□□□□□ -1.79
DDB1-224ENST00000545894 SPRR2AP35326 72 aa3.88□□□□□ -1.79
DDB1-224ENST00000545894 LCE1AQ5T7P2 110 aa3.88□□□□□ -1.79
DDB1-224ENST00000545894 KRTAP9-9Q9BYP9 154 aa3.87□□□□□ -1.79
DDB1-224ENST00000545894 KRTAP9-4Q9BYQ2 154 aa3.87□□□□□ -1.79
DDB1-224ENST00000545894 NEBP20929 6669 aa3.85□□□□□ -1.79
DDB1-224ENST00000545894 LCE4AQ5TA78 99 aa3.84□□□□□ -1.79
DDB1-224ENST00000545894 KRTAP19-3Q7Z4W3 81 aa3.79□□□□□ -1.8
DDB1-224ENST00000545894 LCE5AQ5TCM9 118 aa3.77□□□□□ -1.81
DDB1-224ENST00000545894 SPRR2DP22532 72 aa3.74□□□□□ -1.81
DDB1-224ENST00000545894 MT1GP13640 62 aa3.73□□□□□ -1.81
DDB1-224ENST00000545894 MT1MQ8N339 61 aa3.69□□□□□ -1.82
DDB1-224ENST00000545894 KRTAP4-3Q9BYR4 195 aa3.68□□□□□ -1.82
DDB1-224ENST00000545894 KRTAP20-1Q3LI63 56 aa3.66□□□□□ -1.82
DDB1-224ENST00000545894 LCE1DQ5T752 114 aa3.64□□□□□ -1.83
DDB1-224ENST00000545894 DSTQ03001 7570 aaKnown RBP3.59□□□□□ -1.83
DDB1-224ENST00000545894 KRTAP12-4P60329 112 aa3.55□□□□□ -1.84
DDB1-224ENST00000545894 KRTAP2-2Q9BYT5 123 aa3.55□□□□□ -1.84
DDB1-224ENST00000545894 KRTAP5-3Q6L8H2 238 aa3.54□□□□□ -1.84
DDB1-224ENST00000545894 KRTAP4-9Q9BYQ8 210 aa3.51□□□□□ -1.85
DDB1-224ENST00000545894 KRTAP4-2Q9BYR5 136 aa3.46□□□□□ -1.85
DDB1-224ENST00000545894 KRTAP4-11Q9BYQ6 195 aa3.43□□□□□ -1.86
DDB1-224ENST00000545894 MT1AP04731 61 aa3.37□□□□□ -1.87
DDB1-224ENST00000545894 KRTAP5-5Q701N2 237 aaPredicted RBP3.36□□□□□ -1.87
DDB1-224ENST00000545894 KRTAP5-4Q6L8H1 288 aa3.33□□□□□ -1.88
DDB1-224ENST00000545894 KRTAP6-1Q3LI64 71 aa3.31□□□□□ -1.88
DDB1-224ENST00000545894 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
DDB1-224ENST00000545894 MT4P47944 62 aa3.26□□□□□ -1.89
DDB1-224ENST00000545894 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
DDB1-224ENST00000545894 SYNE1Q8NF91 8797 aaKnown RBP3.23□□□□□ -1.89
DDB1-224ENST00000545894 HMCN1Q96RW7 5635 aa3.2□□□□□ -1.9
DDB1-224ENST00000545894 PRM1P04553 51 aa3.15□□□□□ -1.91
DDB1-224ENST00000545894 KRTAP20-2Q3LI61 65 aa3.13□□□□□ -1.91
DDB1-224ENST00000545894 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
DDB1-224ENST00000545894 KRTAP5-2Q701N4 177 aa2.98□□□□□ -1.93
DDB1-224ENST00000545894 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
DDB1-224ENST00000545894 MT3P25713 68 aa2.95□□□□□ -1.94
DDB1-224ENST00000545894 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
DDB1-224ENST00000545894 GPR98Q8WXG9 6306 aa2.85□□□□□ -1.95
DDB1-224ENST00000545894 OBSCNQ5VST9 7968 aa2.77□□□□□ -1.97
DDB1-224ENST00000545894 KRTAP5-7Q6L8G8 165 aa2.69□□□□□ -1.98
DDB1-224ENST00000545894 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
DDB1-224ENST00000545894 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
DDB1-224ENST00000545894 KRTAP5-1Q6L8H4 278 aa2.62□□□□□ -1.99
DDB1-224ENST00000545894 LCE1EQ5T753 118 aa2.59□□□□□ -1.99
DDB1-224ENST00000545894 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
DDB1-224ENST00000545894 MUC5ACP98088 5654 aa2.54□□□□□ -2
DDB1-224ENST00000545894 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
DDB1-224ENST00000545894 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
DDB1-224ENST00000545894 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
DDB1-224ENST00000545894 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
DDB1-224ENST00000545894 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
DDB1-224ENST00000545894 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
DDB1-224ENST00000545894 KRTAP4-4Q9BYR3 166 aa2.07□□□□□ -2.08
DDB1-224ENST00000545894 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
DDB1-224ENST00000545894 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
DDB1-224ENST00000545894 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
DDB1-224ENST00000545894 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 107.2 ms